New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2375202 =	13 (0.440)	6 (0.210)	6/282	1.8	36.0%	coding (761/963 nt)	menC	O‑succinylbenzoyl‑CoA synthase
	?	NC_000913	2375281 =	9 (0.320)					coding (682/963 nt)	menC	O‑succinylbenzoyl‑CoA synthase

CAATCCGCGCCAGTTGCGTTAAGCCTAAGCTCGATTCAATGGAAGAACTGATCACCGCCGTCAGCCCCAGCGCGTGCGCCGCCTGTACCTGCTCGCGTACTTTTTCCAGACTGCCCGTGAGCGTGGGTTTGATAACTACCGCGCGCACGCCCTCTTCAGCCACAAAGGCAAAATCCGGCTCGCGCAGGCTTTCATCCCAGGCAATGGCAATGCCGGTTTCACGGGCAAACGCTCGCGAATCATCGCGGGTTTTGCACGGCTCTTCGAGAAACGCGATGCGG  >  NC_000913/2375131‑2375411                                                                                                                                                       |                                                                                                                                   tgaaaccggcattgccattgcctgggatgaaagcctgcgcgagccggattttgcctttgtggctgaagagggcgtgcgcgcggtagttatcaaacccacgctcacgggcagtctggaaaaagtacgcgagcaggtacaggcggcgcacgcc                                                                                                                                    <  2:129315‑M2/1‑1 (MQ=255)    aaccggcattgccattgcctgggatgaaagcctgcgcgagccggattttgcctttgtggctgaagaggGCGTGCGCCGCCTGTACCTGCTCGCGTACTTTTTCCAGACTGCCCGTGCGCGTGGGTTTGATAACTACCGCGCGCACGCCct                                                                                                                                  <  1:321852‑M1/82‑1 (MQ=255)        cgcCAGTTGCGTTAAGCCTAAGCTCGATTCAATGGAAGAACTGATCCCCGCCGTCAGCCCCAGCGCGTGCGCCGCCTGTACCTGCTCGCGTACTTTTTCCAGACTGCCCGTGAGCGTGGGTTTGATAACTACCGCGCGCACGCGctggggc                                                                                                                             <  1:69460/151‑6 (MQ=255)          cattgccattgcctgggatgaaagcctgcgcgagccggattttgcctttgtggctgaagagggcgtgcgcgcggtagttatcaaacccacgctcacgggcagtctggaaaaagtacgcgagcaggtacaggcggcgcacgcCCTCTTCAGc                                                                                                                           <  2:192956‑M2/10‑1 (MQ=255)                          gatgaaagcctgcgcgagccggattttgcctttgtggctgaagaggGCGTGCGCCGCCTGTACCTGCTCGCGTACTTTTTCCAGACTGCCCGTGAGCGTGGGTTTGATAACTACCGCGCGCACGCCCTCTTCAGCCACAAAGGCAAAATc                                                                                                            <  1:361801‑M1/104‑1 (MQ=255)                                 gcctgcgcgagccggattttgcctttgtggctgaagaggGCGTGCGCCGCCTGTACCTGCTCGCGTACTTTTTCCAGACTGCCCGTGAGCGTGGGTTTGATAACTACCGCGCGCACGCCCTCTTCAGCCACAAAGGCAAAATCCGGCTcg                                                                                                     <  2:110300‑M1/111‑1 (MQ=255)                                        cgagccggattttgcctttgtggctgaagagggcgtgcgcgcggtagttatcaaacccacgctcacgggcagtctggaaaaagtacgcgagcaggtacaggcggcgcacgcCCTCTTCAGCCACAAAGGCAAAATCCGGCTCGCGCAGGc                                                                                              <  2:110300‑M2/39‑1 (MQ=255)                                               gattttgcctttgtggctgaagagggcgtgcgcgcggtagttatcaaacccacgctcacgggcagtctggaaaaagtacgcgagcaggtacaggcggcgcacgcCCTCTTCAGCCACAAAGGCAAAATCCGGCTCGCGCAGGCTTTCATc                                                                                       <  1:361801‑M2/46‑1 (MQ=255)                                                          ccgTCAGCCCCAGCGCGTGCGCCGCCTGTACCTGCTCGCGTACTTTTTCCAGACTGCCCGTGAGCGTGGGTTTGATAACTACCGCGCGCACGCCCTCTTCAGCCACAAAGGCAAAATCCGGCTCGCGCAGGCTTTCATCCCAggcaatggc                                                                           <  1:319378/151‑1 (MQ=255)                                                             tCAGCCCCAGCGCGTGCGCCGCCTGTACCTGCTCGCGTACTTTTTCCAGACTGCCCGTGAGCGTGGGTTTGATAACTACCGCGCGCACGCCCTCTTCAGCCACAAAGGCAAAATCCGGCTCGCGCAGGCTTTCATCCCAggcaatggcaa                                                                         <  2:273672/150‑1 (MQ=255)                                                              gctgaagaggGCGTGCGCCGCCTGTACCTGCTCGCGTACTTTTTCCAGACTGCCCGTGAGCGTGGGTTTGATAACTACCGCGCGCACGCCCTCTTCAGCCACAAAGGCAAAATCCGGCTCGCGCAGGCTTTCATCCCAGgcaatggcaatg                                                                       <  2:192956‑M1/141‑1 (MQ=255)                                                                     agggcgtgcgcgcggtagttatcaaacccacgcgcacgggcagtctggaaaaagtacgcgagcaggtacaggcggcgcacgcCCTCTTCAGCCACAAAGGCAAAATCCGGCTCGCGCAGGCTTTCATCCCAGGCAATGGCAATGCCGGtt                                                                 <  1:321852‑M2/68‑1 (MQ=255)                                                                       gGCGTGCGCCGCCTGTACCTGCTCGCGTACTTTTTCCAGACTGCCCGTGAGCGTGGGTTTGATAACTACCGCGCGCACGCCCTCTTCAGCCACAAAGGCAAAATCCGGCTCGCGCAGGCTTTCATCCCAGGCAATGGCAATGCCGGTTTCa                                                              <  2:129315‑M1/150‑1 (MQ=255)                                                                                         cTGCTCGCGTACTTTTTCCAGACTGCCCGTGAGCGTGGGTTTGATAACTACCGCGCGCACGCCCTCTTCAGCCACAAAGGCAAAATCCGGCTCGCGCAGGCTTTCATCCCAGGCAATGGCAATGCCGGTTTCACGGGCAAACGCTCGCGaa                                            <  1:419937/151‑1 (MQ=255)                                                                                                   cgctcacgggcagtctggaaaaagtacgcgagcaggtacaggcggcgcacgcCCTCTTCAGCCACAAAGGCAAAATCCGGCTCGCGCAGGCTTTCATCCCAGGCAATGGCAATGCCGGTTTCACGGGCAAACGCTCGCGAATCATCGCggg                                  <  1:143915‑M2/99‑1 (MQ=255)                                                                                                       tttCCAGACTGCCCGTGAGCGTGGGTTTGATAACTACCGCGCGCACGCCCTCTTCAGCCACAAAGGCAAAATCCGGCTCGCGCAGGCTTTCATCCCAGGCAATGGCAATGCCGGTTTCACGGGCAAACGCTCGCGAATCATCGCGGGtttt                              >  1:370395/1‑151 (MQ=255)                                                                                                                      tGAGCGTGGGTTTGATAACTACCGCGCGCACGCCCTCTTCAGCCACAAAGGCAAAATCCGGCTCGCGCAGGCTTTCATCCCAGGCAATGGCAATGCCGGTTTCACGGGCAAACGCTCGCGAATCATCGCGGGTTTTGCACGGCTCTTCgag               <  2:32574/151‑1 (MQ=255)                                                                                                                                tttGATAACTACCGCGCGCACGCCCTCTTCAGCCACAAAGGCAAAATCCGGCTCGCGCAGGCTTTCATCCCAGGCAATGGCAATGCCGGTTTCACGGGCAAACGCTCGCGAATCATCGCGGGTTTTGCACGGCTCTTCGAGAAACGCGagg     <  1:148045/151‑3 (MQ=255)                                                                                                                                   gATAACTACCGCGCGCACGCCCTCTTCAGCCACAAAGGCAAAATCCGGCTCGCGCAGGCTTTCATCCCAGGCAATGGCAATGCCGGTTTCACGGGCAAACGCTCGCGAATCATCGCGGGTTTTGCACGGCTCTTCGAGAAACGCGATGCgg  >  2:205631/1‑151 (MQ=255)                                                                                                                                   gATAACTACCGCGCGCACGCCCTCTTCAGCCACAAAGGCAAAATCCGGCTCGCGCAGGCTTTCATCCCAGGCAATGGCAATGCCGGTTTCACGGGCAAACGCTCGCGAATCATCGCGGGTTTTGCACGGCTCTTCGAGAAACGCGATGCgg  >  2:381280/1‑151 (MQ=255)                                                                                                                                                       |                                                                                                                                   CAATCCGCGCCAGTTGCGTTAAGCCTAAGCTCGATTCAATGGAAGAACTGATCACCGCCGTCAGCCCCAGCGCGTGCGCCGCCTGTACCTGCTCGCGTACTTTTTCCAGACTGCCCGTGAGCGTGGGTTTGATAACTACCGCGCGCACGCCCTCTTCAGCCACAAAGGCAAAATCCGGCTCGCGCAGGCTTTCATCCCAGGCAATGGCAATGCCGGTTTCACGGGCAAACGCTCGCGAATCATCGCGGGTTTTGCACGGCTCTTCGAGAAACGCGATGCGG  >  NC_000913/2375131‑2375411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.