New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 3788702 | 91 (0.990) | 4 (0.040) | 4/290 | 13.2 | 4.5% | coding (602/960 nt) | yibQ | putative polysaccharide deacetylase |
? | NC_000913 | = 3788713 | 82 (0.920) | coding (613/960 nt) | yibQ | putative polysaccharide deacetylase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below cutoff threshold. |
CGACAGCGTAACCATCGGTAATACCCAGGCGATGCGCGCCGCGCAAGGCACTGGCGTGAAGGTGATCAAACGGAAGGTATTCCTCGACGATTCGCAAAATGAAGCGGACATCCGTGTGCAATTTAATCGCGCAATTGACCTGGCGCGTCGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3788550‑3788702 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaTGGTCGAACCGTTGCGACGCGCCAGGTCAATTGCGCGATTAAATTGCACACGGATGTCCGCTTCATTTTGCGAATCGTCGAGGAATACCTTCCGTTTGATCACCTTCACGCCAGTGCCTTGCGCGGCGCGCATCGCCTGGGTATTACCG < NC_000913/3788713‑3788565 CGACAGCGTAACCATCGGTAATACCCAGGCGATGCGCGCCGCGCAAGGCACTGGCGTGAAGGTGATCAAACGGAAGGTATTCCTCGACGATTCGCAAAATGAAGCGGACATCCGTGTGCAATTTAATCGCGCAATTGACCTGGCGCGTCG < 1:1323207/150‑1 GACAGCGTAACCATCGGTAATACCCAGGCGATGCGCGCCGCGCAAGGCACTGGCGTGAAGGTGATCAAACGGAAGGTATTCCTCGACGATTCGCAAAATGAAGCGGACATCCGTGTGCAATTTAATCGCGCAATTGACCTGGCGCGTCGCA < 1:984793/151‑1 ACAGCGTAACCATCGGTAATACCCAGGCGATGCGCGCCGCGCAAGGCACTGGCGTGAAGGTGATCAAACGGAAGGTATTCCTCGACGATTCGCAAAATGAAGCGGACATCCGTGTGCAATTTAATCGCGCAATTGACCTGGCGCGTCGCA > 2:267581/1‑150 ATTTAATCGCGCAATTGACCTGGCGCGTCGCAATGGTCGAACCGTTGCGACGCGCCAGGTCAATTGCGCGATTAAATTGCACACGGATGTCCGCTTCATTTTGCGAATCGTCGAGGAATACC > 1:932762/1‑122 ATTTAATCGCGCAATTGACCTGGCGCGTCGCAATGGTCGAACCGTTGCGACGCGCCAGGTCAATTGCGCGATTAAATTGCACACGGATGTCCGCTTCATTTTGCGAATCGTCGAGGAATACC < 2:932766/122‑1 TGACCTGGCGCGTCGCAATGGTCGAACCGTTGCGACGCGCCAGGTCAATTGCGCGATTAAATTGCACACGGATGTCCGCTTCATTTTG > 1:880436/1‑88 TGACCTGGCGCGTCGCAATGGTCGAACCGTTGCGACGCGCCAGGTCAATTGCGCGATTAAATTGCACACGGATGTCCGCTTCATTTTG < 2:880438/88‑1 GCAATGGTCGAACCGTTGCGACGCGCCAGGTCAATTGCGCGATTAAATTGCACACGGATGTCCGCTTCATTTTGCGAATCGTCGAGGAATACCTTCCTTTTGATCACCTTCACGCCAGTGCCTTGCGCGGCGCGCATCGCCTGGGTATTAC < 1:1099503/151‑1 AATGGTCGAACCGTTGCGACGCGCCAGGTCAATTGCGCGATTAAATTGCACACGGATGTCCGCTTCATTTTGCGAATCGTCGAGGAATACCTTCCGTTTGATCACCTTCACGCCAGTGCCTTGCGCGGCGCGCATCGCCTGGGTATTACCG < 2:759877/151‑1 CGACAGCGTAACCATCGGTAATACCCAGGCGATGCGCGCCGCGCAAGGCACTGGCGTGAAGGTGATCAAACGGAAGGTATTCCTCGACGATTCGCAAAATGAAGCGGACATCCGTGTGCAATTTAATCGCGCAATTGACCTGGCGCGTCGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3788550‑3788702 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaTGGTCGAACCGTTGCGACGCGCCAGGTCAATTGCGCGATTAAATTGCACACGGATGTCCGCTTCATTTTGCGAATCGTCGAGGAATACCTTCCGTTTGATCACCTTCACGCCAGTGCCTTGCGCGGCGCGCATCGCCTGGGTATTACCG < NC_000913/3788713‑3788565 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |