New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 3619878 = | NA (NA) | 6 (0.180) | 5/278 | 2.4 | 100% | coding (687/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
? | NC_000913 | 3619892 = | 0 (0.000) | coding (701/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
GCTGCTCGGTTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCTGCCGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGA > NC_000913/3619743‑3619993 | ccggcagggtatcaggaaaagcggacggttccgtcccgccggaaatggcctgctgccgggcttcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgatttcgccgctgaatTc < 2:471572‑M2/2‑1 (MQ=255) tcttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgaattcagcggcgaaaTCACCGGCGTGACGGATGGCGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCg > 1:142149‑M2/88‑151 (MQ=255) cttctgcccgctgcgcctgcgtggtcagtaccagccggaagtgacgcccggcaccatccgtcacgccggtgaattcagcggcgaaaTCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCgg > 2:339182‑M2/87‑151 (MQ=255) ccgctgcgcctgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgaattcagcggcgaaaTCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCagaag > 2:397738‑M2/80‑151 (MQ=255) tgcgtggtcagtaccagccggaagtgacgccaggcaccatccgtcacgccggtgaattcagcggcgaaaTCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGgca > 2:296507‑M2/70‑151 (MQ=255) agccggaagtgacgccaggcaccatccgtcacgccggtgaattcagcggcgaaaTCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCcgg > 2:165518‑M2/55‑151 (MQ=255) gaagtgacgccaggcaccatccgtcacgccggtgaattcagcggcgaaaTCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGa > 2:92066‑M2/50‑151 (MQ=255) | GCTGCTCGGTTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCTGCCGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGA > NC_000913/3619743‑3619993 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |