Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,332,791 | 0 | A | C | 42.0% | 217.6 / 24.0 | 112 | V161G (GTG→GGG) | basS | sensory histidine kinase in two‑component regulatory system with BasR |
Reads supporting (aligned to +/- strand): ref base A (55/10); new base C (0/47); total (55/57) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.80e-22 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 112 total aligned reads displayed.
ATGTTGATAATTACCGGAAGAAAATGACTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGATTTCGAGGGTGGCGCTGTGAATGGCAATG > NC_000913/4332643‑4332937 | aTGTTGATAATTACCGGAAGAAAATGACTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCAcc < 1:542070/151‑1 (MQ=255) tGATAATTACCGGAAGAAAATGACTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCAccccc < 2:1347307/150‑1 (MQ=255) tGATAATTACCGGAAGAAAATGACTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCg > 2:723116/1‑151 (MQ=255) gATAATTACCGGAAGAAAATGACTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCg < 4:1397637/150‑1 (MQ=255) gATAATTACCGGAAGAAAATGACTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCg > 3:260718/1‑150 (MQ=255) gATAATTACCGGAAGAAAATGACTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGc < 2:1307382/151‑1 (MQ=255) gATAATTACCGGAAGAAAATGACTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGc > 4:247696/1‑151 (MQ=255) aTAATTACCGGAAGAAAATGACTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGcc > 2:577049/1‑151 (MQ=255) tAATTACCGGAAGAAAATGACTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGcc > 2:807437/1‑150 (MQ=255) aaTTACCGGAAGAAAATGACTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGcc > 4:1251911/1‑149 (MQ=255) aTTACCGGAAGAAAATGACTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGt > 2:321389/1‑151 (MQ=255) aCCGGAAGAAAATGACTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGc > 2:849704/1‑151 (MQ=255) ccGGAAGAAAATGACTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCTGTGGCg > 4:676387/1‑151 (MQ=255) ccGGAAGAAAATGACTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCg > 2:332318/1‑151 (MQ=255) aaaaaagggctccccGGCGGGCGGCAGCTGCAGCAGGGGGGGAACGCCCCCCATCATGTGATCAATCCGCCCCACTAGCGGCG‑CAACAAAAAGGTATTGCGTTTTCCCCATCAGTGCGAGATGCAAGCGCACCCCCGCCAGTGGCGTTCGc < 3:482757/138‑1 (MQ=255) aaTGCCTGTCCGGCCCGCGCCGTTTGCAGCAGCGGGGAGCCCCTCTCCACCACCTAATAAAGCCGTCCCACTAACGTTG‑CTACAAAAATGTGATGTGTTTTCGCCAGCATTTCCAGAGACAAACGCCCCCCCGCCAGTGGCGTTCGCAGtt < 4:1333057/151‑1 (MQ=255) aaTGCCTGCCCGCCCCGCCCCGGTTGCAGCAGCGGGGAGACGCTCTCCTTCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTCCGCCAGCAGTCCCAGATGAAAACCCCCCCCCGCCAGTGGCGTTCGCAGtt < 3:529448/151‑1 (MQ=255) aaTGACTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGtt > 2:661370/1‑151 (MQ=255) tcTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTg > 1:247924/2‑151 (MQ=255) aCTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTg > 2:1168954/1‑151 (MQ=255) tgcccGGCCCGCGCCAGTTGCAGCAGCGGGGAGCCCCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTgcg < 3:91672/148‑1 (MQ=255) tgcccGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCATTTCCAGATGCAACCGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTgcg < 1:413811/148‑1 (MQ=255) gcccGGCCCGCGCCAGTTGCAGCGGGTGGGAGCCCCTCTCCATCATCTGACAAAGCCGTGCCACTACCGGTG‑CTACATCAATGTGATGCTTTTTCGCCAGCAGTTCAAGAGGCAAACGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTgcgc < 4:1221656/149‑1 (MQ=255) ccGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGcgcg > 4:648706/1‑150 (MQ=255) gcccgcgCCAGTTGCAGCGGCGGGGAGACGCTCTCCATCATCTGATCAGGCCGTGCCACTAACGGTG‑CTACATAAATGTGATGCGTTTTCGCCAGAAGTTCCAGATGAAACCGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGt < 2:232274/148‑1 (MQ=255) cctctcccgttcccggcagcTGGGAGCCCCTCCCCATCATCTAACAAAGCCGGGCCACTACCGGTG‑CTACATCATTGTGATGCGTTTCCGCCGGCGGTTCCAGATGCAAACGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTc < 4:1261387/136‑1 (MQ=255) cACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTc > 2:850435/1‑151 (MQ=255) gcgcCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGc > 2:122764/1‑151 (MQ=255) gcgcCAGTTGCAGCAGCGGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCATTTCCAGATGCAAACGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGc < 2:1216375/151‑1 (MQ=255) cgcCATTTGCAGCGGGGGGGAGCCCCTCCCCATCATCTGATCAAGCCGGCCCACTAACGGTG‑CTACATAAAGGGGATGCGTTTCCGCCAGCATTTCAAGATGCAACCGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCg < 4:1343030/151‑1 (MQ=255) cgcCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCg > 4:961436/1‑151 (MQ=255) aGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTa > 2:585275/1‑150 (MQ=255) aGTTGCAGCAGCGGGGAGACGCTCCCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCTTTTGCGCCAGCATTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTaa < 2:552711/151‑1 (MQ=255) gTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTaa > 2:1138958/1‑150 (MQ=255) ttGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAaac > 2:1448205/1‑151 (MQ=255) tGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAaac > 4:1422633/1‑150 (MQ=255) gcagcgGCTGGGAGCCGCTCCCCATCATCTGATCAAGCCGTGCCACAAACGGTG‑CTACATAAATGGGATGCTTTTCCGCCAGCAGTTCCAGATGCAACCGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAaaca < 4:574520/150‑1 (MQ=255) gcagcgGCGGGGAGACGCTCTCCATCATCTGATAAAGCCGTCCCACTAACGGTG‑CTACATCAGTGTGATGCGTTTTCGCCAGCAGTCCCAGATGCAAACGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAaaca < 4:1399978/150‑1 (MQ=255) cagcagCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTc > 2:1261387/1‑138 (MQ=255) agcagcTGGGAGCCGCTCCCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTCCGCCAGCATTCCCAGATGAAACCGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAAcc < 2:313641/151‑1 (MQ=255) gcTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCttt > 3:10631/1‑150 (MQ=255) tGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGt > 4:790462/1‑151 (MQ=255) gggAGCCGCTCTCCATCATCTGATCAGGCCGTGCCACAACCGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTCCCAGATGCAAACGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGtt < 2:361844/151‑1 (MQ=255) gggcccttttcCACCATTTGACAAACCCGCGCCAAAAGCGGTG‑CTACATAAAGGTGATGGTTTTGGGCCAGGAGTTCCAGAGGAAACCGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTAt < 4:1049955/142‑1 (MQ=255) cccctccCCTTCTTCTGATCAGGCCGTGCCACGAGCGGTG‑CTACATCAATGTGATGCGTTCTCCCAACCCTTTCCAGAGCAAAACGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATcc < 3:120655/147‑1 (MQ=255) accctctCCATCATCTGACAAAGCCGTGCCACTACGGGTG‑CTACATAAATGTGAGGCTTTTCCGCCAGAATTTCCAGAGCCAAACCCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATcc < 1:384893/147‑1 (MQ=255) accccctcCATCATCTAACAAACCGGTCCAACAAACGGTG‑CTACAACAATGGGATGCGTTTCCGCCAGAAGTCCCAGATAAAACCCCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATcc < 3:399533/145‑1 (MQ=255) cGCTCTCCATCATCTGATCAAGCCGTGCCACTAAGGGTG‑CTACACCAATGTGATGCTTTTTCGCCAGCAGTTCCAGATGAAAACGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAg < 3:492628/151‑1 (MQ=255) ctcCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTg > 2:266344/1‑151 (MQ=255) ctcCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTg > 3:346466/1‑151 (MQ=255) ccccaccaTCTAACAAAGCCGTGCCACTACCGGTG‑CTACATAAATGTGTTTTTTTTTCGCCAGCTGTCCCAGATCCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCg < 4:1142884/147‑1 (MQ=255) tcattTGATCAAGCCGTGCCACTACCGGTG‑CAACATCATTGTGATGCTTTTCCCCAACCATTTCCAGATGCAACCCCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTg < 2:851213/149‑1 (MQ=255) catcGGATCAGCCCGTCCCACTACCGGTT‑CTACATCATTGTGATGCTTTTTCGCCAGCAGTTCCAGATGAAAACGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTc < 2:255772/151‑1 (MQ=255) catcGGATCAAGCCGTGCCACTAACGGTC‑CACAATCAAGGTGATGCTTTTCCGCCAGCAGTTCCAAATGAAACCGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTc < 1:37919/151‑1 (MQ=255) tcggaccaggcggTGCCACTAACGGTG‑CTACAACAATGTGATGTGTTTTCCCCAGCAGTTCAAGGGGCAACCCCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCa < 4:381647/138‑1 (MQ=255) tGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGc > 4:1025744/1‑151 (MQ=255) tGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGc > 2:396611/1‑151 (MQ=255) accAAGCCGTGCCACTACCGGTG‑CTACATCAATGTGATGCTTTTTCGCCAGCAGTCCCAGATGCAAACCCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCg < 3:262126/148‑1 (MQ=255) aaGCCGGGCCAC‑AACGGGGCCTACATAAATGGGAGGCGTTTTCGCCAGCGGTGCCAGATGAAAACGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTg < 2:1423709/151‑1 (MQ=255) ngTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGAcc > 4:529027/2‑150 (MQ=255) cGTGCCATTAAGGTTG‑CTACAAAATGGTGATGCTTTTTCGCAAGCTTTTCCAGATGCAAACGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCa < 4:1126654/151‑1 (MQ=255) gTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCATCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAg > 1:192546/1‑151 (MQ=255) gTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGAcc > 2:312543/1‑149 (MQ=255) gTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGAcc > 4:648105/1‑149 (MQ=255) accGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAACCGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGtt < 2:805177/147‑1 (MQ=255) aaggggg‑CTCCATAAATGTGTTGTTTTTCCCCCAGCATTTCCAGAGGAAACCGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGtt < 4:1322088/143‑1 (MQ=255) aaCGTTG‑CTACACAAATTTGATGCGTTTTCGCCAGCATTTCCAAAGGCAAGCGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGtt < 2:612915/149‑1 (MQ=255) aaCGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGttt > 4:183917/1‑150 (MQ=255) aaCGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGttt > 2:1209004/1‑150 (MQ=255) gggTG‑CTACATAAATGTGATGTGTTTCCGCCAGCCGTCCCAGATGCAAACCCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAAc < 2:514418/150‑1 (MQ=255) gTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACg > 1:394556/1‑150 (MQ=255) gTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGGTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGc > 4:154161/1‑151 (MQ=255) tG‑CTACATCAATGTGATGCTTTTTCGCCAGCAGTTCCAGATGCAACCGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGc < 1:378462/150‑1 (MQ=255) tG‑CTACATCAATGTGATGCTTTTCCGCCAGCATTCCCAGATGCAAACGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGc < 1:299264/150‑1 (MQ=255) tG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGcc > 4:105076/1‑151 (MQ=255) tG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGc > 1:403818/1‑150 (MQ=255) caCATAATTGTGATGCTTTTCCGCCAGCGGTCCCAGATGCAACCGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGaa < 2:77578/150‑1 (MQ=255) aCATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGaaa > 1:312453/1‑151 (MQ=255) aCATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGaaa > 3:324255/1‑151 (MQ=255) aCATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGaaa > 3:463339/1‑151 (MQ=255) cATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGaaa > 3:262991/1‑150 (MQ=255) aTCAATGTGTGGCGTTTCCGCCAGCAGTTCCAGATGCAAACGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAacc < 3:93764/151‑1 (MQ=255) cAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAACCGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAacca < 2:148488/150‑1 (MQ=255) aaTGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAaccacc > 4:928651/1‑151 (MQ=255) ggCGTTTTCGCCAGGCTTCCCAGGTGCAAACGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGa < 2:247692/150‑1 (MQ=255) ccGCAAGCAGTCCCAGATGCAAACGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGATTTCGAg < 4:661367/150‑1 (MQ=255) cccAGCAGTTCCAGATGAAAACCCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGATTTCGAggg < 2:676390/150‑1 (MQ=255) ccAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGATTTCGAGGGt > 2:1293594/1‑151 (MQ=255) agctgTGCCAGAGCCAAACGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGATTTCGAGGGTgg < 4:1411128/151‑1 (MQ=255) agcagTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGATTTCGAGGGTgg > 2:1331069/1‑151 (MQ=255) attcccAGATGCAACCCCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGATTTCGAGGGTGgcgc < 3:270175/147‑1 (MQ=255) gtcccAGAGGCAAACCCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGATTTCGAGGGTGGCGCt < 4:723113/148‑1 (MQ=255) gTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGATTTCGAGGGTGgcg > 3:480540/1‑149 (MQ=255) tCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGATTTCGAGGGTGGCGCtgt > 2:786856/1‑151 (MQ=255) ccAGATGCAAACCCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGATTTCGAGGGTGGCGCtgtg < 4:1439846/151‑1 (MQ=255) aGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGATTTCGAGGGTGGCGCTGTGa > 4:383498/1‑150 (MQ=255) aggCAACCGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGATTTCGAGGGTGGCGCTGTGAATg < 4:410841/149‑1 (MQ=255) aaaCGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGATTTCGAGGGTGGCGCTGTGAATGGCa > 4:1254564/1‑150 (MQ=255) aCGCCCCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGATTTCGAGGGTGGCGCTGTGAATGGCAATg < 4:332323/151‑1 (MQ=255) aCGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGATTTCGAGGGTGGCGCTGTGAATGGCAATg > 1:185642/1‑151 (MQ=255) | ATGTTGATAATTACCGGAAGAAAATGACTGTCCGGCACGCGCCAGTTGCAGCAGCTGGGAGACGCTCTCCATCATCTGATCAAGCCGTGCCACTAACGGTG‑CTACATCAATGTGATGCGTTTTCGCCAGCAGTTCCAGATGCAAACGCACCCCCGCCAGTGGCGTTCGCAGTTCGTGCGCGACGTCAGCGGTAAACAACCTTTCGTTATCCAGCGTGCTGGTCAGGCGACTGACCAGATCGTTTAACGCCGAAACCACCGCTTCGATTTCGAGGGTGGCGCTGTGAATGGCAATG > NC_000913/4332643‑4332937 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |