BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000731	4294 =	100 (0.930)	7 (0.010)	3/264	12.4	1.4%	intergenic (+259/‑206)	USA300HOU_pUSA300HOUMR0006/cadR	hypothetical protein/cadmium binding protein
*	?	NC_012417	2073 =	904 (0.940)	7 (0.010)	3/264	12.4	1.4%	intergenic (+306/+20)	USA300HOU_RS14895/USA300HOU_RS14900	hypothetical protein/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 103 total aligned reads displayed.

TTGAAGATTTTTCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAG  >  CP000731/4155‑4434

ttGAAGATTTTTCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAAtt                                                                                                                                             >  1:302331/1‑141 (MQ=255)

  gAAGATTTTTCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTa                                                                                                                                           <  2:43937/141‑1 (MQ=255)

   aaGATTTTTCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTAt                                                                                                                                          >  2:265601/1‑141 (MQ=255)

    aGATTTTTCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTAtt                                                                                                                                         <  1:182637/141‑1 (MQ=255)

    aGATTTTTCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTAtt                                                                                                                                         >  1:130608/1‑141 (MQ=255)

       tttttCGTAGATATGATTTGCTAATCAACCTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTGCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGAt                                                                                                                                      <  1:88511/141‑1 (MQ=255)

       tttttCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGAt                                                                                                                                      >  1:83321/1‑141 (MQ=255)

       tttttCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGAt                                                                                                                                      <  1:260009/141‑1 (MQ=255)

          ttCGTATATAAAATTAACTAAAAAACTTCCTAAAACTAAATAAAAAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAATTTCTCCATGTCTACGCATATACACGCAAAAAAAAAAAAAAAATTTATTGATGtt                                                                                                                                   <  2:266679/141‑1 (MQ=255)

          ttCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGtt                                                                                                                                   <  1:341052/141‑1 (MQ=255)

          ttCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGtt                                                                                                                                   <  1:272865/141‑1 (MQ=255)

           tCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTg                                                                                                                                  <  1:295024/141‑1 (MQ=255)

             gTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTgag                                                                                                                                <  1:156788/141‑1 (MQ=255)

             gTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTgag                                                                                                                                <  1:111308/141‑1 (MQ=255)

             gTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACAAGCATTTATGCCGAAAAAATTTATTGATGTTgag                                                                                                                                <  1:209630/141‑1 (MQ=255)

              tAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTgaga                                                                                                                               <  1:57425/141‑1 (MQ=255)

               aGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGagaa                                                                                                                              <  2:46351/141‑1 (MQ=255)

                   ataATTTGCTAATAAACTTCCTAAAACTGAATAAAGAGAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGAAAAAAAAAAAAAAAAGTTTATTGATGTTGAGAAGAAc                                                                                                                          <  2:186535/141‑1 (MQ=255)

                     aaTTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAGCTCATGTAATGACTCCATGATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCAATAAAACAGAAAAAATTTATTGATGTTGAGAAGAAccc                                                                                                                        <  2:227930/141‑1 (MQ=255)

                     aaTTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAAccc                                                                                                                        <  2:54255/141‑1 (MQ=255)

                     aaTTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAAccc                                                                                                                        <  2:239181/141‑1 (MQ=255)

                     aaTTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAAccc                                                                                                                        >  2:185738/1‑141 (MQ=255)

                      aTTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCt                                                                                                                       >  1:128391/1‑141 (MQ=255)

                      aTTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCt                                                                                                                       <  2:347155/141‑1 (MQ=255)

                           cTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACt                                                                                                                  >  2:352826/1‑141 (MQ=255)

                             aataaACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTaa                                                                                                                <  2:292307/141‑1 (MQ=255)

                                aaaCTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTAGGACGAAAAAATTTATTGCTGTTTAGAAGAACCCTTAACTAAACt                                                                                                             >  1:218467/1‑141 (MQ=255)

                                  aCTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTg                                                                                                           >  2:34641/1‑141 (MQ=255)

                                  aCTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCATTAACTAAAATTg                                                                                                           >  2:3817/1‑141 (MQ=255)

                                   cTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGc                                                                                                          >  2:154374/1‑141 (MQ=255)

                                    ttCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCa                                                                                                         >  1:297843/1‑141 (MQ=255)

                                     tCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAg                                                                                                        <  2:162348/141‑1 (MQ=255)

                                      ccTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGa                                                                                                       <  1:359341/141‑1 (MQ=255)

                                      ccTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGa                                                                                                       <  2:264437/141‑1 (MQ=255)

                                       cTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATGATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGAc                                                                                                      <  1:120534/141‑1 (MQ=255)

                                       cTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGAc                                                                                                      >  1:150443/1‑141 (MQ=255)

                                       cTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGAc                                                                                                      >  1:21362/1‑141 (MQ=255)

                                       cTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGAc                                                                                                      >  1:88684/1‑141 (MQ=255)

                                       cTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGAc                                                                                                      >  1:135597/1‑141 (MQ=255)

                                       cTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCACAGACCCGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGAc                                                                                                      <  1:202650/141‑1 (MQ=255)

                                        tAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACg                                                                                                     >  1:154562/1‑141 (MQ=255)

                                        tAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACg                                                                                                     <  1:307115/141‑1 (MQ=255)

                                        tAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACAAGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACg                                                                                                     >  1:302320/1‑141 (MQ=255)

                                         aaaaCTGAATAAAGAAAAATAGATAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTAATGTTGAAAAGAAACCTTAACTAAACTTGCAAACGa                                                                                                    >  2:224802/1‑141 (MQ=38)

                                          aaaCTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTTAGAAGAACCCTTAACTAAACTTGCAGACGaa                                                                                                   <  1:156759/141‑1 (MQ=255)

