New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2301453 = | 0 (0.000) | 33 (1.110) | 25/284 | 0.3 | 100% | intergenic (‑97/‑234) | sbcD/PP_5497 | exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein |
? | NC_002947 | 2925429 = | NA (NA) | intergenic (‑177/+388) | PP_2563/PP_2564 | antibiotic biosynthesis protein/quercetin 2,3‑dioxygenase |
ATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2301601‑2301453 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAAT > NC_002947/2925429‑2925573 ATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGA < 5:141764/148‑1 TCCATGTGGGAGCGGGCGCGCCGGCGAACACCGGCGCAGCCGGTGCCATGCAGCGAGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTC < 3:53730/147‑1 CCATGTGGGTGCGGGGGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATGCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCG < 2:91849/148‑1 TGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCCTGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCGTCCGGGC > 6:97733/1‑148 GGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTC < 6:71815/148‑1 GCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAACCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGC > 2:92167/1‑148 CCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGC > 6:157267/1‑147 AACACCGGCGCAGCCGGTGCCATGCACCTCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAG < 1:38691/148‑1 AGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGA < 3:162307/148‑1 TGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGGGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCT > 2:128960/1‑147 TGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCT > 2:19379/1‑147 CCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACT < 1:162033/148‑1 GTTGTATTCTTCGCGGGCACGACCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATTCGCAGTTCTATGAGATATCACCCAGCCCTTCCGGGCTGCTCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACA < 1:115785/148‑1 GTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGAT > 8:62693/1‑121 GTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAACAAACAGGATGCGCATGACGTCAGATCTGCACTGACA > 1:23584/1‑148 TTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG < 7:62693/121‑1 TCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGAT < 3:5262/148‑1 TTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGATATCACCCAGCCCTTCCGGGCTGCGATGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGAT > 6:78554/1‑146 GCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAG > 3:48454/1‑147 GGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAA > 4:8268/1‑148 GCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAACCAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATT > 4:22134/1‑148 TCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGA > 3:114733/1‑148 TCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCACCCCTTCCGGGCTGCGCTCTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTAGCCGA > 6:3672/1‑148 TGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGG > 3:6122/1‑148 CAGTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGC > 1:158523/1‑148 GTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGCTCTGCACTGCCATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCC > 2:131849/1‑147 GTAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCa > 6:23897/1‑146 TAAGTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGA > 1:174345/1‑148 GTGATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAACAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATA < 2:23584/148‑1 ATGCGCAGTTCTATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTT > 1:31283/1‑148 ATGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACT > 8:48117/1‑135 TGAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTT < 7:48117/135‑1 GAGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCA > 5:48880/1‑148 AGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAA > 6:159607/1‑148 GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAAT < 5:67357/148‑1 GAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAA < 6:143627/147‑1 ATGCCAGGCAAGCGTGGTCCATGTGGGAGCGGGCGCGCCCGCGAACACCGGCGCAGCCGGTGCCATGCACCGCGTTGGATTCTTCGCGGGCACGCCCGCTCCCACAGGGTCCCTGCTAAATCAGTAAGTGATGCGCAGTTCTATGAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2301601‑2301453 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCCAAT > NC_002947/2925429‑2925573 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |