Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 298,960 | 0 | A | C | 43.9% | 192.1 / 47.4 | 131 | Y659D (TAT→GAT) | paoC | PaoABC aldehyde oxidoreductase, Moco‑containing subunit |
Reads supporting (aligned to +/- strand): ref base A (52/21); new base C (0/57); total (52/79) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.46e-19 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 134 total aligned reads displayed.
GTTATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTGCAGCACACAC > NC_000913/298811‑299107 | gTTATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑a > 1:169649/1‑150 (MQ=255) gTTATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑a > 1:435858/1‑150 (MQ=255) gTTATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑a > 3:405096/1‑150 (MQ=255) gTTATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑Ac > 2:65349/1‑151 (MQ=255) ttATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑Acc < 3:156106/151‑1 (MQ=255) ttATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑Acc < 3:260627/151‑1 (MQ=255) ataCACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑Acccc < 4:168654/151‑1 (MQ=255) gcgTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCatat < 2:1033843/151‑1 (MQ=255) cgTTGGCGATAGCCGCGCTCCCGCCGCACAGGCCCAGCCCACCGACCCCTTTGGCCTTCAGCGGGGAGGATAGGGGGTCGGTATCACCCAGAAAAACCCCCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCCCCTCAT‑ACCCCGCCatat < 3:183564/150‑1 (MQ=255) ttggccGATGGCCGCGCTCACGCCGCCCAGGCCCAGCTCCCCGCCCCCTTTGGCCTTCATCGGGGAGGATAGGGGGTCGGTATCATCCAGGAAAATCCCCCCCTTTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑CCCCCGCCATATCg < 3:448581/146‑1 (MQ=255) ttGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCCCCGACCCCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCACCCAGAAAAATCCCCTCCTTTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCg < 3:87912/150‑1 (MQ=255) ttGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATAGGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGAATGAACCGGCACCTCAT‑ACCCCGCCATATCg < 1:176924/150‑1 (MQ=255) ggCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTg > 4:264812/1‑150 (MQ=255) ggCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGa > 1:3139/1‑151 (MQ=255) cGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGAtt > 4:530934/1‑151 (MQ=255) cGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGAAAAATCCCCTCCTGTTTTGGGATA‑CCCGCATGAACCGGCCCCTCAT‑CCCCCGCCATATCGTGAtt < 1:325937/151‑1 (MQ=255) gATGGCCGCGCTCACGCCGCACAGGCCCAGCTCCCCGACCCCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCACCCAGAAAAATCCCCTCCTTTTTGGGGATA‑TCCGCATGAACCGGCACCTCAT‑CCCCCGCCATATCGTGATTa < 4:1296400/151‑1 (MQ=255) ccGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGa > 4:1406177/1‑150 (MQ=255) gcgcTCGCGCCGCACGGGCCCACCTCACCGCCCCCTTTGCCCTTCATCGGGGAGGATAGGGGGTCGGTATCACCCAGAAAAACCCCCCCCTGTTTGGGAATA‑CCCGCATAAACCGCCACCTCAT‑CCCCCGCCATATCGTGATTAACGAAGt < 4:995188/151‑1 (MQ=255) gcgcTCACGCCGCACAGGCCCAGCTCACCGCCCCCTTTGGCTTTCATGGGGGAGGATATGGGGTCGGTATCATCCAGAAAAATCCCCTCCTGTTTTGGGATA‑TCCGCATGACCCGGCACCTCAT‑CCCCCGCCATATCGTGATTAACGAAGt < 2:1195051/151‑1 (MQ=255) cgcTCACGCCGCACAGGCCCAGCCCCCCGACCCTTTTGGCCTTCATCGGGGAGGATAGGGGGTGGGTATCACCCAGAAAAACCCCCCCCTTTTTTGGGATA‑CCCGCATGAACCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGt < 3:279661/150‑1 (MQ=255) tCACGCCGCACAGGCCCAGCTCCCCGCCCCCTTGGGCCTTCATGGGGGAGGATAGGGGGTCGTTATCACCCAGAAAAATCCCCTCCTGTTTTGGAATA‑CCCGCATGAACCGGCACCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGcc < 3:550915/151‑1 (MQ=255) ccgccgcACAGGCCCAGCTCACCGACCCCTTTGGCCTTCATGGGGGAGGATATGGGGTCGGTATCACCCAGGAAAATCCCCTCCTTTTTGGGGATA‑TCCGCATGAACCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCa < 2:1227648/150‑1 (MQ=255) ccgaACAGGCCCAGCCCACCGACCCTTTTGGCCTTCTTCGGGAAGAATAGGGGGTCGATATCATCCAGGAAAATCCCCTCCTTTTTTGGAATC‑TCCGAAAGAACCGGCCCCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAAc < 4:1164510/151‑1 (MQ=255) ggCCCAGCTCACCGACACCTTTCGCCTTCATCGGGTAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCTCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATc > 4:586779/1‑151 (MQ=255) gCCCAGCTCACCGACCCCTTTGGCCTTCATGGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCCCCTGTTTGGGGATA‑TCCGCATGACCCGGCCCCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATcc < 2:1088370/151‑1 (MQ=255) gCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATc > 3:341877/1‑150 (MQ=255) cccAGCTCACCGACCCTTTTGCCCTTCAGCGGGGAGGATATGGGGTCGGTATCACCCAGAAAAACCCCCTCCTTTTTGGGGATA‑CCCGCATGACCCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCa < 4:1120656/151‑1 (MQ=255) ccAGCTCACCGACCCCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCACCCAGAAAAACCCCCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCAc < 2:1039440/151‑1 (MQ=255) aGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCg > 4:1172748/1‑151 (MQ=255) gCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCg > 3:358072/1‑150 (MQ=255) cTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGc > 3:290859/1‑150 (MQ=255) cccccaacccttttGCCCTTCAGGGGGGAGAATATGGGTTCTATATCACCCAGAAAATTCCCCCCCTTTTTTGGAATA‑CCCGCATGACCCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCa < 4:1050668/140‑1 (MQ=255) cACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAg > 1:22973/1‑151 (MQ=255) cACCGACACCTTGGGCCTTCAGGGGGGAGGATAGGGGGGCGGTACCACCCAGAAAAATCCCCTCCGTTTTGGGGATA‑CCCGCATGACCCGCCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAg < 4:237593/151‑1 (MQ=255) ccGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGct > 4:1133087/1‑151 (MQ=255) gACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGctcc > 4:1434267/1‑151 (MQ=255) cccTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGAAAAATCCCCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCtcctcc < 2:150610/150‑1 (MQ=255) ccTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCtcctcc > 4:454117/1‑150 (MQ=255) ccTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGCCACATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCtcctcc > 2:269839/1‑150 (MQ=255) ttGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATc > 4:1413710/1‑150 (MQ=255) ccTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCCCCTCCTTTTTTGGGATA‑TCCGCATGACCCGGCCCCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGc < 1:37049/151‑1 (MQ=255) caggggggAGGATAGGGGGTCGGTATCACCCAGAAAAACCCCCCCCTGTTTTGGGATA‑CCCGAATGACCCGGCACCTCAC‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCcgc < 4:233402/146‑1 (MQ=255) ggggAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgccca > 1:52571/1‑151 (MQ=255) gggagtcattGGGGACGGTATAACCCGGGAAACCCCCCCCCGGTTTT‑GGATAGCCCTAATGAACCGGCCCCTCAG‑GCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccat < 4:1175868/142‑1 (MQ=255) gggAGGATATGGGTTGGAAATCCCCCAGAAAACTCCCCTCCTGTTTGGGCATC‑TCCACATAAACCGCCACCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccat < 4:639232/151‑1 (MQ=255) gggAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccat > 1:211963/1‑151 (MQ=255) ggcggatggggtgtgggTACCACCCGGGAAACTCCCCCCCCGTTTGGGTATA‑GCCGAACGACCGGGCCCCTCAC‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccatg < 2:106900/136‑1 (MQ=255) ggaTATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccatgcc > 3:272176/1‑150 (MQ=255) ggaTATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccatgcc > 1:130611/1‑150 (MQ=255) ggaTAGGGGGTCGGTATCACCCAGAAAAACCCCCTCCTGTTTTGGGATA‑CCCGCAGAACCCGCCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccatgccc < 2:717853/151‑1 (MQ=255) gaTATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccatgccc > 2:1414554/1‑150 (MQ=255) gaTATGGGGTCGGTATCACCCAGAAAAATCACCCCCTGTTTTGGGATA‑CCCGCATGAACCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccatgccc < 1:232847/150‑1 (MQ=255) gaTATGGGGTCGGTACCATCAAGAAAAACCCCCCCCTTTTTTGGAATT‑CCCGAATGACCCGGCCCCTCTT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccatgccc < 1:567916/150‑1 (MQ=255) atatGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccatgcccat > 4:1209039/1‑151 (MQ=255) atatGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccatgcccat > 1:95607/1‑151 (MQ=255) atGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAg > 1:505019/1‑151 (MQ=255) agggtgTCGGTATCATCGAGAAAAATCCCCCCCTTTTTTGGTATA‑CCCGTATAACCCGCCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATa < 4:862747/145‑1 (MQ=255) tGGGGGCGGTATCATCCAGAAAAATCCCCTCCTGTTTTGGGATA‑CCCGCATGAACCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGt < 1:523510/151‑1 (MQ=255) ggggTCGGTATCACCCAGAAAAATCCCCCCCTTTTTTGGGATA‑CCCGCATGACCCGGCCCCCCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTc < 4:811901/151‑1 (MQ=255) ggggTCGGTATCACCCAGAAAAACCCCCCCCTGTTTTGGGATA‑CCCGAATGAACCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTc < 4:1462430/151‑1 (MQ=255) gggTCGTTATCACCCAGAAAAATCACCTCCTTTTTTGGGATA‑TCCGCAGGACCGGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCa < 2:925204/151‑1 (MQ=255) gTCGGTATCATCCAGAAAAACCCCCTCCTTTTTTGGGATA‑CCCGCATGAACCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCAtt < 2:884473/151‑1 (MQ=255) cGGTATCATCCAGAAAAATCCCCTCCTGTTTTGGGATA‑CCCGCATGACCCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTg < 2:202534/150‑1 (MQ=255) cGGTATCACCCAGGAAAACCCCCCCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTgc < 2:575586/151‑1 (MQ=255) atcatcCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGcc > 2:1307807/1‑150 (MQ=255) catcCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAAt > 4:414145/1‑151 (MQ=255) agaaaaaTCCCCTCGTTTTTGGGGATA‑TCCGATTAAACGGCCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCt < 4:885935/148‑1 (MQ=255) gaaaaaTCCCCTCCTGTTTTGGGATA‑TCCGCATGACCCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTg < 2:125212/149‑1 (MQ=255) aaaccccccccttttttgGGGATA‑CCCGCATGAACCGGCCCTCCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGc < 3:532192/137‑1 (MQ=255) aaaTCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCt > 2:388822/1‑151 (MQ=255) aaTCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTg > 2:520079/1‑151 (MQ=255) cccctcctTTTTTGGGATA‑TCCGCAGGAACCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTgcgc < 2:1451366/149‑1 (MQ=255) cctGTTTTGGGATA‑TCCGCATGAACCGGCCCCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGt < 2:129098/151‑1 (MQ=255) tttttcGGGATT‑TCCGCTTAACCCGGC‑CCTCCTCCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGtt < 2:157594/148‑1 (MQ=255) gTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGtttt > 1:719/1‑151 (MQ=255) gTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGtttt > 1:286334/1‑151 (MQ=255) tttgGGGATA‑CCCGCATGACCCGCCACCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGtttt < 4:368302/150‑1 (MQ=255) tttGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCg > 4:1361533/1‑151 (MQ=255) tGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCgg > 4:577042/1‑150 (MQ=255) ggaatccccGCAGGACCCGCCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGa < 3:92982/143‑1 (MQ=255) gATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTc > 4:1354714/1‑151 (MQ=255) atcgccaggAACCGGCGCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAgg < 2:1304878/143‑1 (MQ=255) cccccATGACCCGGCACCTAAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAgg < 2:264808/146‑1 (MQ=255) ccGCATGACCCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGAt < 4:532321/151‑1 (MQ=255) cGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATg > 4:1418708/1‑151 (MQ=255) gcaacaaCCGCCACCACAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGc < 2:123669/146‑1 (MQ=255) gCATGACCCGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGc < 2:1406172/151‑1 (MQ=255) gAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTcc > 2:1020115/1‑151 (MQ=255) atccggcccttatt‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCt < 2:43688/138‑1 (MQ=255) aaCCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTc > 3:507462/1‑149 (MQ=255) ccGGCCCCTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTgc < 2:667469/151‑1 (MQ=255) ccGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTgc < 1:406918/151‑1 (MQ=255) cGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTgc > 4:1368391/1‑150 (MQ=255) gccACCTCAC‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTgcag < 4:858537/149‑1 (MQ=255) gccccTCAC‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTgcag < 3:90695/147‑1 (MQ=255) cccccTCAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTgcagc < 4:1276049/148‑1 (MQ=255) ccACCTAAT‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTgcagc < 4:568498/150‑1 (MQ=255) cccTCAC‑CCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTGCAGcac < 3:418941/150‑1 (MQ=255) aCCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTGCAGcac > 2:140213/1‑151 (MQ=255) | GTTATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGGCCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATA‑TCCGCATGAACCGGCACCTCAT‑ACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTGCAGCACACAC > NC_000913/298811‑299107 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |