Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,842,914 | 0 | A | G | 42.7% | 102.1 / 30.7 | 77 | M182V (ATG→GTG) | gdhA | glutamate dehydrogenase, NADP‑specific |
Reads supporting (aligned to +/- strand): ref base A (4/39); new base G (31/1); total (36/41) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.35e-15 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTT > NC_000913/1842765‑1843060 | aTTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGgat < 2:920498/151‑1 (MQ=255) aTTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGgat < 2:915467/151‑1 (MQ=255) aTTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGgat < 2:420296/151‑1 (MQ=255) aTTTCGATCCGAAAGAAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCCCCTGGGCGGGGATACCGACGTCCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTAGGGCGGGgat < 2:559931/151‑1 (MQ=255) tCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGgatga < 2:1173288/150‑1 (MQ=255) gATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGgggatgg > 2:256009/1‑150 (MQ=255) gATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGAtgatga < 2:262490/151‑1 (MQ=255) ncGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGNCGNNCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGGGATGgaa > 2:110765/2‑150 (MQ=255) aaaGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTGATGaaaaaa > 1:868788/1‑149 (MQ=255) aGGAAAAAGCGAAGGTGAAGTGATGCG‑TTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTGATGgaaaaaatct > 2:1159158/1‑146 (MQ=255) gAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGAAGACAAACCcctc > 1:915562/1‑151 (MQ=255) aaaaaGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTcc < 1:289389/151‑1 (MQ=255) aaaaGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCca < 1:762654/151‑1 (MQ=255) aaaaGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCca < 1:135576/151‑1 (MQ=255) aaGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGGACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATACCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCcaac < 2:385595/151‑1 (MQ=255) aaGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCcaac < 2:264130/151‑1 (MQ=255) aGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCcaaca < 1:749406/151‑1 (MQ=255) aGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑Acc < 2:1451456/151‑1 (MQ=255) gAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGTGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGGGGGAAAAAATCTTCAACAAT‑aaccccc > 1:1344869/1‑145 (MQ=255) gAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGGGGTGAAAAAAAGCTCCCACAAA‑ACccccc > 2:770465/1‑150 (MQ=255) aaGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTGGAGGAAAAGATATCCAAAAAA‑AACGcccg > 1:1435507/1‑149 (MQ=255) aaGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTGAGGAAAAAAATCTCCCACAAA‑ACCGcccg > 1:1342075/1‑149 (MQ=255) aTGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGGGGGGAAAAAAATCTCCCACAAA‑ACCGCCCGCGTC‑t > 2:320528/1‑151 (MQ=255) cGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGGGATGAAAAAACCCTCCCACCCA‑AACGCCTGCGTC‑ttt > 1:482281/1‑149 (MQ=255) cGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑Ca < 1:823173/151‑1 (MQ=255) cGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGGCGTGAAGTCGGCTTTATGGCGGGGCGGTAGAAAAAGTTGCCCCAAAAT‑ACCggcgccaccttat > 1:409654/1‑139 (MQ=255) ttttGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTTTTGAAAAAACTCTCCCACAAT‑ACCCCCCCCGTT‑TT‑ccccc > 1:971467/1‑150 (MQ=255) ttttGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CAcc < 1:808542/150‑1 (MQ=255) aGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCAGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAggg < 2:1291618/151‑1 (MQ=255) gcTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCtt < 1:368398/151‑1 (MQ=255) gatgaCTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTc < 1:1047482/150‑1 (MQ=255) gatgaCTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCa < 1:573577/151‑1 (MQ=255) tgaCTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGGGGTGAAAAAACTCTCCCACAAA‑AACCCCCGCGGC‑TT‑TACC‑CGGAAGGGGCTTTTAtt > 1:4809/1‑151 (MQ=255) gaCTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTGGGGTAAAAACTCTCCCACAAA‑ACCGCCCGCGTC‑TT‑CCCC‑GGGAAGGGGCTTTCCttt > 1:546280/1‑151 (MQ=255) gaCTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGGGGTGAAAAAACTCTCCCACAAA‑AACCCCTGCGTC‑TT‑CCCC‑CGTAAGGGGCCTTCtttt > 2:1020684/1‑151 (MQ=255) gaCTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCAttt < 1:1455927/151‑1 (MQ=255) gAACTGTATCGCCACCTGGGCGCGGATCCCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTggc < 1:290535/150‑1 (MQ=255) aTCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGGGAGGAAAAAAATCTCCAACAAT‑ACCGCCCCCGGCTTT‑TCCC‑GGAAAGGGCCTTTTTTTTGG‑GGGAGTCt > 1:170839/1‑151 (MQ=255) cGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTGGTGAAAAAAATCTCCCACAAA‑AACGCCCGCGTC‑TTCCCCC‑GGGAGGGCCCTTTCtttttgggggggctt > 2:806681/1‑139 (MQ=255) cGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCtt < 1:225333/150‑1 (MQ=255) gCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTGGTGAAAAAAGTCCCCCACAAA‑ACCCCCCCCGGC‑TT‑TACC‑CGGAAGGGGCCTTTATTTTGCGGCAGTCCTAt > 1:859556/1‑151 (MQ=255) aCCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTGGTGGAAAAACTCTCCCACAAA‑AACCCCCGCGTC‑TT‑CACC‑CGTAAGGGGCTTTCTTTTTGCGGCAGGCTtttttt > 2:402838/1‑149 (MQ=255) aCCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTGGTGGAAAAAAACTCCCACAAA‑AACGCCCCCGGC‑TT‑CACC‑CGGGAGGGCCCTTTATTTTGCGGCAGGCTtttttc > 2:61067/1‑149 (MQ=255) ccTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTGGTGAAAAAAATCTCCAACAAA‑AACCCCCCCGTC‑TT‑CCCC‑CGGAAAGGGCTTTCTTTTTGCGGCCGGCTttttttc > 2:1021075/1‑148 (MQ=255) gggCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCg < 1:1076331/151‑1 (MQ=255) gcgcGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGa < 2:240480/151‑1 (MQ=255) cgcgGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGaa < 2:279322/151‑1 (MQ=255) gcgGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGGGGTGAAAAAAATCTCCCACAAA‑AACCCCCGCGTC‑TT‑CACC‑CGGAAGGGGCTTTTATTTTGCGGCCGGCTTTTTTGccccgg > 2:198217/1‑146 (MQ=255) gcgGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGCGGGGATGAGAAAAACCTTCAACAATAACCGCCCGGGCT‑TC‑CACC‑GTGAGGGGCCCTCCTTTTGGGGGC‑GACTTAtttgtcccgg > 2:199867/1‑141 (MQ=255) ggATACCGACGTTCCGGCAGGTGATGTCGGGGTTGGTGGTCGTGAAGTCGGCTTTAGGGCGGGGGTGATGAAAAGGCTCTCCAACAAT‑GCCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCt < 1:1454794/151‑1 (MQ=255) gATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTa < 1:709409/151‑1 (MQ=255) ccGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTGGTGAAAAAACTCTCCCACAAT‑AACGCCCGCGTC‑TT‑TCCC‑CGGAAGGGGCTTTCATTTTGGGGGAGGCTTTTTTGCCCCGGAGGTACCgg > 1:38270/1‑151 (MQ=255) ccGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGGGGTGAAAAAGCGCTCCCCCAAA‑ACCGCCCGCGCC‑TT‑CACC‑CGGAAAGGGCTTTTATTTTGGGGGAGGCTTATTTGCCCCGGAGccaaccg > 2:285468/1‑145 (MQ=255) gACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCt < 1:1112648/151‑1 (MQ=255) cGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTGGAGAAAAAGAACTTCCACAAA‑AAAGCCCGCGGC‑TT‑TTCC‑GGGAAGGGGCTTTTATTTTGGGGGGGGCTTTTTTTCCCCGAAGCAAACGGCCAc > 2:1256902/1‑151 (MQ=255) cGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGCGTTGGAAAAACCCCCCAACAAA‑ACCGCCACCCCC‑GT‑CCCC‑CCTGAAAGCCTTTGCTTTTGCGGCTGAGTTATTCTCCCCGAAGCTCCCgggtgc > 1:525013/1‑147 (MQ=255) cGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTAc < 1:1140523/151‑1 (MQ=255) cGGCAGTTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCt < 2:1220082/151‑1 (MQ=255) ggCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTg < 2:1016023/151‑1 (MQ=255) gCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTgg < 2:563358/151‑1 (MQ=255) ggTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGGGATGAAAAAAATCTCCAACAAA‑AACCCCCGCGTC‑TT‑CACC‑CGGAAGGGGCCTTCTTTTTGGGGCAGGCTTTTTTTCCCCGAAGATACCCGCCACGGGCTGGgtt > 2:1184019/1‑151 (MQ=255) ggTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGttt < 1:494883/151‑1 (MQ=255) gTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTa < 1:69293/151‑1 (MQ=255) tGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTGGTGAAAAAACTCTCCCACAAA‑AACGCCTGCGTC‑TT‑CACC‑CGTAAGGGCCCTTTATTTTGCGGCAGGCTTTTTTTCCCGGGAGCTACCGGCTACGGGCTGGgtttt > 1:499447/1‑149 (MQ=255) atCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTca < 2:604897/151‑1 (MQ=255) cGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTcaca < 2:682009/151‑1 (MQ=255) ggggTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTGATGAAAAAAATCTCCCACAAT‑AACGCCCGCGTC‑TT‑TACC‑GGTAAAGGGCTTTTTTTTTGCGGCCGGCTTTTTTTCCCCGGAGCTACCGGCGACGGGCTGGGttttttttc > 1:646767/1‑146 (MQ=255) tggtggTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGc < 1:290757/150‑1 (MQ=255) gtggtCGTGAAGTCGGCTTTATGGCGGGGGTGATGAAAAAACTCTCCCACAAA‑ACCCCCCGCGGC‑TT‑CACCGGGAAAGGGCCTTTATTTTGGGGGC‑GGCTTTTTTGCCCGGGAGCTACCCGCTACGGGCTGGGTTTTTTTTCAGAAGCaa > 1:985023/1‑150 (MQ=255) cGTGAAGTCGGCTTTATGGCGGGGGTGATGAAAAAAATCTCCCACAAA‑AACGCCCGCGGC‑TT‑TCCC‑CGGAAGGGCCTTTTATTTGGCGGGGGTCTTTTTTTCCCGGGAGCTACCGGCTCCCGGCTGGGTTTTTTTCCCGAAGCAAAGCTa > 1:1237615/1‑150 (MQ=255) cGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTa < 2:219504/150‑1 (MQ=255) cGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACAGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTaa < 1:256005/151‑1 (MQ=255) gTGAAGTCGGCTTTATGGCGGGGGGGGTGAAAAAACTCTCCAACAAA‑AACGCCCGCGTC‑TT‑CTCC‑CGGAAGGGCCTTTTATTTTGGGGCAGTCTTATTTTCCCGGGAGCTAACCGCCACGGGCTGGGTTTTTTTTCAGAAACAAAGGTaa > 2:878775/1‑150 (MQ=255) gAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAAc < 1:806684/151‑1 (MQ=255) aaGTCGGCTTTATGGCGGGGGGGATGAAAAAACTCTCCAACAAA‑AACGCCCGCGTC‑TT‑CACC‑CGGGAGGGGCCTTCATTTTGCGGCGGTCTTATTTTCCCGGAAGCTAACGGCGACGGTCTGGGTTTTTTTACAGAAGCAATGCTaaaa > 2:693117/1‑149 (MQ=255) gTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGcc < 1:1159151/151‑1 (MQ=255) cGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCACCAAT‑GCCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCa < 2:1152375/150‑1 (MQ=255) cGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCa < 1:320524/150‑1 (MQ=255) tGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATggg > 1:680916/1‑151 (MQ=255) ggCGGGGTTGATGAAAAAGCTCTCCAACAAT‑CCCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGt < 1:169767/151‑1 (MQ=255) ggCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGNNGNNNTATTCGCCCGGAAGNNNNNNNCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATggg < 1:110764/150‑1 (MQ=255) cGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGttt < 1:923848/151‑1 (MQ=255) ggggATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGtttt > 1:337241/1‑151 (MQ=255) | ATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAAT‑ACCGCCTGCGTC‑TT‑CACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTT > NC_000913/1842765‑1843060 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |