| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | = 2372 | 94 (0.990) | 7 (0.020) | 3/264 | 12.1 | 1.5% | intergenic (+152/+16) | USA300HOU_pUSA300HOUMR0003/USA300HOU_pUSA300HOUMR0004 | hypothetical protein/hypothetical protein |
| ? | NC_012417 | = 1946 | 847 (1.010) | intergenic (+179/+147) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000731/2225‑2372‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaataaaTTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTGA < NC_012417/1946‑1807 CATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGT > 1:220752/1‑141CATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTAGGATTGTGAAGGGTTCCGAGGCTCAACGT < 2:61405/141‑1 GTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAAT < 2:160116/141‑1 GTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAAT > 2:232328/1‑141 TATTTATGCCGAAAATATTTATTGATGTTGAGACGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGACCTATTAAGCCTACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATA < 2:107256/141‑1 TATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATA < 1:332196/141‑1 ATTTATGCCGAAAGAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGCATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCAGAGGCTCCACGTCAATAA < 2:180650/141‑1 ATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAA > 2:275592/1‑141 TGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAATTTTCTCGGCATAAATGCGTCGTCTA > 1:136846/1‑141 ACCCTTAGCTAAACTTGCAGACGAAGGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGATAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTAT < 2:169688/141‑1 TAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCt > 2:61651/1‑140 TAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCA > 1:68402/1‑141 TAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGAT > 2:118705/1‑141 AAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATA > 1:338484/1‑141 AACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCAACAAGTTTTGGGATTGTTAAGGGTCCCGAGGCTCAACGTCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGA < 2:226106/141‑1 aaaaataAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTCTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAG‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAA < 2:260912/134‑1 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAATCAT‑CATATCCATACTATATCTAAAAGTAAGCAACAACACCAATAGGAATAAAAAAAC > 1:241695/1‑141 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAACAGTAAGCAACAACACCAATAGGAATAAAAAAAC > 1:251892/1‑141 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAAa > 1:88593/1‑140 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAAC < 1:235525/141‑1 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAAC > 1:341771/1‑141 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAAC > 1:195090/1‑141 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAAC > 2:305789/1‑141 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAACCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAAC > 1:296125/1‑141 aAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACA < 2:173302/140‑1 CAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATTTATATCTGAATCATCTTTTGCTTCCATCTCGTCAAAAGCAT‑CATCTTTATATAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACA > 2:344920/1‑141 CAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATTATCATATTTTTCTTCCATCTCGTCAAAATCAT‑CATCTTTATAGCAAAACAAAACGTACCCAACAACACCAACACTAATAAAAAActc > 2:155615/1‑138 CAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTTAATCGCGACAAAAGCAT‑CCTCTTTTTTTGAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACA > 1:49328/1‑141 CAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAATCAT‑CATCTTTATATAAAAACACAATGTAAGCACCAACACCAATAGAACTAAAAAAACc > 2:316338/1‑140 CAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACTCCAATAGGAATAAAAAAACA < 1:15153/141‑1 CAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCACTATTAATAAAAAAACA > 2:303358/1‑141 CAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACA < 1:312030/141‑1 CAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACA > 2:287990/1‑141 CAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGACAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACA < 2:296997/141‑1 CAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATATTCATGATAATCATATTTTTCTTCCATCTCGTCAAACCCAT‑CATCTTTATAGAAAACCAAAATGTAAGCAACAACACCAATACCAATAAAATAACA > 2:101365/1‑141 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAACCCAACAATAAGAGATATCACTAACAGAAATAAAAAAACAG > 2:212887/1‑141 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAa > 1:240617/1‑140 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAG > 1:53867/1‑141 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAG < 1:340546/141‑1 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAAGAATAAAAAAAata > 2:195954/1‑138 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTGTATTATCATCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAG < 1:456/141‑1 AATAAATTTTCTCGATATAAATGCGTAGTCTATTTTTTATTATATGCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAG < 2:56071/141‑1 AATAAATTTTCGCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACTCCAATAGGAATAAAAAAACAG < 1:14778/141‑1 ATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACCAAAAGTAAGCCCCAACACCAATAGGAATTACAAAACAtt > 1:19368/1‑139 ATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGT > 1:87736/1‑141 ATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGT > 1:90900/1‑141 ATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGT > 1:243749/1‑141 ATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGT > 1:234494/1‑141 TAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTG < 1:288054/141‑1 TAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTG < 1:315525/141‑1 TAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTACATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGACACCACACCAATAGGAATAAAAAAACAatt > 2:150842/1‑138 TAAATTTTCTCGGCATAAATGCGTCGTCTATGTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTG < 1:41353/141‑1 TAAATCTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTG < 1:79542/141‑1 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATTTTCTTGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAATTAAGCAACAACACTAATATAAATAAAAAAACAGTGT > 2:296202/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATACTTCTTT‑TAATGAAACAAAAAGTAATCAACAACACCAATAGGAATAAAAAAACAGTat > 2:343314/1‑139 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT > 1:17906/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT > 2:7473/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT < 1:341747/141‑1 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT > 2:42822/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT < 2:293758/141‑1 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT < 1:123553/141‑1 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATACTACTACAAAAACAaagt > 2:51734/1‑137 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAAAAAGAAGAAAAAAACAATGT > 2:86243/1‑141 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACAACAATAGGAATAAAAAAACAGTGT > 1:36365/1‑141 AAATTTTCTCGGCATAAATGCGTAGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAACGCAT‑CATCTTTATATTAATACAATAAGTATGCTACAACATTAATAGGAATAAAAAAAaaataa > 1:26899/1‑135 AAATTTTCTCCGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT < 1:316288/141‑1 AAATTTTCTCAGAATAAATACCTCTTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGT < 2:39239/141‑1 AATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATACAAACATAGGTTGGCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTG < 1:350553/141‑1 AATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTG > 1:197034/1‑141 AATTTTCTCGGCATAAATGCGTCGTCTATTTTTTACTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGTAATAAAAAAACAcagca > 2:242797/1‑136 AATTTTCTCGGCATAAATGCGTCGTCTATTTCTTATTTCCTTCCTGATAATCATAATTTCCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCACTATAAATAACAAAACAATGTt > 2:161812/1‑140 ATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGTAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTGA > 1:46574/1‑141 ATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTGA < 1:304749/141‑1 ATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTGA > 1:306933/1‑141 CATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000731/2225‑2372‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaataaaTTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCAT‑CATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAAACAGTGTGA < NC_012417/1946‑1807 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |