Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	6,013,885	T→C	intergenic (+90/+20)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	6,013,885	0	T	C	100.0%	74.7 / NA	23	intergenic (+90/+20)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (7/16);  total (7/16)

GGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATC  >  NC_002947/6013747‑6014027                                                                                                                                           |                                                                                                                                               ggCCCGGGTGAAGTCGCTGGAAGGGGGTGGGGGCAGCTTCAGCTAATAAACGCGCCACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGc                                                                                                                                       <  8:9153/148‑1 (MQ=37)   cccGGGTGAAGACGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGc                                                                                                                                       <  6:10853/146‑1 (MQ=255)             gacGCTGGAAGGTCGGGTGGCCAGCTTCAGCGACAACCCGCGACACCTGCATCGCGGGCACGCCCGCTCCCACCGGTGCAGCACAGGTCTCGAACGCTGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCtttt                                                                                                                           <  5:122440/146‑1 (MQ=25)                  tGGAAGGTGGTGTGGGCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCGGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTg                                                                                                                      <  8:140364/148‑1 (MQ=255)                      aGGGGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGtt                                                                                                                   <  3:47736/147‑1 (MQ=255)                                   aGCTTCATCGAAAAACCGCGCCACCGGCTGCGCGGGCCGCCCCGCGCCCACTGGTGCCGCACCGGCCGCCAACGCTGGGCCGACCCGGTGGTCGGGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGc                                                                                                     <  2:158068/148‑1 (MQ=255)                                         aTCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCcaaca                                                                                                <  6:74760/147‑1 (MQ=255)                                                  aCGCTACACGTGCTGCGGGGGCACGCCGGGGCCCACCGGTGCAGCACTGGGCTCTACCGCGGTGCCTTACCTGGGGTAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCGGCCAGCCCCGCCAACAACAAGCGCTg                                                                                      <  2:57159/148‑1 (MQ=255)                                                               ttCGCGGGCTCGGCCGGTCCCACAGGTGCTGCACAGGTCTCGACCGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGGCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGtgctt                                                                           <  5:169433/146‑1 (MQ=37)                                                                   cgGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTaa                                                                     <  8:151715/148‑1 (MQ=255)                                                                    gggCACGCCCGCTCCCACAGGTTCAGCACAGGGCTCGCACGCTGTGCCGGACCGGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCGTTTATCTGGTTTCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGGTCTTCTTTAAg                                                                    >  2:76296/1‑148 (MQ=37)                                                                          gCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCCACCCTTTTATCTGGTTGCCGCCAGCCCAGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTg                                                              >  6:136426/1‑148 (MQ=255)                                                                                   cacaGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGcc                                                      >  5:42815/1‑147 (MQ=255)                                                                                      aGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCaa                                                  >  3:11699/1‑148 (MQ=255)                                                                                           cagcaCAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCa                                             <  5:34626/148‑1 (MQ=255)                                                                                                        gAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTg                                >  4:102092/1‑148 (MQ=255)                                                                                                            gCTGTGCCTTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCtt                            <  6:19018/148‑1 (MQ=255)                                                                                                            gCTGTGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCtt                            <  7:88848/148‑1 (MQ=255)                                                                                                                 gCCGTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCCGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATa                       >  6:60130/1‑148 (MQ=255)                                                                                                                    gTACCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAccc                    >  6:137127/1‑148 (MQ=255)                                                                                                                                 cGGGCACGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCGGGTAAAGTTCTTCTTTATGCCCCTGCGGCTGCCCCTACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGt       <  4:2821/148‑1 (MQ=255)                                                                                                                                  gggTGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTg      <  6:100249/148‑1 (MQ=255)                                                                                                                                      gTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATc  <  4:161521/148‑1 (MQ=255)                                                                                                                                           |                                                                                                                                               GGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTACCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATC  >  NC_002947/6013747‑6014027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