| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4370205 = | 13 (0.440) | 4 (0.140) | 4/280 | 2.3 | 18.1% | coding (208/1257 nt) | yjeH | putative transporter |
| ? | NC_000913 | 4370316 = | 24 (0.860) | coding (97/1257 nt) | yjeH | putative transporter | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
GAACCAAACGCCATACCGACGAAGTGCGCGACGCCGCCTGCGCTGGGATAGTGGCGACCCAGAATCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATGCCCTGGGCCAGCCCCAGTTCTTGTTTGAGTCCACTCATGGGTTGATGTCCGATTGCGCCCAAATTTTGGGCAACTGCGTA > NC_000913/4370168‑4370454 | ttattaggcactggcgtgtttgccgttcctgcgttagCTGCGCTGGGATAGTGGCGACCCAGAATCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTa < 1:145285‑M1/114‑1 (MQ=255) aaCCAAACGCCATACCGACGAAGTGCGCGACGCCGCCTGCGCTGGGATAGTGGCGACCCAGAATCGCAAACACAATCGCAATCGGGGACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTa < 2:159895/150‑1 (MQ=255) taggcactggcgtgtttgccgttcctgcgttagctgcgctggtagcgggcaataacagcctgtgggcgtggcccgttttgattatcttagtgttcccgattgcgattgtgtttgcgattctgggtcgccactatcccagcgcagCTAACGc < 2:159025‑M2/7‑1 (MQ=255) aaaCGCCATACCGACGAAGTGCGCGACGCCGCCTGCGCTGGGATAGTGGCGACCCAGAATCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCa < 2:385636/151‑1 (MQ=255) cGCCATACCGACGAAGTGCGCGACGCCGCCTGCGCTGGGATAGTGGCGACCCAGAATCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGa > 2:402174/1‑151 (MQ=255) ggcgtgtttgccgttcctgcgttagCTGCGCTGGGATAGTGGCGACCCAGAATCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACgg < 1:116184‑M1/126‑1 (MQ=255) ccgttcctgcgttagctgcgctggtagcgggcaataacagcctgtgggcgtggcccgttttgattatcttagtgttcccgattgcgattgtgtttgcgattctgggtcgccactatcccagcgcagCTAACGCAGGAACGGCAAACACGcc < 1:116184‑M2/25‑1 (MQ=255) gTGCGCGACGCCGCCTGCGCTGGGATAGTGGCGACCCAGAATCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCa > 1:142890/1‑151 (MQ=255) gcgttagCTGCGCTGGGATAGTGGCGACCCAGAATCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCta < 2:159025‑M1/144‑1 (MQ=255) ccgccTGCGCTGGGATAGTGGCGACCCAGAATCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGAGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCtaat < 1:449748/150‑1 (MQ=255) tagctgcgctggtagcgggcaataacagcctgtgggcgtggcccgttttgattatcttagtgttcccgattgcgattgtgtttgcgattctgggtcgccactatcccagcgcagCTAACGCAGGAACGGCAAACACGCCAGTGCCtaataa < 1:145285‑M2/37‑1 (MQ=255) cgccTGCGCTGGGATAGTGGCGACCCAGAATCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCtaataa < 2:41741/151‑1 (MQ=255) GCGCTGGGATAGTGGCGACCCAGAATCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACg < 2:357234‑M1/151‑1 (MQ=255) gtagcgggaaataacagcctgtgggggtggcccgttttgattatcttagtgtccccgattgcaattgtgtttgcgattctgggtcgccactatcccagcgcagCTAACGCAGGACCGGCAAACACGCCAGTGCCTAATAATGACGTCGAt < 1:3246‑M2/47‑1 (MQ=255) aTAGTGGCGACCCAGAATCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGc < 2:76484/151‑1 (MQ=255) aTAGTGGCGACCCAGAATCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGc < 2:366869/151‑1 (MQ=255) aCCCAGAATCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATg > 2:73506/1‑151 (MQ=255) aCCCAGAATCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATg > 2:338908/1‑151 (MQ=255) cccAGAATCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACACCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATg > 1:145368/1‑150 (MQ=255) aaTCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATGccc < 1:46477/148‑1 (MQ=255) tCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATGCCCTGGGc < 2:53813/151‑1 (MQ=255) cGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATGCCCTGGGcc < 2:137091/151‑1 (MQ=255) cacaATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATGCCCTGGGCCAGccc > 1:461386/1‑150 (MQ=255) atcgcaatcgGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATGCCCTGGGCCAGCCCCAGtt > 2:240010/1‑151 (MQ=255) cacTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATGCCCTGGGCCAGCCCCAGTTCTTGTTTGAGTCCa > 2:172243/1‑151 (MQ=255) cacTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATGCCCTGGGCCAGCCCCAGTTCTTGTTTGAGTCCa > 1:241811/1‑151 (MQ=255) cacTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATGCCCTGGGCCAGCCCCAGTTCTTGTTTGAGTCCa > 2:377988/1‑151 (MQ=255) cacTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATGCCCTGGGCCAGCCCCAGTTCTTGTTTGAGTCCa > 2:42440/1‑151 (MQ=255) aaTCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATGCCCTGGGCCAGCCCCAGTTCTTGTTTGAGTCCACTCATGGGt < 1:171121/151‑1 (MQ=255) aCGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATGCCCTGGGCCAGCCCCAGTTCTTGTTTGAGTCCACTCATGGGTTGATGTc < 1:166518/151‑1 (MQ=255) cccACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATGCCCTGGGCCAGCCCCAGTTCTTGTTTGAGTCCACTCATGGGTTGATGTCCGATTgcgc > 1:21479/1‑150 (MQ=255) cTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATGCCCTGGGCCAGCCCCAGTTCTTGTTTGAGTCCACTCATGGGTTGATGTCCGATTGCGCCCAAAtttt > 2:158755/1‑151 (MQ=255) ctataagagcAGCTAATACACGAACGGCTAACCTGCGAGAGCCTAATTGTGAAGTCGATGGAAGAACAATGCGCTGGGCCGGCCCACAATCTTGCGTGAGTCTACGCATGGGATGATGTCAGAATGCGCCCAAATTTTGGGCAACTGCGTa > 1:116978/9‑151 (MQ=255) | GAACCAAACGCCATACCGACGAAGTGCGCGACGCCGCCTGCGCTGGGATAGTGGCGACCCAGAATCGCAAACACAATCGCAATCGGGAACACTAAGATAATCAAAACGGGCCACGCCCACAGGCTGTTATTGCCCGCTACCAGCGCAGCTAACGCAGGAACGGCAAACACGCCAGTGCCTAATAATGACGTCGATAGCAGGCCAATGCCCTGGGCCAGCCCCAGTTCTTGTTTGAGTCCACTCATGGGTTGATGTCCGATTGCGCCCAAATTTTGGGCAACTGCGTA > NC_000913/4370168‑4370454 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |