| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | CP000731 | 6,552 | +TCTCCAGGCACTTGTGCATATTCTGAAA | 100% | intergenic (+1069/‑419) | cadX → / → USA300HOU_pUSA300HOUMR0010 | cadmium efflux regulator/MarR family transcriptional regulator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | = 6552 | 0 (0.000) | 114 (0.840) +TCTCCAGGCACTTGTGCATATTCTGAAA |
77/204 | NT | 100% | intergenic (+1069/‑419) | cadX/USA300HOU_pUSA300HOUMR0010 | cadmium efflux regulator/MarR family transcriptional regulator |
| ? | CP000731 | 6553 = | 0 (0.000) | intergenic (+1070/‑418) | cadX/USA300HOU_pUSA300HOUMR0010 | cadmium efflux regulator/MarR family transcriptional regulator | |||||
Only 100 of 156 total aligned reads displayed.
CTAAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTACACC > CP000731/6416‑6691 | cTAAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctc > 1:33947‑M1/1‑137 (MQ=255) tAAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctcc > 1:600886‑M1/1‑136 (MQ=255) tAAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctcc > 2:301372‑M1/1‑136 (MQ=255) aaaTTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGTACAATAAACtctccag > 2:468140‑M1/1‑134 (MQ=255) aaaTTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccag < 1:49801‑M1/141‑8 (MQ=255) aaaTTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccag < 2:48329‑M1/141‑8 (MQ=255) aaTTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCTGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccagg < 1:98549‑M1/141‑9 (MQ=255) aGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcactgg < 2:631363‑M1/141‑15 (MQ=255) aGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTAAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCCTATACCATAGACTCTTTAAT‑ATACATTTCTTTGGGAATATTAACAATCCACtctacatgcacttt > 2:311480‑M1/1‑127 (MQ=255) ttGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgc < 2:370482‑M1/141‑18 (MQ=255) gtgATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcaa > 1:267297‑M1/1‑122 (MQ=255) gtgATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTATCTCATGAGAAATTT‑TTGGGGAATAGGAACAATCCACtctccaggcacttgtgcat > 2:454174‑M1/1‑122 (MQ=255) tttGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGTGGAATAGGAACAATCCACtctccaggcacttgtgcatattc < 1:344143‑M1/141‑24 (MQ=255) ttGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattct < 2:81865‑M1/141‑25 (MQ=255) tGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctg < 1:261953‑M1/141‑26 (MQ=255) tGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctg < 1:543772‑M1/141‑26 (MQ=255) tGATATTCATTCCATATTTTTCTAGTTCAAAAATTCATAACTCTGCCGTAAAACCGTCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctg < 2:133711‑M1/141‑26 (MQ=255) atatTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaa < 1:224290‑M1/141‑28 (MQ=255) atatTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaa < 1:380839‑M1/141‑28 (MQ=255) atatTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTCTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaa < 1:176903‑M1/141‑28 (MQ=255) tcattcCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatc > 2:535121‑M1/1‑110 (MQ=255) attcCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatcca < 2:473184‑M1/141‑34 (MQ=255) tcCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatcttctgaaagtccacc > 1:611165‑M1/1‑106 (MQ=255) ccATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacct > 2:307690‑M1/1‑105 (MQ=255) tatTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGTTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgta > 2:268717‑M1/1‑102 (MQ=255) tttGTATTTCAAAAATTGATAATGCTGCCGTAAAACGGGCGATGGCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtg < 2:266734‑M1/141‑44 (MQ=255) tttCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtg > 1:579796‑M1/1‑98 (MQ=255) tttCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCGTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtg < 1:623441‑M1/141‑44 (MQ=255) cTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtca > 1:317945‑M1/1‑95 (MQ=255) cTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtca > 1:333065‑M1/1‑95 (MQ=255) tAGTTCAAAAATTGATAATGTTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcac < 2:348789‑M1/141‑48 (MQ=255) tAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccccctgtatgtgtcac < 1:26988‑M1/141‑48 (MQ=255) tAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcac > 1:561513‑M1/1‑94 (MQ=255) gTTCAAAAAGTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgc < 1:313776‑M1/141‑50 (MQ=255) ttCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccccctgtatgtgtcacgcc > 2:405966‑M1/1‑91 (MQ=255) ttCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgcc < 1:525625‑M1/141‑51 (MQ=255) taaaaaattGATAATGCTGCAGTAAAACCGGCTGTGACATATACCATAGACTCTTTAAT‑AGACTTTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgcca < 2:142478‑M1/139‑52 (MQ=255) tCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcagttgtgcatattctgaaaatccacctgtatgtgtcacgcca < 2:440199‑M1/141‑52 (MQ=255) ccaAAAAGTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgcca < 1:183183‑M1/140‑52 (MQ=255) cAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTAGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaa < 1:404670‑M1/141‑53 (MQ=255) aaaaaatTGATAATGCAGCCGTAAAACCGGCTGTGCCATATACCATAGAATCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaa < 1:515200‑M1/140‑53 (MQ=255) aTTGATAATGCTGCCGTAAAACCTGCTGTGCCATATACCATAGACTCTTTGAT‑GAAGATGGCTGGGGGAATAGGATCAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatca < 1:23854‑M1/141‑58 (MQ=255) ttGATAATGCTGTGGGAGAACCGTGTGGGCCATATGCTATGGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtcgccaggcacttgtgcatattctgaaaagccagctgtatgtgtcacgccaacatcat < 2:279415‑M1/141‑59 (MQ=255) gATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataa < 1:481696‑M1/141‑61 (MQ=255) aaTGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataacca < 1:312309‑M1/141‑64 (MQ=255) aTGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccag > 2:236193‑M1/1‑77 (MQ=255) tgctgcCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagt > 1:212700‑M1/1‑76 (MQ=255) gctgcCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagta > 2:393834‑M1/1‑75 (MQ=255) gcCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaact > 1:171738‑M1/1‑72 (MQ=255) gcCGTAAAACCGGCTGTGACATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataatcagcaact > 2:428478‑M1/1‑72 (MQ=255) ccGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaacta < 2:59931‑M1/141‑71 (MQ=255) cGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgcatgtgtcacgccaacaccataaccagtaactaatacatcat > 2:192443‑M1/1‑62 (MQ=255) tgtgCCATCTACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgcc < 1:384646‑M1/141‑84 (MQ=255) tgtgCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatctcc > 1:466767‑M1/1‑58 (MQ=255) ggggccaTATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgcc < 2:28569‑M1/138‑84 (MQ=255) gtgCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgcct < 2:577725‑M1/141‑85 (MQ=255) ccATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttct > 2:29060‑M1/1‑54 (MQ=255) cATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgcattctt > 2:153206‑M1/1‑53 (MQ=255) atatACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccgttaactgtttcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttcttt < 1:634050‑M1/141‑90 (MQ=255) tataCCATAGACTCTTTACT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattatgaaaatccacgagtatgtgtcacgccaacatcataaccagtaactactaatttagagccttcttta > 2:36573‑M1/1‑51 (MQ=255) tataCCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactactacattatcgccttcttta > 2:245907‑M1/1‑51 (MQ=255) tataCCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttcttta > 1:76196‑M1/1‑51 (MQ=255) aCCATCGACTCTCTAAT‑ATACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtttcatgctgacatcatatccattaactaatacattatcgccttctttaaac < 1:152705‑M1/141‑94 (MQ=255) cATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaactt > 1:247515‑M1/1‑46 (MQ=255) ggaCTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatc < 2:574862‑M1/140‑99 (MQ=255) aGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaatcgccacaatatcgccttctttaaacttatc > 1:270740‑M1/1‑43 (MQ=255) ctctTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcatt < 2:229953‑M1/141‑102 (MQ=255) ctTTAAT‑AGACATTTCTTGGGCAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcatatccagtaactaatacattatcgccttctttaaacttatcattcg < 1:352410‑M1/141‑104 (MQ=255) tttAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcga > 2:35668‑M1/1‑37 (MQ=255) ttAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaa > 2:179466‑M1/1‑36 (MQ=255) tAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataacccgtaactaatacattatcgccttctttaaacttatcattcgaac > 1:112194‑M1/1‑35 (MQ=255) tAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtcactaatacattatcgccttctttaaacttatcattagaac > 2:419759‑M1/1‑35 (MQ=255) tAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACtcgccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaac < 1:602053‑M1/141‑107 (MQ=255) aaT‑AGACATTTCTTGGGGAATAGGTACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaact > 1:539398‑M1/1‑34 (MQ=255) aaT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaact > 2:318541‑M1/1‑34 (MQ=255) aT‑AGGCATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaactt < 2:541695‑M1/141‑109 (MQ=255) aT‑AGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttctcattcgaactt > 1:67828‑M1/1‑33 (MQ=255) aCATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgatt < 2:34341‑M1/141‑113 (MQ=255) cATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattt > 1:492731‑M1/1‑28 (MQ=255) cATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgatta > 1:286663‑M1/1‑28 (MQ=255) aTTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattca < 1:32812‑M1/141‑115 (MQ=255) ttGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttaattcaacaat > 2:494923‑M1/1‑22 (MQ=255) ttgggaaTAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataacaagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaata < 2:22839‑M1/139‑121 (MQ=255) ggggAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatac > 1:431346‑M1/1‑20 (MQ=255) ggtaatagAAACAATCCACtcgccagtcacatgtgcatattctcaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacc < 2:469635‑M1/138‑123 (MQ=255) ggAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacct > 1:583463‑M1/1‑18 (MQ=255) ggAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaataccc > 1:389272‑M1/1‑18 (MQ=255) ggAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattccaacttgattaaacaatacct > 1:547743‑M1/1‑18 (MQ=255) gAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctg > 1:115073‑M1/1‑17 (MQ=255) aGGAACAAACCACtctccaggcacttgtgcatattctgaaaatcaacctgtatgtctcacgccaacatcataaccagtaactaataaatcatcgcctgacttaaacttatccttcgaacttcaatcaaaaatccctgcaac > 2:40669‑M1/1‑13 (MQ=255) gAACAATCCACtctccaggcacttgtgcatattctgaaaatccacatgtatgtgtcacgccaacatcataaccagaaactactacataatcgccttctttaaactaatcattcaaaattgaatcaaacataactgcaaaaa > 2:421188‑M1/1‑11 (MQ=255) aaCAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaatc > 1:531209‑M1/1‑10 (MQ=255) aTCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaatctata < 1:590002‑M1/141‑136 (MQ=255) aTCCACtctccaggcactagtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttcttcaaacttatcattcgaacttgattcaacaatacctgcaaaatctata < 1:224904‑M1/141‑136 (MQ=255) tCCACtctccaggcacttgtgcatattctcaagatggagccctatgtctcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaatctatac < 1:88412‑M1/141‑137 (MQ=255) ccACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaatctatacc > 2:373273‑M1/1‑4 (MQ=255) ccACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaatctatacc < 1:307690‑M1/141‑138 (MQ=255) cACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgcccgactaatcttttagtactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaatctatacca < 1:148909‑M1/141‑139 (MQ=255) cACtctccaggcacttgtgcatactctgaaaatccacctggatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaatctatacca < 1:167983‑M1/141‑139 (MQ=255) aCtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaatctataccag > 1:577938‑M1/1‑2 (MQ=255) | CTAAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAAT‑AGACATTTCTTGGGGAATAGGAACAATCCACATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTACACC > CP000731/6416‑6691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |