New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2713829	29 (0.970)	7 (0.250)	6/276	1.8	20.9%	coding (934/1335 nt)	srmB	ATP‑dependent RNA helicase
	?	NC_000913	= 2713908	26 (0.940)					coding (1013/1335 nt)	srmB	ATP‑dependent RNA helicase

TGGCTGCGCGAAGCGGGCATCAACAACTGCTATCTCGAAGGTGAGATGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCACCGTATCGGACGTACCGCGCGCGCCGGTCGTAAAGGCACCGCAATTTCGCTGGTGGAAGCCCATGACCATCTGCTGCTGGGT  >  NC_000913/2713694‑2713978                                                                                                                                        |                                                                                                                                                      tGGCTGCGCGAAGCGGGCATCAACAACTGCTATCTCGAAGGTGAGATGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACg                                                                                                                                        <  2:231879/151‑1 (MQ=255)           aaGCGGGCATCAACAACTGCTATCTCGAAGGTGAGATGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGt                                                                                                                              >  1:224811/1‑151 (MQ=255)                  cATCAACAACTGCTATCTCGAAGGTGAGATGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAGGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCTCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAAc                                                                                                                       <  1:242648/151‑1 (MQ=255)                  cATCAACAACTGCTATCTCGAAGGTGAGATGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTaa                                                                                                                        <  2:249206/150‑1 (MQ=255)                   aTCAACAACTGCTATCTCGAAGGTGAGATGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTaa                                                                                                                        >  2:204507/1‑149 (MQ=255)                     caacaaCTGCTATCTCGAAGGTGAGATGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACtt                                                                                                                     >  2:334006/1‑150 (MQ=255)                     caacaaATGCTATCTCGAAGGTGAGATGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACtt                                                                                                                     >  1:247912/1‑150 (MQ=255)                        caacTGCTATCTCGAAGGTGAGATGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGat                                                                                                                 <  2:76653/151‑1 (MQ=255)                                  ctcGAAGGTGAGATGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCa                                                                                                       >  1:75957/1‑151 (MQ=255)                                          tGAGATGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGAt                                                                                               <  1:31812/151‑1 (MQ=255)                                            agaTGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATa                                                                                              >  2:237202/1‑150 (MQ=255)                                            agaTGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATa                                                                                              >  1:183885/1‑150 (MQ=255)                                              aTGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACtt                                                                                           >  2:130176/1‑151 (MQ=255)                                              aTGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACtt                                                                                           >  1:104341/1‑151 (MQ=255)                                              aTGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACtt                                                                                           <  1:306673/151‑1 (MQ=255)                                                 gTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTAcgtccgatacggtgcaaataagtatcgccactgcgcggcatatcgaagttaaagacgtgg                                                                                           >  2:54564‑M1/1‑88 (MQ=255)                                                 gTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTAtt                                                                                        >  2:245201/1‑151 (MQ=255)                                                 gTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTAtt                                                                                        >  2:185172/1‑151 (MQ=255)                                                 gTACAGGGCAAGCGTAAAGAAGCGATCAAGCGGTTGACCGAAGGTCGCGTAAACGTACTGGTAGCAACCGATGTTGCCGCGCGCGGTAcgtccgatacggtgcaaataagaatcgccactgcgcggcatatcgaagttacagccgtgt                                                                                           >  1:255274‑M1/1‑88 (MQ=255)                                                      gggCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCa                                                                                    >  1:370957/1‑150 (MQ=255)                                                      gggCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCa                                                                                    >  1:165024/1‑150 (MQ=255)                                                       ggCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCAc                                                                                   <  2:374451/150‑1 (MQ=255)                                                       ggCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCAc                                                                                   <  2:313712/150‑1 (MQ=255)                                                       ggCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCAc                                                                                   <  2:380504/150‑1 (MQ=255)                                                            gCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTAcgtccgatacggtgcaaataagtatcgccactgcgcggcatatcgaagttaaagacgtggctgacgtcaggaat                                                                             >  2:449659‑M1/1‑77 (MQ=255)                                                             cGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCACCGTAt                                                                              <  2:13277/149‑1 (MQ=255)                                                                aaCGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCACCGTATCGGAc                                                                         <  1:331768/151‑1 (MQ=255)                                                                       cGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCACCGTATCGGACGtaccg                                                                   >  1:9287‑M2/1‑145 (MQ=255)                                                                       cGATCAAGCGTTTGACCGAAGGTCGCGTAAACATACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCACCGTATCGGACGtaccg                                                                   >  2:436826‑M2/1‑145 (MQ=255)                                                                        gATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTAcgtccgatacggtgcaaataagtatcgccactgcgcggcatatcgaagttaaagacgtggctgacgtcaggaatgtcgataccgcg                                                                 >  2:36075‑M1/1‑65 (MQ=255)                                                                                     aCCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCACCGTATCGGACGTACCGCGCGCGCCGGTCGTa                                                    >  2:218472/1‑151 (MQ=255)                                                                                         aaGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCACCGTATCGGACGtaccgcgcgcggcaacatcggttg                                                >  2:319325‑M2/1‑127 (MQ=255)                                                                                              cgcgTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATGCTTATTTGCACCGTATCGGACGtaccgcgcgcggcaacatcggttgcgacc                                           >  1:150555‑M2/1‑122 (MQ=255)                                                                                                  tAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCACCGTATCGGACGTACCGCGCGCGCCGGTCGTAAAGGCACCGCAAt                                       >  1:394488/1‑151 (MQ=255)                                                                                                    aaCGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTAcgtccgatacggtgcaaataagtatcgccactgcgcggcatatcgaagttaaagacgtggctgacgtcaggaatgtcgataccgcgcgcggcaacatcggttgcgaccagtacg                                     >  1:390134‑M1/1‑37 (MQ=255)                                                                                                      cGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCACCGTATCGGACGtaccgcgcgcggcaacatcggttgcgaccagtacgtt                                   >  1:390134‑M2/1‑114 (MQ=255)                                                                                                            ggTCGCAACCGATGTTGCCGCGCGCGGTAcgtccgatacggtgcaaataagcatcgccactgcgcggcatatcgaagttaaagacgtggctgacgtcaggaatgtcgataccgcgcgcggcaacatcggttgcgaccagtacgtttacgcg                             >  1:150555‑M1/1‑29 (MQ=255)                                                                                                                 cAACCGATGTTGCCGCGCGCGGTAcgtccgatacggtgcaaataagtatcgccactgcgcggcatatcgaagttaaagacgtggctgacgtcaggaatgtcgataccgcgcgcggcaacatcggttgcgaccagtacgtttacgcgacctt                        >  2:319325‑M1/1‑24 (MQ=255)                                                                                                                                  tgcgGCATCGACATTCCGGACGTCAACCACGTCTTTAGGTGCTATATGCCGCACAGTGGCGATACTTATTTGCACCGTGGCGGACGGGCCCCGCGCGCCGGTCGTAAAGGCACCGCAATTTCGCTGGGGGAAGCCCATGACCATctgcagc       <  1:371733/150‑1 (MQ=255)                                                                                                                                  cgcgGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCACCGTATCGGACGtaccgcgcgcggcaacatcggttgcgaccagtacgtttacgcgaccttcggtcaaacgcttgatc       >  2:36075‑M2/1‑86 (MQ=255)                                                                                                                                    cgGTAcgtccgatacggtgcaaataagtatcgccactgcgcggcatatcgaagttaaagacgtggctgacgtcaggaatgtcgataccgcgcgcggcaacatcggttgcgaccagtatgtttacgcgaccttcggtcaaacgcttgatcg      >  2:436826‑M1/1‑5 (MQ=255)                                                                                                                                    cgGTAcgtccgatacggtgcaaataagtatcgccactgcgcggcatatcgaagttaaagacgtggctgacgtcaggaatgtcgataccgcgcgcggcaacatcggttgcgaccagtacgtttacgcgaccttcggtcaaacgcttgatcg      >  1:9287‑M1/1‑5 (MQ=255)                                                                                                                                      gTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCACCGTATCGGACGTACCGCGCGCGCCGGTCGTAAAGGCACCGCAATTTCGCTGGTGGAAGCCCATGACCATCTGCTGCTggg   >  2:203839/1‑151 (MQ=255)                                                                                                                                       tATCGACATTCCTGACGGCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCACCGTATCGGACGTACCGCGCGCGCCGGTCGTAAAGGCACCGCAATTTCGCTGGTGGAAGCCCATGACCATCTGCTGCTGGGt  <  2:75957/151‑1 (MQ=255)                                                                                                                                        |                                                                                                                                                      TGGCTGCGCGAAGCGGGCATCAACAACTGCTATCTCGAAGGTGAGATGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCACCGTATCGGACGTACCGCGCGCGCCGGTCGTAAAGGCACCGCAATTTCGCTGGTGGAAGCCCATGACCATCTGCTGCTGGGT  >  NC_000913/2713694‑2713978

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.