New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4514684 | 97 (1.040) | 4 (0.040) | 4/296 | 15.4 | 4.1% | coding (1994/2325 nt) | fecA | TonB‑dependent outer membrane ferric citrate transporter and signal transducer; ferric citrate extracelluar receptor; FecR‑interacting protein |
? | NC_000913 | = 4514725 | 90 (0.970) | coding (1953/2325 nt) | fecA | TonB‑dependent outer membrane ferric citrate transporter and signal transducer; ferric citrate extracelluar receptor; FecR‑interacting protein | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below cutoff threshold. |
CATGAAGCCGGGAATGCGGCCGGTACTGCCGTCGGCGCTCTCTTTCACCGTATTGGCGTTATCCGCAAACTGGCTGGACTGGAAATCGCTGTTCAGATTGAACGTCCAGTTTCCTGGCTTGTAGTCCACGCCCAGCGTGCCTTTATGTTTC‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4514533‑4514684 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑c‑gCGAGAAAGGCGACACCTACGGCAATCTGGTACCATTCTCCCCGAAACATAAAGGCACGCTGGGCGTGGACTACAAGCCAGGAAACTGGACGTTCAATCTGAACAGCGATTTCCAGTCCAGCCAGTTTGCGGATAACGCCAATACGGTGAA < NC_000913/4514725‑4514576 CATGAAGCCGGGAATGCGGCCGGTACTGCCGTCGGCGCTCTCTTTCACCGTATTGGCGTTATCCGCAAACTGGCTGGACTGGAAATCGCTGTTCAGATTGAACGTCCAGTTTCCTGGCTTGTAGTCCACGCCCAGCGTGCCTTTATGTTTC < 1:1148236/151‑1 TTCAGATTGAACGTCCAGTTTCCTGGCTTGTAGTCCACGCCCAGCGTGCCTTTATGTTTCGGCGAGAAAGGCGACACCTACGGCAATCTGGGACCATTCTCCCCGAAACATAAAGGCACGCTGGGCGTGGACTACAAGCCAGGAAACTGG > 2:396953/1‑150 GTTTCCTGGCTTGTAGTCCACGCCCAGCGTGCCTTTATGTTTC‑GCGAGAAAGGCGACACCTACGGCAATCTGGTACCATTCTCCCCGAAACATAAAGGCACGCTGGGCGTGGACTACAAGCCAGGAAACTGGACGTTCAATCTGAACAGCG > 2:377809/1‑151 GCTTGTAGTCCACGCCCAGCGTGCCTTTATGTTTC‑GCGAGAAAGGCGACACCTACGGCAATCTGGTACCATTCTCCCCGAAACATAAAGGCACGCTGGGCGTGGACTACAAGCCAGGAAACTGGACGTTCAATCTGAACAGCGATTTCCAG < 1:377804/151‑1 CGTGCCTTTATGTTTCGGCGAGAAAGGCGACACCTACGGCAATCTGGTACCATTCTCCCCGAAACATAAAGGCACGCTGGGCGTGGACTACAAGCCAGGAAACTGGACGTTCAATCTGAACAGCGATTTCCAGTCCAGCCAGTTTGCGGAT < 1:396947/151‑1 C‑GCGAGAAAGGCGACACCTACGGCAATCTGGTACCATTCTCCCCGAAACATAAAGGCACGCTGGGCGTGGACTACAAGCCAGGAAACTGGACGTTCAATCTGAACAGCGATTTCCAGTCCAGCCAGTTTGCGGATAACGCCAATACGGTGA < 1:270159/151‑1 GCGAGAAAGGCGACACCTACGGCAATCTGGTACCATTCTCCCCGAAACATAAAGGCACGCTGGGCGTGGACTACAAGCCAGGAAACTGGACGTTCAATCTGAACAGCGATTTCCAGTCCAGCCAGTTTGCGGATAACGCCAATACGGTGAA < 1:1085986/151‑1 CATGAAGCCGGGAATGCGGCCGGTACTGCCGTCGGCGCTCTCTTTCACCGTATTGGCGTTATCCGCAAACTGGCTGGACTGGAAATCGCTGTTCAGATTGAACGTCCAGTTTCCTGGCTTGTAGTCCACGCCCAGCGTGCCTTTATGTTTC‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4514533‑4514684 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑c‑gCGAGAAAGGCGACACCTACGGCAATCTGGTACCATTCTCCCCGAAACATAAAGGCACGCTGGGCGTGGACTACAAGCCAGGAAACTGGACGTTCAATCTGAACAGCGATTTCCAGTCCAGCCAGTTTGCGGATAACGCCAATACGGTGAA < NC_000913/4514725‑4514576 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |