| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 891727 | 207 (0.580) | 14 (0.040) | 8/152 | NT | 5.3% | intergenic (+145/‑594) | USA300HOU_RS04385/rnmV_2 | hypothetical protein/Ribonuclease M5 |
| ? | USA300TCH1516_ALE | = 1695091 | 303 (0.890) | intergenic (‑297/+233) | hemN_1/lepA | Oxygen‑independent coproporphyrinogen‑III oxidase‑like protein YqeR/Elongation factor 4 | |||||
Only 100 of 294 total aligned reads displayed.
GGGAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAA > USA300TCH1516_ALE/891637‑891817 | gggAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCT > 2:2044971‑M1/1‑91 (MQ=255)gggAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCT > 2:6239822‑M1/1‑91 (MQ=255)gggAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCT > 1:2472852‑M1/1‑91 (MQ=255) ggAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTtctc > 1:6893465/1‑91 (MQ=34) gAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTctct < 1:2125493/91‑1 (MQ=34) gAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTctct > 1:22420/1‑91 (MQ=34) aGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCtt < 1:3323110/91‑1 (MQ=33) gTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCttt > 1:3712796/1‑91 (MQ=34) tGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTttg < 2:176391/91‑1 (MQ=34) ggACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTttgtt < 2:4589190/91‑1 (MQ=33) gACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCGTTGTCTGTAGAAATTGGGAATCCAATTTCTCTttgttg < 2:4112294/91‑1 (MQ=21) aCATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTgg > 2:839443/1‑91 (MQ=33) aCATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTgg < 1:3067941/91‑1 (MQ=34) cATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTTTAGAAATTGGGAATCCAATTTCTCTTTGTTggg > 1:5527253/1‑91 (MQ=18) cATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTggg < 2:3224248/91‑1 (MQ=33) cATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTggg > 2:6574658/1‑91 (MQ=33) aTAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTgggg < 1:1201750/91‑1 (MQ=32) aTAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTgggg > 1:154853/1‑91 (MQ=32) aTAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTgggg > 2:3679699/1‑91 (MQ=32) cGCAAAATTTATTTCGTCGTCCCACCCCAACGTGCATTGTCTGTAGAAATTGGATTCCCAATTTCTacagacaatgcaagttggggtggga < 1:6126999‑M1/91‑26 (MQ=255) aaaTTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCAt < 1:3051641/91‑1 (MQ=31) tatttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCt < 1:1839705/91‑1 (MQ=37) tatttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCt < 1:2143508/91‑1 (MQ=37) ttttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTg < 2:4345540/90‑1 (MQ=38) atttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTg > 2:1091592/1‑91 (MQ=38) tttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGt > 2:2525339/1‑91 (MQ=39) tttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGt < 2:2991069/91‑1 (MQ=39) tttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGt > 2:5964453/1‑91 (MQ=39) ttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTa > 1:4920503/1‑91 (MQ=40) tcCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTc > 2:1029541/1‑91 (MQ=255) tcCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTc < 1:6322371/91‑1 (MQ=255) tcCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTc > 2:354615/1‑91 (MQ=255) cccACCCCAACTTACATTGTCTGTAGAAATTGGGAATCCAATTTCTacagacaatgtaagttggggtgggacgacgaaataaattttgaga > 1:2864485‑M1/1‑46 (MQ=255) ccACCCCAACTTGCATTGTCTGCAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCtt > 2:5312821/1‑91 (MQ=255) cACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCttt > 2:4549411/1‑91 (MQ=255) cACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCttt < 2:5688435/91‑1 (MQ=255) cACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCttt > 2:3990618/1‑91 (MQ=255) ccccAACTTGCATTGTCTGTAGAAATTGGATTCCCAATTTCTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaaat < 1:3841277‑M1/91‑50 (MQ=255) ccccAACTTGCATTGTCTGCAGAAATGGGGAATCCAATGTCTCTTTTTTTGGGCCCATCCCCAACTTGCATTGCCTGGAGAATTTCTTTTc < 2:2083265/91‑1 (MQ=14) cccAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCg > 1:675705/1‑91 (MQ=255) cAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTCTTCGaa > 2:6402364/1‑91 (MQ=255) aCTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAAt < 1:2063545/91‑1 (MQ=255) aCTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAAt < 1:477437/91‑1 (MQ=255) aCTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAAt < 1:5802924/91‑1 (MQ=255) cTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAAtt < 2:4076634/91‑1 (MQ=255) ttGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATtc > 1:5612367/1‑91 (MQ=255) ttGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATtc < 1:5449906/91‑1 (MQ=255) ttGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATtc < 1:5045151/91‑1 (MQ=255) tGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATtct > 2:1210305/1‑91 (MQ=255) tGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATtct > 2:2230218/1‑91 (MQ=255) gCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATtctc < 2:6762175/91‑1 (MQ=255) aTTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCtg > 2:2396673/1‑91 (MQ=255) aTTGTCTCTAGAAATTGGGAATCCAATTTCTagagacaatgcaagttggggtgggacgacgaaataaattttgtgaaaatatcatttctgt < 1:4214241‑M1/91‑61 (MQ=255) tGTCTGTAGAAATTGGGAATCCAATTTCTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaagtatcatttctgtcc < 1:1954632‑M1/91‑63 (MQ=255) tGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCtgtg < 1:1976877/91‑1 (MQ=255) gTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTgtgt < 1:5277282/91‑1 (MQ=255) gTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTgtgt < 2:1335233/91‑1 (MQ=255) gTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTgtgt < 1:6630034/91‑1 (MQ=255) gTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTgtgt < 2:5022970/91‑1 (MQ=255) tCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGtt < 2:3158731/91‑1 (MQ=255) tCTGTAGAAATTGGGAATCCAATTTCTCTTAGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGtt < 1:5380122/91‑1 (MQ=255) gTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTggg < 1:1101898/91‑1 (MQ=255) tAGAAATTGGGAATCCAATTTCTacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaagtatcatttctgtcccactcc > 1:4580089‑M1/1‑23 (MQ=255) aGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGc < 1:6033439/91‑1 (MQ=255) gAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGcc > 1:718807/1‑91 (MQ=255) aaTTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGcccc < 1:6984962/91‑1 (MQ=255) aaTTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGcccc < 2:266416/91‑1 (MQ=255) aaTTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGcccc < 1:2878950/91‑1 (MQ=255) ttGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTg < 1:3401411/91‑1 (MQ=255) tGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTCCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGa > 1:6853695/1‑91 (MQ=255) gggAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTgg > 1:4142446/1‑81 (MQ=255) gggAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGAc > 2:1067151/1‑91 (MQ=255) gggAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGAc > 2:2932263/1‑91 (MQ=255) gggAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGAc > 1:1422027/1‑91 (MQ=255) gggAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCCCTGTGTTGGGGCCCCTGAc > 2:47322/1‑91 (MQ=255) ggAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACt > 1:1022570/1‑91 (MQ=255) attcccAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTa > 1:4830919/5‑91 (MQ=255) aaTCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAg > 2:4246506/1‑91 (MQ=255) aTCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTg < 2:1687249/85‑1 (MQ=255) aTCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTg > 1:1687249/1‑85 (MQ=255) tcaaaTTTCTATTAAATGGGGCCCATGCCCAACTTGCATTGCCTGTAGAATTTCTTATCGAAATTCTTTGTGTTGTGTCCCCTGAATaaaa < 2:416429/88‑1 (MQ=9) tCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGaa < 1:647428/91‑1 (MQ=255) aaTTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTg < 1:4692357/91‑1 (MQ=255) aaTTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTg < 2:6163523/91‑1 (MQ=255) aTTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGcccc < 1:3802067/78‑1 (MQ=255) aTTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGa > 1:148129/1‑91 (MQ=255) ttCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaa < 2:131986/91‑1 (MQ=255) ttCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaa < 2:6683695/91‑1 (MQ=255) tctcTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaaa < 1:4447170/91‑1 (MQ=255) tctcTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaaa < 2:4941254/91‑1 (MQ=255) tctcTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaaa > 1:4258900/1‑91 (MQ=255) tCTacaggcaatgcaagttggggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccgctcccttatgcatgagttttactc > 1:6622251‑M1/1‑3 (MQ=255) tCTacaggcaatgcaagttggggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccactcccttatgcatgagttttactc > 2:330702‑M1/1‑3 (MQ=255) tCTacaggcaatgcaagttggggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccactcccttatgcatgagttttactc > 1:3541169‑M1/1‑3 (MQ=255) ctctTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaaaa < 1:2693510/91‑1 (MQ=255) ctctTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaaaa > 2:6949708/1‑91 (MQ=255) tctTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaaaaa > 1:3430719/1‑91 (MQ=255) tctTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGaaaaaa < 2:688509/91‑1 (MQ=255) tacaggcaatgcaagttggggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccactcccttatgcatgagttttactcct < 2:3707685‑M1/91‑91 (MQ=255) tacaggcaatgcaagttggggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccactcccttatgcatgagttttactcat < 2:3624389‑M1/91‑91 (MQ=255) | GGGAGTGGGACATAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAA > USA300TCH1516_ALE/891637‑891817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |