New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 82128 =7 (0.100)78 (1.200) 61/272 0.1 92.1% intergenic (+105/+23) PP_0071/qor‑I hypothetical protein/quinone oxidoreductase
?NC_002947 = 3828304 NA (NA)intergenic (‑328/+31) PP_3381/PP_3382 transposase/gluconate 2‑dehydrogenase cytochrome c subunit

CCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCGGCAACCTCCTGGTCACTCAGGCGCCAGCCG  >  NC_002947/3828168‑3828446
                                                                                                                                        |                                                                                                                                              
cccTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTGCGGGc                                                                                                                                     >  1:83172/1‑148 (MQ=11)
 ccTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCg                                                                                                                                    <  6:355893/148‑1 (MQ=31)
   tAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAgg                                                                                                                                 >  1:52209/1‑149 (MQ=33)
         aGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCCTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCt                                                                                                                            >  1:38645/1‑148 (MQ=38)
          gCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTg                                                                                                                           <  5:165141/148‑1 (MQ=38)
           cAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGaa                                                                                                                         <  1:37173/149‑1 (MQ=40)
           cAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGa                                                                                                                          <  5:365480/148‑1 (MQ=39)
              aaGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGaaaa                                                                                                                       >  5:229191/1‑148 (MQ=255)
                    gcTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGt                                                                                                                 >  8:20828/1‑148 (MQ=255)
                        gCCCTACCGGTCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACTTCagc                                                                                                             <  2:82867/148‑1 (MQ=255)
                         cccTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCagc                                                                                                             >  6:195855/1‑147 (MQ=255)
                              ccGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCagcgaagcg                                                                                                       >  5:160137/1‑148 (MQ=255)
                                gggCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACt                                                                                                    <  4:139649/149‑1 (MQ=255)
                                  gCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACttt                                                                                                  <  2:52209/149‑1 (MQ=255)
                                  gCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACtt                                                                                                   >  2:17727/1‑148 (MQ=255)
                                    cAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTa                                                                                                 >  4:203187/1‑148 (MQ=255)
                                    cAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTa                                                                                                 >  2:82852/1‑148 (MQ=255)
                                    cAACCGCCTTTTCCTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTAc                                                                                                <  2:38645/149‑1 (MQ=255)
                                     aaCCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTAc                                                                                                <  6:160137/148‑1 (MQ=255)
                                         gCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTCGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCAc                                                                                           >  4:162043/1‑149 (MQ=255)
                                           cttttcttttTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACcg                                                                                         >  2:194571/1‑149 (MQ=255)
                                                cttttTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGt                                                                                    >  3:77757/1‑149 (MQ=255)
                                                   tttCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGt                                                                                    <  7:11500/146‑1 (MQ=255)
                                                   tttCAAAATGGCAGCGGCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGt                                                                                    <  3:268085/146‑1 (MQ=255)
                                                      cAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACgg                                                                               >  2:148634/1‑148 (MQ=255)
                                                       aaaaTGTCAGCGTCGCTGCGGACCTGACGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCTGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGCCGGTGatgta                                                                              <  4:62172/148‑5 (MQ=21)
                                                         aaTGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACCCGTCAGCGAAGCGACTTTACATCACCGCCGGTGatgtaaag                                                                           <  2:41755/149‑8 (MQ=255)
                                                         aaTGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACt                                                                           <  7:20828/149‑1 (MQ=255)
                                                           tGTCCGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGc                                                                         <  1:17727/149‑1 (MQ=255)
                                                           tGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTg                                                                          >  6:45259/1‑148 (MQ=255)
                                                               aGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTg                                                                     >  1:285218/1‑149 (MQ=255)
                                                                tcggcGCTGCGCAACTCCCCCCGAACACCTCATGTTTGCTGCGCCACACCGCACCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCATCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCtt                                                                      <  5:267694/143‑1 (MQ=25)
                                                                gCGTTGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGCGCTGGGTGAACTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGCAGCGACTTTACATCACCGGCGGTGACGGCACTCCCttcg                                                                    >  8:177379/1‑147 (MQ=25)
                                                                      cTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTAc                                                                <  6:229191/147‑1 (MQ=255)
                                                                         cGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCaa                                                           >  4:184423/1‑149 (MQ=255)
                                                                         cGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCa                                                            >  5:185626/1‑148 (MQ=255)
