| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 925901 = | 129 (0.990) | 21 (0.160) +C |
8/296 | 15.2 | 19.3% | noncoding (71/88 nt) | serW | tRNA‑Ser |
| ? | NC_000913 | = 1097218 | 48 (0.370) | intergenic (+389/+347) | ycdU/serX | putative inner membrane protein/tRNA‑Ser | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
TCCCTATAGTAGCGCCCCGTTGCCACCCATGAGGTTTGGTAGCAAAACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/926024‑925901‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTGTATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGGTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGC < NC_000913/1097218‑1097071 | cCCCTATAGTGGCCCCCCGTTGCCACCCATGGGGTTTGGTAGAAAAAAAATTGGGTGGGGTGTCCGGGTGGCGGAAGGAGCACGCCTGGAAAGTGTTTATACGGAAACGTATCGGGGGTGCGAACCCCCCCCTCACCGCCATATTTAAAGA < 3:86431/150‑1 CCTATAGTAGCGCCCGGTTGCCCCCCAGGAGGTTGGGAAGAAAAACAATTTGGTGGGGTGCCCGGGTGGCTGAAGGAGCCCGCCGGGAAGGTGTGTATACGGAAACGTATCGGGGGTTCGAACCCCCCCCTCACCGCCATATTTAAAGAAG < 2:261302/151‑1 ATAGTAGCGCCCCGTTGCCCCCCATGAGGTTTGGTAGCAAAACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGACCCCCCCCCTCACCGCCATATTTAAAGAAGAG < 2:686516/150‑1 ccCCCCGTTCCCCCCCATGAGGTTTGGTAGCAAAACAATTGGGGGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGAAAAGTGTGTATCCGGCAACGTATCGGGGGTTCGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACG < 2:1193611/149‑1 CGCCCCGTTGCCACCCATGAGGTTTGGTAGAAAAACAATTTGGTGAGGTGTCCGGGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACG < 1:204446/151‑1 CCCCGTTGCCACCCAGGGGGTTTGGAAGAAAAACATTTTGGTGAGGTGCCCGAGTGGCTGAAGGAGCCCCCCTGAAAAGTGTTTATACGGCAACGTATGGGGGTTTCGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAA < 2:1194647/151‑1 CCCCGTGGCCACCCAGGAGGTTTGGTAGAAAAAAATTTTGGTGGGGTGTCCGGGTGGCTGAGGGAGCCCGCCTGGAAAGGGTGTATACGGCAACGTATCGGGGGTTCGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAA < 2:1362792/151‑1 CCGTTGCCCCCAATGGGGTTTGGTAGAAAAAAATTTTGGTGGGGTGCCGGAGTGGCTGAAGGAGCACGCCGGAAAAGTGTGTATACGGCAACGTATCGGGGGTTCAAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAG < 1:380752/151‑1 aaaAATTGGGGGGGGTGCCCGGGGGGCTGAAGGAGCACCCCTGGAAAGTGTGTATACGGAAACGTAGGGGGGGTGCAAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACAC < 3:231324/148‑1 AACAATTGGGTGGGGTGCCGGGGTGGCTGAAGGAGCCCCCGTGAAAAGTGTATATGCGGCAACGTATGGGGGTTTCGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACAC < 3:133827/151‑1 aaAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCGGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCAAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACAC < 1:329315/148‑1 tgggggGGTGTCCGGGGGGCTGAAGGAGCCCGCCGGGAAATTGTGTATACGGCAACTTAGGGGGGGTTCAAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGG < 1:538589/145‑1 gggGTCCGAGGGGCTGAGGGAGCCCGCCTGGAAAGTGTGTATACGGAAAGGTATGGGGGGTTCGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATG < 3:195344/147‑1 GTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAATCCCCCCCTCACCGCCATATTTAACGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTGTATTGCACACACCGGGGGGATGAG > 1:327382/1‑151 GTGCCCGAGGGGCTGAAGGAGCACGCAGGGAAAGTGTGTTTACGCCAACGTTTGGGGGGTTGGACCCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAG < 2:1400651/151‑1 gccgggGTGGCGGAAGGAGCCCGCCTGGAAGGTGTGAATACGGAAACGTATCGGGGGTTCGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAA < 4:73393/145‑1 GTCGGAGTGGCTGAAGGAGCCCGCCGGGAAAGTGTGTATACGGCAACGTATGGGGGGTTCGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGA < 4:289507/150‑1 cccggggGGCGGAAGGAGCCCGCCGGGAAAGTGTGTATACGGCAACGTATCGGGGGTCCGAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAG < 2:1027461/144‑1 cgGAAGGAGCACGCCGGAAAGGTTGGTATGCGACAAGGTAGGGGGGGTTCCACCCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGAta < 3:289427/148‑3 cAACCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTGTATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGGTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAG < 2:768864/150‑1 AACCCCCCCCTATCCGCCATATTTAAACAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTGTATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGGTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGC < 4:654216/151‑1 | TCCCTATAGTAGCGCCCCGTTGCCACCCATGAGGTTTGGTAGCAAAACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/926024‑925901‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCGTGTATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGGTCGACAACTGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGC < NC_000913/1097218‑1097071 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |