New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 378870291 (0.990)4 (0.040) 4/290 13.2 4.5% coding (602/960 nt) yibQ putative polysaccharide deacetylase
?NC_000913 = 3788713 82 (0.920)coding (613/960 nt) yibQ putative polysaccharide deacetylase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

CGACAGCGTAACCATCGGTAATACCCAGGCGATGCGCGCCGCGCAAGGCACTGGCGTGAAGGTGATCAAACGGAAGGTATTCCTCGACGATTCGCAAAATGAAGCGGACATCCGTGTGCAATTTAATCGCGCAATTGACCTGGCGCGTCGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3788550‑3788702
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaTGGTCGAACCGTTGCGACGCGCCAGGTCAATTGCGCGATTAAATTGCACACGGATGTCCGCTTCATTTTGCGAATCGTCGAGGAATACCTTCCGTTTGATCACCTTCACGCCAGTGCCTTGCGCGGCGCGCATCGCCTGGGTATTACCG  <  NC_000913/3788713‑3788565
                                                                                                                                                                                                                                                                                                              
CGACAGCGTAACCATCGGTAATACCCAGGCGATGCGCGCCGCGCAAGGCACTGGCGTGAAGGTGATCAAACGGAAGGTATTCCTCGACGATTCGCAAAATGAAGCGGACATCCGTGTGCAATTTAATCGCGCAATTGACCTGGCGCGTCG                                                                                                                                                          <  1:1323207/150‑1
 GACAGCGTAACCATCGGTAATACCCAGGCGATGCGCGCCGCGCAAGGCACTGGCGTGAAGGTGATCAAACGGAAGGTATTCCTCGACGATTCGCAAAATGAAGCGGACATCCGTGTGCAATTTAATCGCGCAATTGACCTGGCGCGTCGCA                                                                                                                                                        <  1:984793/151‑1
  ACAGCGTAACCATCGGTAATACCCAGGCGATGCGCGCCGCGCAAGGCACTGGCGTGAAGGTGATCAAACGGAAGGTATTCCTCGACGATTCGCAAAATGAAGCGGACATCCGTGTGCAATTTAATCGCGCAATTGACCTGGCGCGTCGCA                                                                                                                                                        >  2:267581/1‑150
                                                                                                                        ATTTAATCGCGCAATTGACCTGGCGCGTCGCAATGGTCGAACCGTTGCGACGCGCCAGGTCAATTGCGCGATTAAATTGCACACGGATGTCCGCTTCATTTTGCGAATCGTCGAGGAATACC                                                              >  1:932762/1‑122
                                                                                                                        ATTTAATCGCGCAATTGACCTGGCGCGTCGCAATGGTCGAACCGTTGCGACGCGCCAGGTCAATTGCGCGATTAAATTGCACACGGATGTCCGCTTCATTTTGCGAATCGTCGAGGAATACC                                                              <  2:932766/122‑1
                                                                                                                                       TGACCTGGCGCGTCGCAATGGTCGAACCGTTGCGACGCGCCAGGTCAATTGCGCGATTAAATTGCACACGGATGTCCGCTTCATTTTG                                                                                 >  1:880436/1‑88
                                                                                                                                       TGACCTGGCGCGTCGCAATGGTCGAACCGTTGCGACGCGCCAGGTCAATTGCGCGATTAAATTGCACACGGATGTCCGCTTCATTTTG                                                                                 <  2:880438/88‑1
                                                                                                                                                     GCAATGGTCGAACCGTTGCGACGCGCCAGGTCAATTGCGCGATTAAATTGCACACGGATGTCCGCTTCATTTTGCGAATCGTCGAGGAATACCTTCCTTTTGATCACCTTCACGCCAGTGCCTTGCGCGGCGCGCATCGCCTGGGTATTAC    <  1:1099503/151‑1
                                                                                                                                                       AATGGTCGAACCGTTGCGACGCGCCAGGTCAATTGCGCGATTAAATTGCACACGGATGTCCGCTTCATTTTGCGAATCGTCGAGGAATACCTTCCGTTTGATCACCTTCACGCCAGTGCCTTGCGCGGCGCGCATCGCCTGGGTATTACCG  <  2:759877/151‑1
                                                                                                                                                                                                                                                                                                              
CGACAGCGTAACCATCGGTAATACCCAGGCGATGCGCGCCGCGCAAGGCACTGGCGTGAAGGTGATCAAACGGAAGGTATTCCTCGACGATTCGCAAAATGAAGCGGACATCCGTGTGCAATTTAATCGCGCAATTGACCTGGCGCGTCGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3788550‑3788702
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaTGGTCGAACCGTTGCGACGCGCCAGGTCAATTGCGCGATTAAATTGCACACGGATGTCCGCTTCATTTTGCGAATCGTCGAGGAATACCTTCCGTTTGATCACCTTCACGCCAGTGCCTTGCGCGGCGCGCATCGCCTGGGTATTACCG  <  NC_000913/3788713‑3788565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.