| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,673,670 | IS1 (–) +9 bp | intergenic (‑169/‑235) | mdtJ ← / → tqsA | multidrug efflux system transporter/pheromone AI‑2 transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 257908 = | NA (NA) | 31 (0.670) | 27/296 | 0.4 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 1673678 | 0 (0.000) | intergenic (‑177/‑235) | mdtJ/tqsA | multidrug efflux system transporter/pheromone AI‑2 transporter | |||||
| * | ? | NC_000913 | 1673670 = | 0 (0.000) | 42 (0.910) | 32/296 | 0.2 | 100% | intergenic (‑169/‑243) | mdtJ/tqsA | multidrug efflux system transporter/pheromone AI‑2 transporter |
| ? | NC_000913 | = 1979270 | NA (NA) | noncoding (1/768 nt) | IS1 | repeat region | |||||
TTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCACTT > NC_000913/1673528‑1673826 | ttAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATg < 2:177582/151‑1 (MQ=255) cgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATg > 2:438505‑M1/142‑150 (MQ=255) cgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGt > 1:707686‑M1/142‑151 (MQ=255) cgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGt > 1:460322‑M1/142‑151 (MQ=255) aaTTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGgg > 1:54533‑M2/1‑149 (MQ=255) ctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaataagtaagttggcagcatcaccGGGTAAATGTAg < 1:709055‑M1/12‑1 (MQ=255) gtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAAt < 1:242961‑M1/17‑1 (MQ=255) cTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGggtaatgac > 1:696262‑M2/1‑141 (MQ=255) cAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGggtaatgactccaactt < 2:292727‑M2/151‑18 (MQ=255) ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccgtcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAAc > 2:243738‑M1/123‑151 (MQ=255) gtaaagtGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttt < 1:474271‑M2/151‑31 (MQ=255) gcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCata < 2:352956‑M1/41‑1 (MQ=255) accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCataat > 1:292725‑M1/109‑151 (MQ=255) gTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttc > 2:60276‑M2/1‑113 (MQ=255) ccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTa < 1:460524‑M1/47‑1 (MQ=255) cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACaa > 2:43120‑M1/102‑151 (MQ=255) cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACaa > 2:369481‑M1/102‑151 (MQ=255) cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACaa > 2:453523‑M1/102‑151 (MQ=255) cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACaa > 2:138428‑M1/102‑151 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAAt < 2:128380‑M1/51‑1 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAAt < 2:278634‑M1/51‑1 (MQ=255) gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAAt < 1:178994‑M1/51‑1 (MQ=255) aGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagata < 1:321693‑M2/151‑43 (MQ=255) tagctgaacaggagtgacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATcc > 1:600755‑M1/96‑151 (MQ=255) cgcgCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcc > 2:105352‑M2/1‑104 (MQ=255) tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAg > 2:127287‑M1/92‑151 (MQ=255) caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGtt < 1:194360‑M1/64‑1 (MQ=255) cgcAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgac > 1:306314‑M2/1‑95 (MQ=255) gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAgtgt > 1:336653‑M1/85‑147 (MQ=255) aGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt < 1:386260‑M2/150‑60 (MQ=255) ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCtt > 2:288587‑M1/82‑149 (MQ=255) gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTtct < 2:210712‑M1/70‑1 (MQ=255) ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTc > 1:321940‑M1/76‑149 (MQ=255) gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATcg < 2:525760‑M1/78‑1 (MQ=255) gACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattt < 2:600767‑M2/151‑79 (MQ=255) aCTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattt > 1:421696‑M2/1‑72 (MQ=255) aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAAt > 1:634342‑M1/63‑151 (MQ=255) aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGATAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAAt > 1:655347‑M1/63‑151 (MQ=255) aagccactggagcacctcaaaaacaccagcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAAt > 1:34546‑M1/63‑151 (MQ=255) ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGt < 2:366727‑M1/92‑1 (MQ=255) ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTc < 1:514102‑M1/93‑1 (MQ=255) cgcCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcga < 2:87133‑M2/151‑94 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGtt < 1:666658‑M1/103‑1 (MQ=255) tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTg > 1:655893‑M1/47‑137 (MQ=255) tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTg < 2:655911‑M1/91‑1 (MQ=255) gTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttc < 1:369479‑M2/150‑98 (MQ=255) tgctgcTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttc > 2:187066‑M2/1‑52 (MQ=255) aaacaccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAacac > 1:237999‑M1/43‑151 (MQ=255) gctCACCTACGAGCAAGTTAGTGGATGAGGTACGAAGATGGGTAAATGggaactgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaaccacagcgacttccgtcc < 1:242394‑M2/150‑103 (MQ=255) gctCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcc < 2:173446‑M2/150‑103 (MQ=255) ccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGc < 2:156591‑M1/111‑1 (MQ=255) ccatcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGc < 1:184061‑M1/111‑1 (MQ=255) atcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATATTTGTCCTCGGTAGTTGAACACGCCTGAt < 2:509147‑M1/116‑1 (MQ=255) atcatacactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGAt < 1:312197‑M1/116‑1 (MQ=255) cGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgc < 2:635617‑M2/150‑112 (MQ=255) cactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTAt < 2:616813‑M1/122‑1 (MQ=255) cactaaatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTAt > 1:234195‑M1/30‑151 (MQ=255) gCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGg > 1:254333‑M2/1‑36 (MQ=255) gCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGg < 2:254335‑M2/37‑2 (MQ=255) aatcagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAg > 2:279404‑M1/25‑151 (MQ=255) aGATAGTGGATGAGGTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtg < 1:92611‑M2/150‑118 (MQ=255) cagtaagttggcagcatcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCtt < 2:207469‑M1/130‑1 (MQ=255) tGGATGAGGTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc > 2:113946‑M2/1‑27 (MQ=255) tGAGGTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagat > 2:364166‑M2/1‑23 (MQ=255) gTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag < 1:574101‑M2/151‑133 (MQ=255) gTACGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag < 2:539996‑M2/151‑133 (MQ=255) aCGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggt > 2:557038‑M2/1‑17 (MQ=255) aCGAAGATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggt > 2:628234‑M2/1‑17 (MQ=255) tcaccGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCaaaa < 1:566410‑M1/146‑1 (MQ=255) gATGGGTAAATGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatg < 2:434922‑M2/150‑139 (MQ=255) atgggtaaatgggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgc > 1:89002‑M2/1‑11 (MQ=255) gggtaaatgggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccg < 1:631785‑M2/150‑142 (MQ=255) gtaaatgggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgct < 2:46591‑M2/150‑144 (MQ=255) atgggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaatt < 1:336335‑M2/151‑149 (MQ=255) | TTAATTTTCGCTTAATTCAGCGAAACCAAAGTAAAGTGGTCAAGCCCCGCGCATAGCGCAAGCTTTGGCAGAAGAAAGGACTAAAGCGCGTTGCGCCAGTGCTGCTCACCTACGAGCAAGATAGTGGATGAGGTACGAAGATGGGTAAATGTAGAAAATAACGTCCTGAACAAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGCGGATGATAATTGTCCTCGGTAGTTGAACACGCCTGATTTGTATCATAGCTTAAGAATTAACTCAAAATATTTTCACTT > NC_000913/1673528‑1673826 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |