mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 41 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6142065 | 72 (1.340) | 3 (0.060) | 3/244 | NT | 4.6% | coding (1801/3159 nt) | cusA | CzcA family RND family copper transporter |
| ? | NC_002947 | = 6142115 | 57 (1.150) | coding (1851/3159 nt) | cusA | CzcA family RND family copper transporter | |||||
| * | ? | NC_002947 | 6133507 = | 82 (1.520) | 3 (0.060) | 3/258 | NT | 3.7% | coding (346/2010 nt) | copA‑II | copper resistance protein A |
| ? | NC_002947 | 6133552 = | 77 (1.460) | coding (301/2010 nt) | copA‑II | copper resistance protein A | |||||
| * | ? | NC_002947 | = 5991452 | 76 (1.410) | 3 (0.060) | 3/256 | NT | 4.0% | coding (558/912 nt) | PP_5249 | LysR family transcriptional regulator |
| ? | NC_002947 | = 5991485 | 69 (1.320) | coding (591/912 nt) | PP_5249 | LysR family transcriptional regulator | |||||
| * | ? | NC_002947 | 5892876 = | 79 (1.470) | 3 (0.060) | 3/254 | NT | 3.9% | coding (394/582 nt) | PP_5167 | hypothetical protein |
| ? | NC_002947 | 5892915 = | 71 (1.370) | coding (355/582 nt) | PP_5167 | hypothetical protein | |||||
| * | ? | NC_002947 | 5878367 = | 67 (1.240) | 3 (0.060) | 3/252 | NT | 4.1% | coding (630/921 nt) | PP_5152 | hypothetical protein |
| ? | NC_002947 | 5878440 = | 76 (1.480) | coding (557/921 nt) | PP_5152 | hypothetical protein | |||||
| * | ? | NC_002947 | = 5834927 | 67 (1.240) | 3 (0.060) | 3/248 | NT | 4.5% | coding (1205/1491 nt) | PP_5113 | Zn‑dependent peptidase |
| ? | NC_002947 | = 5834977 | 63 (1.250) | coding (1255/1491 nt) | PP_5113 | Zn‑dependent peptidase | |||||
| * | ? | NC_002947 | 5769915 = | 66 (1.230) | 3 (0.060) | 3/260 | NT | 4.6% | coding (957/4716 nt) | PP_5060 | hypothetical protein |
| ? | NC_002947 | 5769959 = | 59 (1.110) | coding (913/4716 nt) | PP_5060 | hypothetical protein | |||||
| * | ? | NC_002947 | 5743336 = | 48 (0.890) | 3 (0.060) | 3/238 | NT | 6.6% | intergenic (‑169/+78) | fbp/glgP | class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase |
| ? | NC_002947 | 5743390 = | 42 (0.870) | intergenic (‑223/+24) | fbp/glgP | class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase | |||||
| * | ? | NC_002947 | 5734339 = | 71 (1.320) | 3 (0.060) | 3/246 | NT | 4.9% | coding (1325/1533 nt) | hutH | histidine ammonia‑lyase |
| ? | NC_002947 | 5734410 = | 50 (1.000) | coding (1254/1533 nt) | hutH | histidine ammonia‑lyase | |||||
| * | ? | NC_002947 | = 5673897 | 85 (1.580) | 3 (0.060) | 3/250 | NT | 3.5% | coding (1140/1881 nt) | rhlE‑II | ATP‑dependent RNA helicase |
| ? | NC_002947 | = 5673920 | 85 (1.670) | coding (1163/1881 nt) | rhlE‑II | ATP‑dependent RNA helicase | |||||