| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 307,866 | +C | intergenic (+881/‑988) | hslO → / → PP_0254 | molecular chaperone HslO/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 307,865 | 1 | . | C | 98.7% | 256.3 / ‑3.4 | 77 | intergenic (+880/‑989) | hslO/PP_0254 | molecular chaperone HslO/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (1/0); new base C (35/41); total (36/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.95e-01 | |||||||||||
CCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAG‑CGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAGTACT > NC_002947/307721‑308008 | ccATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑TGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAG‑ccgt > 7:266423/1‑146 (MQ=255)ccATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAG‑ccg > 5:87271/1‑146 (MQ=255) cATGTTCTCGGTGCATAACTTCCTGCTGCCGGCTGCCGAAGTACTGCCTATGCACTGCGCGTCCAACATCGG‑CGAAGAAGGCGATGTGAGCTTGTTCTTCGGCCTGTCCGGCAGTGGCAAGACTACC‑CTTTCGGCTGACGAAAG‑ccgtt < 7:269170/149‑5 (MQ=255) tGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTAc < 4:325960/149‑1 (MQ=255) ggTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCGACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATc > 6:353801/1‑148 (MQ=255) ggTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCt < 3:274370/144‑1 (MQ=255) gTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCgg > 2:351173/1‑149 (MQ=255) gCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGt < 5:138018/148‑1 (MQ=255) cAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTga < 8:148127/149‑1 (MQ=255) aGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTACGGCTGACGAAAGCCGTTACCTGATCGGTgac > 4:168035/1‑149 (MQ=255) gAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTgacg > 4:359771/1‑149 (MQ=255) ccTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACTTCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGAcgacga > 5:240165/1‑147 (MQ=255) ctgctgCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGc < 8:74416/148‑1 (MQ=255) ctgccggctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACgg > 3:152187/1‑149 (MQ=255) ccggctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTg > 1:265985/1‑149 (MQ=255) ggctgccgATGTACTTCCTATGCACTGCGCGGCCAACATCGG‑AGAAGAAGTCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGt < 4:16034/145‑1 (MQ=255) ggctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTgg < 6:87271/148‑1 (MQ=255) gcctgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGt > 3:16034/3‑145 (MQ=255) tgccgATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGc > 1:239092/1‑148 (MQ=255) ccgATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGaa < 4:152187/149‑1 (MQ=255) cgATGTACTGCCTATGCACTGCGCGGCCAACATCGGACGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCg > 1:265746/1‑147 (MQ=255) cgATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAg > 3:286744/1‑149 (MQ=255) gATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAgg > 1:391079/1‑149 (MQ=255) aCTGCCTATGCACTGCGCGGCCAACTTCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGtt < 6:240165/148‑1 (MQ=255) aCTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGtt > 5:249652/1‑148 (MQ=255) ccTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCtt > 8:204836/1‑149 (MQ=255) aTGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCaa > 1:390184/1‑149 (MQ=255) tGCACTGCGCGGCCAACATCGG‑CTATGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGTGCACGGTTGGGGCGAAGGCGTTGTCTTCaa < 1:238344/148‑1 (MQ=255) tGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCaa < 1:57871/148‑1 (MQ=255) aCTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATg > 4:43444/1‑149 (MQ=255) cgcgGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCg < 7:24607/131‑1 (MQ=255) cgcgGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCg > 8:24607/1‑131 (MQ=255) cgcgGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGaa < 4:286744/148‑1 (MQ=255) cgcgGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAg > 2:134026/1‑149 (MQ=255) cgcgGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTCCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGaa < 3:168035/148‑1 (MQ=255) gCCAACATCGG‑TGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAggcgg < 8:266423/149‑1 (MQ=255) ccAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAggcggc > 1:193069/1‑149 (MQ=255) aaCATGGG‑CGAAGAAGTCGTTGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGgctg < 8:59817/149‑1 (MQ=255) aaCATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAggcggc > 5:259055/1‑147 (MQ=255) aaCATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGgctg > 4:232237/1‑149 (MQ=255) aaCATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGgctg > 3:188146/1‑149 (MQ=255) gg‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGc > 8:86727/1‑149 (MQ=255) g‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGgctg < 3:97731/142‑1 (MQ=255) g‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGgctg > 4:97731/1‑142 (MQ=255) gaagaaGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGcc > 2:33282/1‑147 (MQ=255) aagaagGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTgggg > 8:70481/1‑106 (MQ=255) aagaagGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTgggg < 7:70481/106‑1 (MQ=255) aagGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGc < 4:272392/149‑1 (MQ=255) aagGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGc < 4:377183/149‑1 (MQ=255) gCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATc < 2:239092/149‑1 (MQ=255) cGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCg < 3:359771/149‑1 (MQ=255) cGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCg < 2:265985/149‑1 (MQ=255) aTGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAc < 3:43444/149‑1 (MQ=255) cTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGcc < 3:115658/130‑1 (MQ=255) cTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGcc > 4:115658/1‑130 (MQ=255) cTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTc > 5:249396/1‑147 (MQ=255) gTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCgag < 1:351173/148‑1 (MQ=255) ttcttcGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGagaa < 3:232237/149‑1 (MQ=255) cGGCCTGTCCGGCACTGGCAAGACTACCGCTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAAc > 1:23580/1‑149 (MQ=255) ggCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGa < 3:209411/149‑1 (MQ=255) gCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAg < 2:265746/149‑1 (MQ=255) cTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAGc < 6:249396/148‑1 (MQ=255) gCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATc < 1:134026/149‑1 (MQ=255) cACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATCt < 2:390184/149‑1 (MQ=255) cACTGGCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCCAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATCt < 1:33282/149‑1 (MQ=255) gCAAGACTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATCTGGaaa < 1:346536/149‑1 (MQ=255) aCTACA‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGGTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCAt < 8:182800/149‑1 (MQ=255) cTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCAt < 6:249652/148‑1 (MQ=255) cTACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCAt < 2:193069/148‑1 (MQ=255) tACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATc < 6:259055/148‑1 (MQ=255) tACC‑CTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATc < 5:175123/148‑1 (MQ=255) c‑cTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCaa > 6:204858/1‑147 (MQ=255) cTTTCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGc > 6:194280/1‑148 (MQ=255) tttCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGACTGGAGTCCGAGAAGAACGAGCCGGTCATCTGTAAAGCAATAAAg > 1:133298/1‑148 (MQ=255) tttCGGCTGACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCAc > 1:242640/1‑149 (MQ=255) tGACGAAAG‑CCGTTCCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCACCGAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAg > 4:153318/1‑148 (MQ=255) gACGAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCTGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAg > 2:203568/1‑148 (MQ=255) gAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAGTAc < 5:353801/148‑1 (MQ=255) gAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAGTACt > 8:11173/1‑149 (MQ=255) gAAAGCCGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAGTACt < 7:11173/149‑1 (MQ=255) | CCATGTTCTCGGTGCAGAACTTCCTGCTGCCGGCTGCCGATGTACTGCCTATGCACTGCGCGGCCAACATCGG‑CGAAGAAGGCGATGTGACCTTGTTCTTCGGCCTGTCCGGCACTGGCAAGACTACC‑CTTTCGGCTGACGAAAG‑CGTTACCTGATCGGTGACGACGAGCACGGTTGGGGCGAAGGCGTTGTCTTCAACATGGAAGGCGGCTGCTACGCCAAGTGCATCGAC‑‑CTGTCCGAGAAGAACGAGCCGGTCATCTGGAAAGCCATCAAGCACGGCGCAGTACT > NC_002947/307721‑308008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |