| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 353,067 | A→G | intergenic (+34/+84) | hisF → / ← cbcV | imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 353,067 | 0 | A | G | 100.0% | 85.0 / NA | 26 | intergenic (+34/+84) | hisF/cbcV | imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (12/14); total (12/14) | |||||||||||
TGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑AGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGT > NC_002947/352924‑353202 | tGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCAc > 8:292548/1‑149 (MQ=255) aGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAg < 1:353374/149‑1 (MQ=255) tGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAgagatct > 2:62593/1‑142 (MQ=255) cAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCATTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTTTGCTGAGATctct > 5:6744/1‑148 (MQ=255) gCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCATTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCtgt < 6:6744/148‑1 (MQ=255) ttCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGc > 7:79317/1‑149 (MQ=255) ccACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGa < 1:307660/146‑1 (MQ=255) aCTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGc < 8:18017/149‑1 (MQ=255) aCTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGc < 7:292548/149‑1 (MQ=255) cTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCg > 7:273966/1‑149 (MQ=255) cacaGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAgg > 1:35902/1‑149 (MQ=255) aGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCcac > 6:281698/1‑103 (MQ=255) gTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCcaca < 5:281698/103‑1 (MQ=255) gCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGc < 8:79317/149‑1 (MQ=255) cAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTGTGCTGAGATCTCtgtg > 5:395013/1‑112 (MQ=255) aaGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTgg < 6:395013/112‑1 (MQ=255) cTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCg > 5:144019/1‑104 (MQ=255) ttCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCgg < 6:144019/104‑1 (MQ=255) cgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTccc > 4:365872/1‑68 (MQ=255) cgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTccc < 3:365872/68‑1 (MQ=255) gtTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGCGGGGCACGCCCCCACCCACAGGTTTGATGAAATAAATGTGGGACCGGGCGTGCCCGCGAAGGCCCGCCAAGCGGCCCCAATTGATTCAACCGTGTTTATTGACGag > 2:285676/1‑148 (MQ=255) aTCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTg > 6:171868/1‑148 (MQ=255) ccGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg < 8:273966/149‑1 (MQ=255) cGGGGCTGC‑TTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg < 5:171868/148‑1 (MQ=255) c‑tTTGCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATcccc < 2:35902/148‑1 (MQ=255) gCAGCCCTTCGC‑GGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAATCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGt < 1:285676/148‑1 (MQ=255) | TGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGC‑TTTGCAGCCCTTCGC‑AGGCACGCCCGCTCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGT > NC_002947/352924‑353202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |