New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 398392	18 (0.600)	5 (0.190)	4/270	2.3	24.2%	coding (521/1095 nt)	yaiW	microcin Bac7 uptake protein; outer membrane surface‑exposed lipoprotein
	?	NC_000913	= 398378	15 (0.560)					coding (507/1095 nt)	yaiW	microcin Bac7 uptake protein; outer membrane surface‑exposed lipoprotein

CTAAAAATCAAATCGCCAAACGGCAAAAGTTATAGCGAACGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/398241‑398392 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggtgcgcaccggATTGAGCGAACCAAACAGCGTCTGCCCCATTGGCACCATGTTGATCAGATCGTCAAAAATCGCGCTCAATTGCTTTTCTGTACGCACCGAATCTAACCGTTCGCTATAACTTTTGCCGTTTGGCGATTTGATTTTTAGCGCGGTATGAA  <  NC_000913/398378‑398230                                                                                                                                                                                                                                                                                                               CTAAAAATCAAATCGCCAAACGGCAAAAGTTATAGCGAACGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACC                                                                                                                                                         <  2:352419/150‑1    AAAATCAAATCGCCAAACGGCAAAAGTTATAGCGAACGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGAT                                                                                                                                                     <  2:468936/151‑1                                           TTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTGTTGACGCTCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGATTGAGCGAACCAAACAGCGTCTGCCCCATTGGCACCATGT                                                                                                              <  1:246615/151‑1                                                                                             GATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGATTGAGCGAACCAAACAGCGTCTGCCCCATTGGCACCATGTTGATCAGATCGTCAAAAATCGCGCTCAATTGCTTTTCTGTACGCACCGAA                                                            >  1:37906/1‑151                                                                                                                           GTTTGGTTCGCTCAATCCGGTGCGCACCGGATTGAGCGAACCAAACAGCGTCTGCCCCATTGGCACCATGTTGATCAGATCGTCAAAAATCGCGCTCAATTGCTTTTCTGTACGCACCGAATCTAACCGTTCGCTATAACTTTTGCCGTTT                              >  1:91712/1‑151                                                                                                                           GTTTGGTTCGCTCAATCCGGTGCGCACCGGATTGAGCGAACCAAACAGCGTCTGCCCCATTGGCACCATGTTGATCAGATCGTCAAAAATCGCGCTCAATTGCTTTTCTGTACGCACCGAATCTAACCGTTCGCTATAACTTTTGCCGTTT                              >  2:31795/1‑151                                                                                                                                              GTGCGCAACGGATTGAGCGAAACAAACAGCGTATGCCAAATTGGCACCATGTTGATCAGATCGTCAAAAATCGCGCTGAATTGCTTTTCTGTACGCACCGAATCTAACCGTTCGCTATAACTTTTGCCGTTTGGCGATTTGATTTTTAGCG           >  1:355259/1‑151                                                                                                                                                       GGATTGAGCGAACCAAACAGCGTCTGCCCCATTGGCACCATGTTGATCAGATCGTCAAAAATCGCGCTCAATTGCTTTTCTGTACGCACCGAATCTAACCGTTCGCTATAACTTTTGCCGTTTGGCGATTTGATTTTTAGCGCGGTATGAA  >  2:310645/1‑151                                                                                                                                                                                                                                                                                                               CTAAAAATCAAATCGCCAAACGGCAAAAGTTATAGCGAACGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/398241‑398392 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggtgcgcaccggATTGAGCGAACCAAACAGCGTCTGCCCCATTGGCACCATGTTGATCAGATCGTCAAAAATCGCGCTCAATTGCTTTTCTGTACGCACCGAATCTAACCGTTCGCTATAACTTTTGCCGTTTGGCGATTTGATTTTTAGCGCGGTATGAA  <  NC_000913/398378‑398230

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.