Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913925,9000AG41.8% 190.9 / 23.9 104noncoding (72/88 nt)serWtRNA‑Ser
Reads supporting (aligned to +/- strand):  ref base A (12/48);  new base G (43/0);  total (56/48)
Fisher's exact test for biased strand distribution p-value = 2.79e-18
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 105 total aligned reads displayed.

AGTTCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTCAAGAAGAAT  >  NC_000913/925752‑926050
                                                                                                                                                     |                                                                                                                                                        
aGTTCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGAtt                                                                                                                                                        <  2:873502/151‑1 (MQ=255)
 gTTCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTc                                                                                                                                                       <  1:383414/151‑1 (MQ=255)
   tCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTCg                                                                                                                                                      >  1:188337/1‑150 (MQ=255)
        gCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAAccc                                                                                                                                                 <  1:1153392/150‑1 (MQ=255)
          cGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCg                                                                                                                                              <  2:1127508/151‑1 (MQ=255)
           gTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGGGAGGGGGGGGGTTGAAacccccc                                                                                                                                             >  2:91891/1‑149 (MQ=38)
             aCAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGAt                                                                                                                                            <  1:506506/150‑1 (MQ=255)
             aCAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGAt                                                                                                                                            <  2:1267615/150‑1 (MQ=255)
              cAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTCGAAcccccccta                                                                                                                                           >  2:520811/1‑146 (MQ=255)
              cAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGGGAGGGGGGGGTTCGAAaccccccaac                                                                                                                                          >  1:185904/1‑146 (MQ=255)
                   aGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGc                                                                                                                                     <  1:1316665/151‑1 (MQ=255)
                     cTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGATCGAAACCCCGCTACGGTGCCg                                                                                                                                   >  2:56630/1‑151 (MQ=255)
                       tAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTTGAACCCCCCATACGTTGCCgg                                                                                                                                  >  1:1146622/1‑149 (MQ=255)
                       tAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCg                                                                                                                                   <  2:365770/149‑1 (MQ=255)
                       tAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCCATACGTTGCCGt                                                                                                                                  >  1:453254/1‑150 (MQ=255)
                        aGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTTGAACCCCCGATACGTTGCCGtat                                                                                                                                >  1:1187766/1‑151 (MQ=255)
                        aGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTCGAACCCCCCATACGTTGCCGtat                                                                                                                                >  2:172421/1‑151 (MQ=255)
                        aGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGGTTGGACCCCCCACACGTTGCCgggt                                                                                                                                >  2:1048366/1‑148 (MQ=37)
                          aaaTTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATac                                                                                                                              <  1:989275/151‑1 (MQ=255)
                            aTTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATacac                                                                                                                            <  1:1122390/151‑1 (MQ=255)
                            aTTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATacac                                                                                                                            <  1:72152/151‑1 (MQ=255)
                                acaGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGGTCTGACCCCCCAGACGTTGCCGTATacaca‑cgt                                                                                                                       >  1:936788/1‑149 (MQ=25)
                                   agTAACATAGGCCCCCCGCCCACCATGTTCTCTCGCGTACAGACAGATAAAAGGCCAAAAAAAAGCTCGCACTTTCGTACGAACTCTTCTCTAAATATGGC‑GGTGAGGGGACGATTCGAACCCGCGATACGTGGCCGTATACACG‑CTTTcc                                                                                                                    <  1:368740/150‑1 (MQ=255)
                                      aaCATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAgg                                                                                                                 <  2:1118003/151‑1 (MQ=255)
                                         aTACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGAGTTGAAACCCCCCAACGTTGCCGTATACACA‑CCTTCCCGGCgg                                                                                                              >  2:1014333/1‑150 (MQ=21)
                                           aCTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGGGGGGGGGGTTTGAACCCCCGATACGGTTCCGTATACACA‑CTTTctccgcgggc                                                                                                            >  1:1221955/1‑142 (MQ=21)
                                           aCTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTg                                                                                                             <  2:419733/150‑1 (MQ=255)
                                           aCTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGGGAGGGGGGGGGTTGAAACCCCCATACGTTGCCGTATAAACA‑CTTTCCAggggggc                                                                                                            >  1:826875/1‑146 (MQ=21)
                                              ccACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTTGAACCCCCGATACGGTTCCGTATAAACA‑CTTTTCCGGCGTGCTcc                                                                                                         >  2:1137106/1‑151 (MQ=21)
                                                 cccGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCCCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTc                                                                                                      <  2:948947/151‑1 (MQ=255)
                                                       caccaTGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGGGAGGGGGGGGTTTGAAACCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGGTCCTTCAGCCAc                                                                                                >  2:987447/1‑151 (MQ=255)
                                                         ccaTGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTc                                                                                              <  2:525616/151‑1 (MQ=255)
                                                           aTGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTTGAACCCCCGATACGTTTCCGTATACACA‑CTTTCCAGGCGGGCTCCCTCAGCCCCCCgg                                                                                            >  2:270797/1‑151 (MQ=18)
                                                                cACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGacac                                                                                        <  1:559793/150‑1 (MQ=255)
                                                                    gCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCCTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCa                                                                                    <  2:87895/150‑1 (MQ=255)
                                                                     ccGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGAGAGGGGGGGGGTTGAAACCCCCACAAGTTGGCGGATAAACA‑CTTTTCAGGGGGGGGCCTTTAGCCACTCGGGCACCCCA‑cc                                                                                 >  2:41497/1‑151 (MQ=17)
                                                                        tACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAAGGGGGGGGTCCGACCCCCGATACGTTGCCGTATACACA‑CCTTTCCGGCGGGGTCCTTCAGCCCCCCGGGCACCCCA‑CCaa                                                                               >  1:401870/1‑150 (MQ=17)
                                                                         acagacagATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTCGAACCCCCCCTACGTTGCCGTATACACA‑CTTTTCAGGCGTGCTCCTTCAGCCACCCGGACACCTCA‑CCcaa                                                                              >  1:764941/1‑150 (MQ=14)
                                                                          cagacagaTAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTCGAACCCCCCATACGTTGCCGGATACACA‑CTTTTCCGGCGGGCTCCCTCAGCCACTCGGGCACCTCA‑CCcaaat                                                                            >  1:1023582/1‑149 (MQ=14)
                                                                             acagaTAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTCGGAACCCCGATACGTTGCCGTATACACA‑CTTTCCAGGGGGGCTCCTTTAACCACTCGGACACCCCA‑CCCAATTGtt                                                                         >  1:431870/1‑151 (MQ=14)
                                                                             acagaTAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTCGAACCCCCGATACGTTGCCGTATACACC‑CTTTCCAGGCGGGCTCCTTCAGCCACTCCGACACCCCA‑CCAAATtttt                                                                         >  2:404741/1‑151 (MQ=14)
                                                                              cagaTAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGttt                                                                        <  2:1278084/151‑1 (MQ=255)
                                                                                gaTAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTg                                                                      <  2:403441/151‑1 (MQ=255)
                                                                                 aTAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGAGAGGGGGGGGTTCGAACCCCCGCTACGGTGCCCTATAAAAA‑CTTTCCAGGCGTGCTCCCTCAGCCACCCGGGCACCCCC‑CCAAATTGtttttt                                                                     >  2:217375/1‑149 (MQ=14)
                                                                                  tAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTTGAAACCCCGATACGTTGGCGGATACAAA‑CTTTTCAGGCGGGGTCCTTCGAGCACTCGGAAACCTCA‑CCAAAATGttttttt                                                                    >  1:715075/1‑148 (MQ=14)
                                                                                   aaaaTGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCt                                                                    <  2:1369081/150‑1 (MQ=255)
                                                                                   aaaaTGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTa                                                                   <  1:1247434/151‑1 (MQ=255)
                                                                                   aaaaTGCGAAAAAAAAGCTCGCACTCTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCt                                                                    <  1:552655/150‑1 (MQ=255)
                                                                                    aaaTGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTCGAACCCCCGATACGGTGCCGTATACACA‑CTTTCCACGCGTGCTCCTTCCGCCCCTCCGGCACCTCA‑CCCAATTGTTTTTCTAc                                                                  >  2:925880/1‑151 (MQ=14)
                                                                                    aaaTGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTAc                                                                  <  1:211661/151‑1 (MQ=255)
                                                                                       tGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGGGGGGGGGGTTTGGAACCCCCGAACGGTTGCCG‑ATAAACACCTTTCCAGGGGGGCCCCTCCACCCCCCCGGAAACCCCC‑CAAAATTTTTTTG‑TACCa                                                                >  1:990750/1‑150 (MQ=2)
                                                                                        gCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTCTAACCCCCGATACGTTGCCGGATACACA‑ATTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCCCA‑CCAAAATGTTTTGCTACCaa                                                               >  1:640437/1‑150 (MQ=14)
                                                                                        gCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTCGAAACCCCCCTACGTTGCCGTATAAACA‑CTTTCCCGGCGGGCTCCTTCAGCCACTCCGACACCCCA‑CCCAATTGTTTTGCTACCaa                                                               >  1:449914/1‑150 (MQ=14)
                                                                                           aaaaaaaaGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTTGAACCCCCGATACGTTGCCGTATAAACA‑CTTTCCAGGGGTGCTTCCTCAGCCACCCGGGCCCCCCACCCAAATttttttttacccaaacc                                                            >  2:1202238/1‑140 (MQ=11)
                                                                                            aaaaaaaGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCtn                                                          <  2:322941/151‑2 (MQ=255)
                                                                                               aaaaGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATg                                                       <  2:574131/151‑1 (MQ=255)
                                                                                                  aGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGGGGGGGGGGTTCGAACCCCCCATACGGTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCCGCCACCCGGGCACCTCC‑CCAAATTGTTTTTCTACCAAAACTCCTgggg                                                    >  1:1058224/1‑150 (MQ=14)
                                                                                                   gCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTTGAACCCCCCATACGTTTCCGGATACACA‑CTTTCCCGGCGGGCTCCTTCAGCCCCTCGGACACCCCA‑CCAAATTGTTTTTCTACCAAAACTCCTggggg                                                   >  1:754127/1‑149 (MQ=14)
                                                                                                    cTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTTGAACCCCCCAGACGTTTCCGTATACACA‑CTTTTCCGGCGGGCTCCCTCAGCCACCCGGACACCCCA‑CCCAAATTTTTTTCTTCCCAACCCCATgggggg                                                  >  2:773747/1‑151 (MQ=14)
                                                                                                      cGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCa                                                <  1:1218969/151‑1 (MQ=255)
                                                                                                      cGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAAGGGGGGGTTCCAAACCCCGCTAAGTTTGCGGATAAACA‑CCTTTCAGGCGCGCTCCTTCAGGCCCCCCGGCACCCCC‑CCCAAATGTTTTTTTACCCAAACACATggggggg                                                 >  1:969290/1‑149 (MQ=2)
                                                                                                       gCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCaa                                               <  1:232679/151‑1 (MQ=255)
                                                                                                        cACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAAc                                              <  1:91889/151‑1 (MQ=255)
                                                                                                        cACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAAc                                              <  1:825539/151‑1 (MQ=255)
                                                                                                            ttCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTCGAACCCCCGATACGTTGCCGTATACACC‑CTTTCCAGGCGGGCTCCCTCAGCCACCCGGACACCCCA‑CCAAAATTTTTTTCTACCAAACCTCCTGGGTGGCCACgggg                                          >  1:1362792/1‑151 (MQ=14)
                                                                                                            ttCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTCGAAACCCCCATACGTTGCCGTATAAACA‑CTTTTCAGGGGGGCTCCTTCAGCCACTCGGGCACCTCA‑CCAAAATGTTTTTCTTCCAAACCCCCTGGGTGGCAACgggg                                          >  1:1194647/1‑151 (MQ=14)
                                                                                                            ttCGTACGAGCTCTTCTTTAAATATGGC‑GGCGAGGGGGGGGATTGAACCCCCCACACGTTGCCGCATATACA‑CTTTTCCGGCGGGCGCCTTCCCCCACCCGGCCACCCCA‑CCCAAATGTTTTTCTTCCCAACCTCCTgggggggcaccggg                                          >  2:135538/1‑143 (MQ=2)
                                                                                                             tCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCCATACGGTGCCGTATAAACA‑CTTTCCAGGCGGGCCCCTTCAGCCACCCCGACACCTCA‑CCAAATTTTTTTGCTACCAAACCCCCTGGGGGGCAACggggg                                         >  1:1007857/1‑150 (MQ=14)
                                                                                                              cGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTCGAACCCCCGATACGTTGCCGGATACACA‑CTTTTCAGGCGTGCTCCTTCAGCCACTCGGACACCTCC‑CCCAATTGTTTTGCTACCAAACCTCATGGGGGGGAACgggggg                                        >  1:1193611/1‑149 (MQ=17)
                                                                                                              cGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGgc                                         <  2:128762/150‑1 (MQ=255)
                                                                                                                 aCGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGGTTTGAACCCCCCATACGTTTCCGTATAAACA‑CTTTTCAGGGGGGGTCCCTCCGCCCCTCCGGCACCCCC‑CCCAAATTTTTTTCTACCAAACCTCATGGGGGGCAAAGGGGCGct                                      >  2:1328877/1‑150 (MQ=12)
                                                                                                                 aCGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGct                                      <  1:754465/150‑1 (MQ=255)
                                                                                                                      ctctTCTTTAAATATGGC‑GGTGAGGGGGGGGGTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGGGGCAACGGGGCGCTACtat                                 >  1:686516/1‑150 (MQ=255)
                                                                                                                        cttcttTAAATATGGC‑GGTGAGGGGGGGGTTCGAACCCCCGATACGTTTCCGTATACACA‑CCTTCCCGGCGGGCTCCTTCAGCCACCCGGGCACCCCA‑CCAAATTGTTTTTCTTCCCAACCTCCTGGGGGGCAACCGGGCGCTACTATAgg                              >  1:261302/1‑151 (MQ=17)
                                                                                                                          tcttTAAATATGGC‑GGTGAGGGGGGGGTTTTGACCCCCGCTAAGATGCCTTATACACA‑CTTTTCAGGCGTGCCCCCTCAGCGACGCGGAGAACTCC‑CCCAATTTTTTTTCCACCAAACCTCATCGGGGGGAACGGGGCGCCTCTATAaggg                            >  1:791337/1‑150 (MQ=9)
                                                                                                                          tcttTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAggg                             <  1:711503/150‑1 (MQ=255)
                                                                                                                             ttAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGa                            <  2:185907/148‑1 (MQ=255)
                                                                                                                             ttAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGa                            <  1:1400797/148‑1 (MQ=255)
                                                                                                                               aaaTATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTgg                       <  1:1322656/151‑1 (MQ=255)
                                                                                                                               aaaTATGGC‑GGGGAGGGGGGGGGTCGAACCCCCGCTAAGTTTCCGGATACACA‑CTTTTCAGGGGGGGTCCTTCAGCCACCCGGGCACCCCA‑CCAAAATGTTTTGCTACCAAACCTCATGGGGGGGAAAGGGGGGGTACCATAGGGGGGTgg                       >  2:816912/1‑151 (MQ=255)
                                                                                                                                aaTATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGa                      <  2:169846/151‑1 (MQ=255)
                                                                                                                                 atatGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTgg                       >  2:1462366/1‑149 (MQ=255)
                                                                                                                                 atatGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAg                     <  2:698761/151‑1 (MQ=255)
                                                                                                                                   atGGC‑GGTGAGGGGGGGATTCGAGCCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACTCCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTa                   <  1:650024/151‑1 (MQ=255)
                                                                                                                                   atGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGt                    <  2:602001/150‑1 (MQ=255)
                                                                                                                                   atGGC‑GGTGAGGGGGGGATTCGAAACCCCGATACGGTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAAATGTTTTGCTACCAAACCTCCTGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAgg                    >  1:1192759/1‑149 (MQ=255)
                                                                                                                                     ggC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTaa                  >  1:1018618/1‑150 (MQ=255)
                                                                                                                                     ggC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTaa                  >  1:595332/1‑150 (MQ=255)
                                                                                                                                       c‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAAc               <  1:1093997/151‑1 (MQ=255)
                                                                                                                                       c‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAAc               <  2:1269761/151‑1 (MQ=255)
                                                                                                                                         ggTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACg              >  1:476686/1‑151 (MQ=255)
                                                                                                                                         ggTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACg              <  1:902358/151‑1 (MQ=255)
                                                                                                                                          gTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACgg             >  2:685527/1‑151 (MQ=255)
                                                                                                                                          gTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACgg             >  2:696273/1‑151 (MQ=255)
                                                                                                                                            gAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACC‑CTTTCCAGGCGTGCGCCTTCAGCCACTCGGACGCCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTc           <  1:1465003/151‑1 (MQ=255)
                                                                                                                                            gAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTc           >  1:1360273/1‑151 (MQ=255)
                                                                                                                                             aGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTc           >  1:219941/1‑150 (MQ=255)
                                                                                                                                               ggggggATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTCaag        <  1:1014338/151‑1 (MQ=255)
                                                                                                                                                gggggATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTCaaga       <  1:172419/151‑1 (MQ=255)
                                                                                                                                                   ggATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTCAagaaga    <  1:923468/151‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                        
AGTTCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGC‑GGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACA‑CTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCA‑CCAAATTGTTTTGCTACCAAACCTCATGGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTAAAACGGTCAAGAAGAAT  >  NC_000913/925752‑926050

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