                                                                           gAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAAc                                                          <  5:195855/148‑1 (MQ=255)
                                                                           gAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCAGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAAGACGTCAGCGAAGCGCCTTTACAACAACGGCGGGGACGGCAATGACTTGGTTAcagcta                                                           >  4:268151/1‑142 (MQ=21)
                                                                              cTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAActgct                                                      <  7:46137/149‑1 (MQ=255)
                                                                               tGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCAACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAActgct                                                      >  5:186149/1‑148 (MQ=255)
                                                                                  aGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACtgctgc                                                    <  6:211016/147‑1 (MQ=255)
                                                                                   gCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTGCGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGaa                                                 <  2:83172/149‑1 (MQ=255)
                                                                                   gCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGaa                                                 <  1:82852/149‑1 (MQ=255)
                                                                                         cacCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGaaa                                            <  7:224060/148‑1 (MQ=255)
                                                                                         cacCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGaaa                                            <  1:194571/148‑1 (MQ=255)
                                                                                          cccTCATGTTTGCTGCGCGACAGCGCAGGCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTGAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAAtt                                          <  7:177379/148‑1 (MQ=255)
                                                                                           ccTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAAtt                                          >  3:69928/1‑148 (MQ=255)
                                                                                            cTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTca                                        >  7:71192/1‑149 (MQ=255)
                                                                                                tGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTcac                                       <  6:185626/146‑1 (MQ=255)
                                                                                                  tttGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCt                                  >  3:230248/1‑149 (MQ=255)
                                                                                                     gctgcGCGACAGCGCAGCCCGGAAGGGCAGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCgg                               >  1:227310/1‑149 (MQ=255)
                                                                                                      ctgcGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCgg                               >  3:304783/1‑148 (MQ=255)
                                                                                                       tgcGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTAGGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGCTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCGGc                              <  5:331370/148‑1 (MQ=255)
                                                                                                       tgcGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCGGc                              >  3:59348/1‑148 (MQ=255)
                                                                                                         cgcgACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCGGCaa                            <  8:71192/148‑1 (MQ=255)
                                                                                                         cgcgACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCGGCAAc                           <  3:162043/149‑1 (MQ=255)
                                                                                                          gcgACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCGGCAAc                           <  5:45259/148‑1 (MQ=255)
                                                                                                              cAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAActg                                                        <  1:378187/115‑1 (MQ=255)
                                                                                                              cAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAActg                                                        >  2:378187/1‑115 (MQ=255)
                                                                                                                gcgcAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCGGCAACCTCCTgg                    <  4:77757/149‑1 (MQ=255)
                                                                                                                 cgcAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCCACTGCTGCGAATGAAATTCACCACCTCGGCAACCTCCTGGt                   >  8:290335/1‑149 (MQ=255)
                                                                                                                 cgcAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCAAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCGGCAACCTCCTgg                    >  5:362526/1‑148 (MQ=255)
                                                                                                                   cAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCGGCAACCTCCTGGTCa                 >  3:24679/1‑149 (MQ=255)
                                                                                                                    aGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCGGCAACCTCCTGGTCAc                <  7:246152/149‑1 (MQ=255)
                                                                                                                      cccGGAAGGGCTGGGTGATCTCCAACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCGGCAACCTCCTGGTCACt               <  6:186149/148‑1 (MQ=255)
                                                                                                                          gAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCGGCAACCTCCTGGTCACTCAGgc          <  4:304783/149‑1 (MQ=255)
                                                                                                                            aGGGCTGGGTGATCTGCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGAGTTTACTTCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCGGCAACCTCCTGGTCACTCAGgcgc        <  3:15200/149‑1 (MQ=255)
                                                                                                                             gggCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCGGCAACCTCCTGGTCACTCAGgcg         >  5:139810/1‑147 (MQ=255)
                                                                                                                                cTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCGGCAACCTCCTGGTCACTCAGGCGCCAGc    <  3:351059/149‑1 (MQ=255)
                                                                                                                                   ggTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCGGCAACCTCCTGGTCACTCAGGCGCCAGCCg  >  1:218358/1‑148 (MQ=255)
                                                                                                                                        |                                                                                                                                              
CCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACGGGCGAGGGCGCTGAAAAACACGTCAGCGAAGCGACTTTACATCACCGGCGGTGACGGCACTGCCTTGGTTACCCCAACTGCTGCGAATGAAATTCACCACCTCGGCAACCTCCTGGTCACTCAGGCGCCAGCCG  >  NC_002947/3828168‑3828446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.