| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4227233 = | 19 (0.940) | 3 (0.160) | 3/280 | 2.1 | 20.1% | coding (3406/3684 nt) | metH | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent |
| ? | NC_000913 | 4227352 = | 6 (0.310) | coding (3525/3684 nt) | metH | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent | |||||
ATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAGCTGCTGGAAGTGGAAAAACACACTGGCATGAAACTCACAGAATCTTTCGCCATGTGGCCCGGTGCATCGGTTTCGGGTTGGTA > NC_000913/4227086‑4227369 | taccccagattcggtgccagccagcgctcaacttcggtaacgctcatacctttacggcgggcataatcttcaacctgatcgcgctgaatttgtgctacagcgtagtacttgctgtccgggtggctgaagtaccaacccgaaaccgatGCAc > 2:77152‑M1/148‑151 (MQ=255)aTGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCAc < 2:39401/151‑1 (MQ=255) ccccagattcggtgtcagccagcgctcaacttcggtaacgctcatacctttacggcgggcctaattttcaacctgatcgcgctgaatttgtgctacagcggagtacttgctgttcgggtgggtgaagtaacaaaccgaaaacgaaGCAcc < 1:133569‑M1/5‑1 (MQ=255) ttAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAAc < 1:70637/151‑1 (MQ=255) cTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGaaaaa > 1:276608/1‑151 (MQ=255) gTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCAt > 2:304252/1‑150 (MQ=255) tATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATc < 2:36002/150‑1 (MQ=255) aTCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCAt > 1:75679/1‑148 (MQ=255) cctttacggcgggcataatcttcaacctgatcgcgctgaatttgtgctacagcgtagtacttgctgtccgggtggctgaagtaccaacccgaaaccgatGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTggg > 2:38880‑M1/100‑151 (MQ=255) tcCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGa < 2:101777/151‑1 (MQ=255) ccATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAg < 1:307874/151‑1 (MQ=255) aGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAgctg > 2:166998/1‑149 (MQ=255) tgCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAGCTGCTGGAAGt < 2:149804/151‑1 (MQ=255) gTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAGCTGCTGGAAGTGGaaaaa > 2:318294/1‑150 (MQ=255) tCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAGCTGCTGGAAGTGGAAAAac < 1:72370/150‑1 (MQ=255) acctgatcgcgctgaatttgtgctacagcgtagtacttgctgtccgggtggctgaagtaccaacccgaaaccgctGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGACACCATCTGGGAGCTGCTGGCAGTGGAAAAacaca < 2:42906‑M1/76‑1 (MQ=255) cAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAGCTGCTGGAAGTGGAAAAACACACTGGCATGAAACTCACAGAATCTTTCGCCAtg < 1:98438/151‑1 (MQ=255) aCGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAGCTGCTGGAAGTGGAAAAACACACTGGCATGAAACTCACAGAATCTTTCGCCAtgtg < 1:57692/151‑1 (MQ=255) gAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAGCTGCTGGAAGTGGAAAAACACACTGGCATGAAACTCACAGAATCTTTCGCCATGTgg > 2:22167/1‑150 (MQ=255) cTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAGCTGCTGGAAGTGGAAAAACACACTGGCATGAAACTCACAGAATCTTTCGCCATGTGGCCCGGTg < 2:99273/151‑1 (MQ=255) gATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAGCTGCTGGAAGTGGAAAAACACACTGGCATGAAACTCACAGAATCTTTCGCCATGTGGCCCGGTGCa > 2:259511/1‑151 (MQ=255) tCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAGCTGCTGGAAGTGGAAAAACACACTGGCATGAAACTCACAGAATCTTTCGCCATGTGGCCCGGTGCATc < 2:192143/151‑1 (MQ=255) cTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAGCTGCTGGAAGTGGAAAAACACACTGGCATGAAACTCACAGAATCTTTCGCCATGTGGCCCGGTGCATCGGTTTCGGGt > 1:229076/1‑151 (MQ=255) cccgaaaccgatGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAGCTGCTGGAAGTGGAAAAACACACTGGCATGAAACTCACAGAATCTTTCGCCATGTGGCCCGGTGCATCGGTTTCGGGTTGGTa < 2:264566‑M1/137‑1 (MQ=255) | ATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAGCTGCTGGAAGTGGAAAAACACACTGGCATGAAACTCACAGAATCTTTCGCCATGTGGCCCGGTGCATCGGTTTCGGGTTGGTA > NC_000913/4227086‑4227369 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |