Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,966,174 IS1 (–) +9 bp intergenic (+84/‑235) trxA → / → rho thioredoxin 1/transcription termination factor

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3583428 =NA (NA)30 (1.010) 23/298 0.2 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 3966174 = 0 (0.000)intergenic (+84/‑243) trxA/rho thioredoxin 1/transcription termination factor
* ? NC_000913 = 3584195NA (NA)49 (1.640) 34/298 0.0 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 3966182 0 (0.000)intergenic (+92/‑235) trxA/rho thioredoxin 1/transcription termination factor

CAACCAAAGTGGGTGCACTGTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGACATG  >  NC_000913/3966026‑3966323
                                                                                                                                                    |                                                                                                                                                     
cAACCAAAGTGGGTGCACTGTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAAc                                                                                                                                                     <  1:453750/151‑1 (MQ=255)
cAACCAAAGTGGGTGCACTGTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAAc                                                                                                                                                     <  2:108002/151‑1 (MQ=255)
cAACCAAAGTGGGTGCACTGTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAAc                                                                                                                                                     <  2:425355/151‑1 (MQ=255)
 agatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAACa                                                                                                                                                    >  1:97833‑M2/148‑151 (MQ=255)
 agatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAACa                                                                                                                                                    >  1:178411‑M2/148‑151 (MQ=255)
  aCCAAAGTGGGTGCACTGTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACAt                                                                                                                                                   >  2:149923/1‑151 (MQ=255)
  aCCAAAGTGGGTGCACTGTCTAAAGGTCAGTTGAAAGAGCTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACAt                                                                                                                                                   >  1:197307/1‑151 (MQ=255)
   atagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccagcatacactaaatcagtaagttggcagcatcaccAACAt                                                                                                                                                   <  1:332834‑M2/5‑1 (MQ=255)
     aaaGTGGGTGCACTGTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATAcc                                                                                                                                                <  1:400341/151‑1 (MQ=255)
       cgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAACATAcc                                                                                                                                                <  2:151848‑M2/8‑1 (MQ=255)
        gTGGGTGCACTGTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTgg                                                                                                                                             <  2:178617‑M2/151‑3 (MQ=255)
            gTGCACTGTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaa                                                                                                                                          >  1:272835‑M2/1‑145 (MQ=255)
            atgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAACATACCttatta                                                                                                                                          <  2:97833‑M2/14‑1 (MQ=255)
                   gTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactcca                                                                                                                                  <  2:63845‑M2/151‑14 (MQ=255)
                   gTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactcca                                                                                                                                  <  1:120804‑M2/151‑14 (MQ=255)
                   gTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactcca                                                                                                                                  <  2:53590‑M2/151‑14 (MQ=255)
                   gTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactcca                                                                                                                                  <  2:464393‑M2/151‑14 (MQ=255)
                   gTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactcca                                                                                                                                  <  1:309316‑M2/151‑14 (MQ=255)
                   gTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactcca                                                                                                                                  <  2:332843‑M2/151‑14 (MQ=255)
                   gTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactcca                                                                                                                                  <  1:233595‑M2/151‑14 (MQ=255)
                       aaaGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaactt                                                                                                                              >  1:410477‑M2/1‑134 (MQ=255)
                            tCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattg                                                                                                                          >  2:193720‑M2/1‑129 (MQ=255)
                               gTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatag                                                                                                                      <  1:263212‑M2/151‑26 (MQ=255)
                               gTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatag                                                                                                                      <  2:35854‑M2/151‑26 (MQ=255)
                               gTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatag                                                                                                                      <  1:264953‑M2/151‑26 (MQ=255)
                                ttGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgat                                                                                                                        >  2:172583‑M2/1‑125 (MQ=255)
                                ttGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgat                                                                                                                        >  1:119196‑M2/1‑125 (MQ=255)
                                ttGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCATCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgat                                                                                                                        >  1:47195‑M2/1‑125 (MQ=255)
                                    acgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACg                                                                                                                 >  2:297509‑M2/113‑151 (MQ=255)
                                        gTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatg                                                                                                             <  1:412190‑M2/151‑35 (MQ=255)
                                         ttCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgt                                                                                                            >  1:434514‑M2/1‑116 (MQ=255)
                                             cccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGtt                                                                                                        <  2:380514‑M2/48‑1 (MQ=255)
                                                gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTa                                                                                                     >  2:226452‑M2/101‑151 (MQ=255)
                                                     aaCCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcc                                                                                                >  1:256463‑M2/1‑104 (MQ=255)
                                                            cGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgac                                                                                         >  1:262753‑M2/1‑97 (MQ=255)
                                                            cGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga                                                                                          >  1:421320‑M2/1‑97 (MQ=255)
                                                                    aaTTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat                                                                                 >  2:423614‑M2/1‑89 (MQ=255)
                                                                    aaTTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                                                                  >  2:309322‑M2/1‑89 (MQ=255)
                                                                      tttCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc                                                                               >  1:100967‑M2/1‑87 (MQ=255)
                                                                         ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGa                                                                               <  2:211449‑M2/73‑1 (MQ=255)
                                                                         cATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc                                                                            >  2:412201‑M2/1‑84 (MQ=255)
                                                                              tCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                                                                       >  2:470939‑M2/1‑79 (MQ=255)
                                                                               gaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTgg                                                                        >  1:66814‑M2/70‑149 (MQ=255)
                                                                                gggTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccg                                                                     <  1:77172‑M2/151‑75 (MQ=255)
                                                                                   tGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatt                                                                  >  1:95848‑M2/1‑74 (MQ=255)
                                                                                         ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCaa                                                            >  1:211442‑M2/60‑151 (MQ=255)
                                                                                           cGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                                                          >  2:418854‑M2/1‑66 (MQ=255)
                                                                                           actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATc                                                          <  2:145416‑M2/94‑1 (MQ=255)
                                                                                           actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATc                                                          <  2:239412‑M2/94‑1 (MQ=255)
                                                                                                aaaaCTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgacgccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacag                                                     >  1:359918‑M2/1‑61 (MQ=255)
                                                                                                       caaaaacaccatcatacactaaatcagtaagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGtt                                              >  2:369986‑M2/46‑151 (MQ=255)
                                                                                                             caccatcatacactaaatcagtaagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGtt                                        >  1:156540‑M2/40‑151 (MQ=255)
                                                                                                               gCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccag                                      <  1:73306‑M2/151‑106 (MQ=255)
                                                                                                               ccatcatacactaaatcagtaagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGtt                                        >  1:445000‑M2/38‑149 (MQ=255)
                                                                                                                cGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagc                                     >  2:292034‑M2/1‑45 (MQ=255)
                                                                                                                 atcatacactaaatcagtaagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAg                                                                                >  1:16068‑M2/36‑107 (MQ=255)
                                                                                                                 atcatacactaaatcagtaagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAg                                                                                <  2:16068‑M2/72‑1 (MQ=255)
                                                                                                                 atcatacactaaatcagtaagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTg                                     >  1:10955‑M2/36‑150 (MQ=255)
                                                                                                                    aGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtg                                 <  2:85970‑M2/151‑111 (MQ=255)
                                                                                                                       cactaaatcagtaagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTAct                               >  2:302798‑M2/30‑150 (MQ=255)
                                                                                                                        actaaatcagtaagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTActct                             <  1:278922‑M2/123‑1 (MQ=255)
                                                                                                                         tGCTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgctttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccagg                            <  2:157585‑M2/151‑116 (MQ=255)
                                                                                                                           cTAACTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtg                          >  1:348597‑M2/1‑34 (MQ=255)
                                                                                                                             atcagtaagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACtctc                            >  2:248189‑M2/24‑147 (MQ=255)
                                                                                                                             aaCTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtg                          <  1:415741‑M2/149‑118 (MQ=255)
                                                                                                                              aCTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtg                          <  1:133235‑M2/148‑118 (MQ=255)
                                                                                                                              aCTTAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtg                          <  2:120135‑M2/148‑118 (MQ=255)
                                                                                                                                 tAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct                    >  1:296182‑M2/1‑28 (MQ=255)
                                                                                                                                 tAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct                    >  1:147404‑M2/1‑28 (MQ=255)
                                                                                                                                 tAGTGTTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgc                      <  1:17985‑M2/149‑122 (MQ=255)
                                                                                                                                  taagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAGGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGa                      <  1:300019‑M2/130‑1 (MQ=255)
                                                                                                                                  taagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGa                      <  2:143769‑M2/130‑1 (MQ=255)
                                                                                                                                  taagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGa                      <  1:137211‑M2/130‑1 (MQ=255)
                                                                                                                                  taagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGa                      <  2:285099‑M2/130‑1 (MQ=255)
                                                                                                                                  taagttggcagcatcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGa                      <  1:369976‑M2/130‑1 (MQ=255)
                                                                                                                                   gtgtTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctca                  <  2:175268‑M2/151‑126 (MQ=255)
                                                                                                                                   gtgtTGACTTCGTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctca                  <  2:7291‑M2/151‑126 (MQ=255)
                                                                                                                                              gTATTAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggtta       <  1:94894‑M2/151‑137 (MQ=255)
                                                                                                                                               tcaccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGa      >  2:285359‑M2/6‑151 (MQ=255)
                                                                                                                                                caccAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGa      >  2:177532‑M2/5‑150 (MQ=255)
                                                                                                                                                 ttAAACATACCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgc    >  1:94747‑M2/1‑12 (MQ=255)
                                                                                                                                                   cAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGACATg  >  1:21162‑M2/2‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CAACCAAAGTGGGTGCACTGTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAAGGGAATTTCATGTTCGGGTGCCCCGTCGCTAAAAACTGGACGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAACGCTTCCCGTTTTATCTTAAATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGACCAGGCAGCGAAAAGACATG  >  NC_000913/3966026‑3966323

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.