New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2301454	0 (0.000)	60 (0.890)	50/282	0.5	100%	intergenic (‑98/‑233)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	5545321 =	NA (NA)					intergenic (‑461/+416)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB

GGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2301305‑2301454 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTCT  >  NC_002947/5545321‑5545467                                                                                                                                                                                                                                                                                                            GGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGC                                                                                                                                                       >  7:277928/1‑149    CGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGGCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTT                                                                                                                                                     <  5:280256/148‑1     GTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTC                                                                                                                                                    >  7:229162/1‑148         AGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA                                                                                                                                               <  3:93254/149‑1          GGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA                                                                                                                                               <  5:42629/148‑1          GGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATAGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA                                                                                                                                               >  1:74743/1‑148           GCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA                                                                                                                                               >  5:72221/1‑147           GCTTTGGCCCAGGTGCCAGTAGTATGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AA                                                                                                                                            <  7:329539/149‑1            CTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AAC                                                                                                                                           <  8:277928/149‑1             TTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AAC                                                                                                                                           >  7:334286/1‑148                GGCCCTGGTGCCAGTCGGTGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGTTAACCCAAGCGTGGGGCCCCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAA                                                                                                                                        <  1:74865/148‑1                GGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAA                                                                                                                                        <  7:72802/148‑1                 GCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAA                                                                                                                                        <  6:81899/147‑1                 GCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAA                                                                                                                                         >  4:123079/1‑146                 GCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAA                                                                                                                                         >  4:150532/1‑146                  CCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAA                                                                                                                                         >  4:298387/1‑145                       GTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACC                                                                                                                                <  4:120510/149‑1                          CCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCA                                                                                                                              <  3:123079/148‑1                            AGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTG                                                                                                                           >  2:78944/1‑149                                 GAGGTATGAAACAGACGCATGGATTACCTTTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTTTGGTAACGCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTT                                                                                                                      <  3:347272/149‑1                                     TATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTA                                                                                                                  <  4:52753/149‑1                                        GAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAG                                                                                                                 <  6:220780/147‑1                                         AAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTTGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCACAACAAAAGATAACCCACTGTTCTTTCTAGC                                                                                                                <  1:237756/148‑1                                               ACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAA                                                                                                        <  3:150532/149‑1                                                 GCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACA                                                                                                      <  2:10399/149‑1                                                  CATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCAAGCGAAAAAAACA                                                                                                      <  6:135036/148‑1                                                       ATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCG                                                                                                >  1:161130/1‑149                                                         GACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCG                                                                                              >  4:213218/1‑149                                                             TGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGT                                                                                          >  3:24875/1‑149                                                                TGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCAATCA‑AACAAAAGATAACCCACTGTTCTTTATAGCGAAAAAAAAAGGCGCGCGGGGTCAA                                                                                       >  7:267664/1‑149                                                                       GAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGC                                                                                <  8:229162/149‑1                                                                           CGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAA                                                                             <  6:52977/148‑1                                                                                AAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTT                                                                        <  6:72221/148‑1                                                                                 AGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCA                                                                      <  8:334286/149‑1                                                                                  gaGGGTAAAGGTCGGTATGGAAAACCAAGCGTGGGGACGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCA                                                                      <  6:320824/146‑1                                                                                  GCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGAGCGCGGGGTCAATGGCGGCGAAGTGTTCAC                                                                     >  7:77033/1‑149                                                                                   CGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATTACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACT                                                                    >  3:246371/1‑149                                                                                    GGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTC                                                                   >  7:200056/1‑149                                                                                          AGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTAT                                                             <  8:200056/149‑1                                                                                             GCGGTATTTTAACCGAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGATTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGTGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACG                                                          <  8:267664/149‑1                                                                                                 TATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGG                                                       >  5:180858/1‑148                                                                                                   TGGTAACCCAAGCGTTGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTATATCA‑AACAAAAGATAACCCACTTTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCA                                                    <  7:153673/149‑1                                                                                                        ACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGC                                                <  2:74743/148‑1                                                                                                          CCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAG                                             >  1:284920/1‑149                                                                                                          CCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAG                                             <  1:78944/149‑1                                                                                                            AAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCT                                           <  3:213218/149‑1                                                                                                              tCGTGTGTCCGCTGTGCGGCCCGATCGCGGGCAAGCCATCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGT                                         <  8:77033/148‑1                                                                                                                GTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGC                                       <  2:161130/149‑1                                                                                                                 TGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCC                                      <  3:298387/149‑1                                                                                                                     GCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACA                                  <  8:230583/149‑1                                                                                                                      CCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAG                                 <  4:24875/149‑1                                                                                                                                         CGGGCAAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCA               >  6:265915/1‑148                                                                                                                                              AAGCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGG          >  5:386404/1‑148                                                                                                                                              AAGCCAGCTTCTAACA‑AACAAAAGATAACACACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGCGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAACCTGTGCCTACAGGGATTAACGCCGATGCCATTTGa          >  4:247819/1‑147                                                                                                                                                GCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGC        >  3:134292/1‑148                                                                                                                                                GCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGG                                                                                 <  2:85012/75‑1                                                                                                                                                GCCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGG                                                                                 >  1:85012/1‑75                                                                                                                                                 CCAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGT                                                         >  8:271173/1‑98                                                                                                                                                  CAGCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCAC     >  1:6488/1‑149                                                                                                                                                    GCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTC   <  8:221508/149‑1                                                                                                                                                    GCTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTC   <  8:344363/149‑1                                                                                                                                                     CTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTCT  <  3:38299/149‑1                                                                                                                                                     CTTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTC   >  6:258359/1‑148                                                                                                                                                      TTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTCT  <  6:252314/148‑1                                                                                                                                                      TTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGT                                         >  3:7475/1‑109                                                                                                                                                      TTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGT                                         <  4:7475/109‑1                                                                                                                                                                                                                                                                                                            GGCCGTGCAGGCTTTGGCCCAGGTGCCAGTCGGAGGTATGAAACAGACGCATGGATGACCTGTTGGTGTCGAGTCGGGCAAGCGGGGAAAGGGCGGTATGGTAACCCAAGCGTGGGGCCGCTGTGCGGCCCGATCGCGGGCAAGCCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2301305‑2301454 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctTCTATCA‑AACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGGCCACTCT  >  NC_002947/5545321‑5545467

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.