                                           aaCTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAAt                                                                                                  <  2:3732/141‑1 (MQ=255)

                                            aCTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATg                                                                                                 >  1:350799/1‑141 (MQ=255)

                                             ccgAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGGAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGt                                                                                                <  1:93393/139‑1 (MQ=255)

                                             cTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGt                                                                                                >  2:404173/1‑141 (MQ=255)

                                                   aaaGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCAt                                                                                          >  2:223242/1‑141 (MQ=255)

                                                      gAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGc                                                                                       <  2:172299/141‑1 (MQ=255)

                                                       aaaaaTAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCg                                                                                      <  1:22666/141‑1 (MQ=255)

                                                         aaaTAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTg                                                                                    <  1:347355/141‑1 (MQ=255)

                                                         aaaTAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTg                                                                                    <  1:138999/141‑1 (MQ=255)

                                                           aTAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGGATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAg                                                                                  >  1:205219/1‑141 (MQ=255)

                                                           aTAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAg                                                                                  >  2:284695/1‑141 (MQ=255)

                                                           aTAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAg                                                                                  >  1:13274/1‑141 (MQ=255)

                                                             aGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCt                                                                                >  1:297934/1‑141 (MQ=255)

                                                             aGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCt                                                                                >  1:297925/1‑141 (MQ=255)

                                                             aGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCt                                                                                <  1:352644/141‑1 (MQ=255)

                                                                   aCTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAg                                                                          <  1:47633/141‑1 (MQ=255)

                                                                           aaTCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCAt                                                                  >  2:269863/1‑141 (MQ=255)

                                                                              cACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGCAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCg                                                               >  1:211223/1‑141 (MQ=255)

                                                                              cACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCg                                                               >  1:274618/1‑141 (MQ=255)

                                                                               aCTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGa                                                              <  2:328621/141‑1 (MQ=255)

                                                                                cTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGAc                                                             >  2:344363/1‑141 (MQ=255)

                                                                                cTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGAc                                                             <  1:125216/141‑1 (MQ=255)

                                                                                cTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGAc                                                             <  1:141545/141‑1 (MQ=255)

                                                                                cTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGAc                                                             <  2:140286/141‑1 (MQ=255)

                                                                                   cATAATTCTGAAGTGTCTCCATGTCTCCGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTCGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAg                                                          <  2:262241/141‑1 (MQ=255)

                                                                                   cATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAg                                                          <  2:199394/141‑1 (MQ=255)

                                                                                   cATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAg                                                          >  1:196971/1‑141 (MQ=255)

                                                                                    aTAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGAc                                                             >  1:65114/1‑137 (MQ=255)

                                                                                    aTAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGAc                                                             <  2:65114/137‑1 (MQ=255)

                                                                                    aTAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGCCATAGCGTGAGCTATTAAGCCGACCTTTCGACAAGt                                                         >  1:303560/1‑141 (MQ=255)

                                                                                       aTTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGtttt                                                      <  1:176772/141‑1 (MQ=255)

                                                                                       aTTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGtttt                                                      <  2:349086/141‑1 (MQ=255)

                                                                                         tCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTgg                                                    <  2:114859/141‑1 (MQ=255)

                                                                                          cTGAAGTGTCTCCATGTCTACGCATAGACACTCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTggg                                                   >  2:247762/1‑141 (MQ=255)

                                                                                          cTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTggg                                                   >  2:212942/1‑141 (MQ=255)

                                                                                          cTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTggg                                                   >  2:19511/1‑141 (MQ=255)

                                                                                          cTGAAGTGTCTCCATGTCCACGCATAGACACTCATCTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTggg                                                   >  2:388181/1‑141 (MQ=255)

                                                                                                 gtCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTa                                            >  2:350891/1‑141 (MQ=255)

                                                                                                   ctcCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAg                                          >  2:166092/1‑141 (MQ=255)

                                                                                                     ccATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAggg                                        <  2:65925/141‑1 (MQ=255)

                                                                                                       aTGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGtt                                      <  1:239339/141‑1 (MQ=255)

                                                                                                        tGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTc                                     >  1:111292/1‑141 (MQ=255)

                                                                                                         gTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTcc                                    <  1:154374/141‑1 (MQ=255)

                                                                                                                        cGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAGCTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCaa                     >  1:361637/1‑141 (MQ=17)

                                                                                                                          cATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATa                   >  1:207181/1‑141 (MQ=11)

                                                                                                                             ttATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAg                <  2:327767/141‑1 (MQ=11)

                                                                                                                             ttATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAg                <  1:223242/141‑1 (MQ=11)

                                                                                                                              tATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCAGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGc               >  1:128054/1‑141 (MQ=14)

                                                                                                                              tATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTAGGCATAGAGTGCGCTCTTCAGCCGACTATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGc               >  1:201803/1‑141 (MQ=11)

                                                                                                                                    gAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTgg         <  2:214117/141‑1 (MQ=32)

                                                                                                                                     aaaaaaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGa        <  1:12926/141‑1 (MQ=31)

                                                                                                                                      aaaaaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGaa       <  2:160143/141‑1 (MQ=11)

                                                                                                                                      aaaaaTTTATTGAGGTGGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGaa       <  2:137144/141‑1 (MQ=11)

                                                                                                                                           tttATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAg  >  2:105903/1‑141 (MQ=11)

                                                                                                                                           tttATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAg  >  2:123765/1‑141 (MQ=11)

TTGAAGATTTTTCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAG  >  CP000731/4155‑4434

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.