| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | = 4399 | 1 (0.460) | 20 (0.010) | 13/244 | 0.1 | 1.6% | intergenic (+364/‑101) | USA300HOU_pUSA300HOUMR0006/cadR | hypothetical protein/cadmium binding protein |
| ? | NC_012417 | = 1963 | 2526 (0.940) | intergenic (+196/+130) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 264 total aligned reads displayed.
TCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAGTTATAATACATTCAAAAATATTTTTGAATGAGGTGTATTATGATTCAAACGGTTGTTGCTGCTGCTGTTCTTTATATTG > CP000731/4261‑4539 | cgggttactttagatactatttattccaattgctttattgatgttgagaaGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCg > 1:451447‑M1/51‑141 (MQ=255) agatactatttattccaattgcTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGt > 2:152062‑M1/23‑141 (MQ=255) ctatttattccaattgcTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATa > 3:333151‑M1/18‑141 (MQ=255) ctatttattccaattgcTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATa > 2:285567‑M1/18‑141 (MQ=255) TTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGa < 2:299978‑M1/134‑1 (MQ=255) TATTGGTGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTg < 1:623341‑M1/131‑1 (MQ=255) TATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAAtt > 2:601849‑M1/1‑130 (MQ=255) ttGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCcgaggctcaacatcaataaattttctcggcataaatgcg > 4:266461‑M1/1‑102 (MQ=255) GATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAAt < 1:500942‑M1/125‑1 (MQ=255) agaaCCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCcgaggctcaacgtcaataaattttctcggcataaatgcgtcgtctattttt > 1:560393‑M1/1‑90 (MQ=255) CCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAAt < 1:777814‑M1/102‑1 (MQ=255) CCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATaa < 3:172970‑M1/104‑1 (MQ=255) CCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATaa > 4:172970‑M1/1‑104 (MQ=255) TAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGa < 2:421553‑M1/111‑1 (MQ=255) AACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAAt > 4:101963‑M1/1‑112 (MQ=255) aCTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatg > 2:649073‑M1/1‑80 (MQ=255) aGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatt > 1:81597‑M1/1‑69 (MQ=255) cATTCGACAAGTTTTGGGATTGTTAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaa < 1:700111‑M1/141‑110 (MQ=255) gTTAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaacaactaatcaacaac > 4:143150‑M1/1‑11 (MQ=255) gTTAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaac > 3:36083‑M1/1‑11 (MQ=255) gTTAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaac < 2:272063‑M1/141‑131 (MQ=255) gTTAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaaa > 2:686047‑M1/1‑11 (MQ=255) gTTAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaaataagcaacaac > 2:699553‑M1/1‑11 (MQ=255) gTTAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataa < 4:4299‑M1/76‑66 (MQ=255) gTTAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttatta < 1:257505‑M1/64‑54 (MQ=255) ttAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaaca > 1:397499‑M1/1‑10 (MQ=255) ttAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaaca > 1:247085‑M1/1‑10 (MQ=255) ttAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaaca < 2:437450‑M1/141‑132 (MQ=255) ttAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaaca < 2:211536‑M1/141‑132 (MQ=255) ttAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaaca > 3:102983‑M1/1‑10 (MQ=255) ttAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaaca > 2:519260‑M1/1‑10 (MQ=255) ttAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaaca < 1:412181‑M1/141‑132 (MQ=255) ttAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaaca > 1:599113‑M1/1‑10 (MQ=255) ttAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaaca > 1:68190‑M1/1‑10 (MQ=255) ttAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttgtcttccagctcgtcaaaagcatcagctttatagaaaaacaaaaagtaagcaacaaca < 1:3349‑M1/141‑132 (MQ=255) ttAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatct < 1:423842‑M1/66‑57 (MQ=255) ttAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttat < 1:490625‑M1/61‑52 (MQ=255) ttAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttat > 2:490625‑M1/1‑10 (MQ=255) ttAAGGGTTCtacacaacatcaataaattttctcggcataaatgcgtagtctattttttattatcttcatgataatcatatttttcaaccatctcgtcaaaagcatcatctttaaagaaaaacaaaaagtaagcaacaaca < 2:376164‑M1/141‑132 (MQ=255) tAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttttttttttttttcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacac > 2:337185‑M1/1‑9 (MQ=255) tAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacac < 4:342396‑M1/141‑133 (MQ=255) tAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacac < 3:152177‑M1/141‑133 (MQ=255) tAAGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatc > 3:61837‑M1/1‑9 (MQ=255) aaGGGTTCttctcaacagcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacacc < 1:167543‑M1/141‑134 (MQ=255) aGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcttctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacacca > 2:320899‑M1/1‑7 (MQ=255) aGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattttcttcatgataataatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacacca > 2:266193‑M1/1‑7 (MQ=255) aGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacacca > 2:677962‑M1/1‑7 (MQ=255) aGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacacca > 1:229544‑M1/1‑7 (MQ=255) aGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacacca > 2:761303‑M1/1‑7 (MQ=255) aGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacacca > 4:247289‑M1/1‑7 (MQ=255) aGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacacca > 1:301259‑M1/1‑7 (MQ=255) aGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacacca > 1:766958‑M1/1‑7 (MQ=255) aGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacacca > 1:766715‑M1/1‑7 (MQ=255) aGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtc > 1:346925‑M1/1‑7 (MQ=255) aGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcg > 2:588776‑M1/1‑7 (MQ=255) aGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcg < 1:588776‑M1/93‑87 (MQ=255) aGGGTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatc < 2:556720‑M1/90‑84 (MQ=255) gggTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaa > 3:252812‑M1/1‑6 (MQ=255) gggTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaa > 2:243839‑M1/1‑6 (MQ=255) gggTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaa > 3:7335‑M1/1‑6 (MQ=255) gggTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaa > 1:567057‑M1/1‑6 (MQ=255) gggTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaa > 1:63088‑M1/1‑6 (MQ=255) gggTTCttctcaacatcaataaatcttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaa > 4:255662‑M1/1‑6 (MQ=255) ggTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaat < 1:135946‑M1/141‑137 (MQ=255) ggTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaat < 1:196775‑M1/141‑137 (MQ=255) gTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaata > 1:36741‑M1/1‑4 (MQ=255) gTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaata < 3:126608‑M1/141‑138 (MQ=255) gTTCttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttt > 2:62920‑M1/1‑4 (MQ=255) ttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatag < 1:280270‑M1/141‑139 (MQ=255) ttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatag < 2:783832‑M1/141‑139 (MQ=255) ttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatag < 2:497721‑M1/141‑139 (MQ=255) ttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatag < 2:133997‑M1/141‑139 (MQ=255) ttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatag < 3:189094‑M1/141‑139 (MQ=255) ttcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatag < 3:263162‑M1/141‑139 (MQ=255) tcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagg > 1:96482‑M1/1‑2 (MQ=255) tcttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatattaaaaaaaaaacaaaaagtaagcaacaacaccaatagg < 2:191936‑M1/141‑140 (MQ=255) cttctcaacatccataaattttctcggcataaatgggtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagga > 2:353734‑M1/1‑1 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctatttttttttttttttttgataataatatttttcttccatctagtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagga > 2:382150‑M1/1‑1 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattattttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatataaaaacaaaaagtaagcaacaacaccaatagga > 2:616271‑M1/1‑1 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcttgataatcatatttttcttccatttcgtcaaaagcatcatcttaatagaaaaacaaaaagtaagcaacaacaccaatagga < 4:131641‑M1/141‑141 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaacaccagaacaacaacaccaatagga > 3:3140‑M1/1‑1 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacgacacccatagaa > 4:225645‑M1/1‑1 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagga > 4:75587‑M1/1‑1 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagga < 1:102542‑M1/141‑141 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagga > 1:178196‑M1/1‑1 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagga > 2:74531‑M1/1‑1 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagga > 1:271938‑M1/1‑1 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagga > 2:52399‑M1/1‑1 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagga < 4:183006‑M1/141‑141 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagga > 3:100405‑M1/1‑1 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagga > 4:165679‑M1/1‑1 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagga > 1:430952‑M1/1‑1 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagga > 1:742081‑M1/1‑1 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagga > 2:45350‑M1/1‑1 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagga > 2:403448‑M1/1‑1 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagga < 3:233746‑M1/141‑141 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaaaaccaaaaaaa < 4:20697‑M1/141‑141 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaa > 4:289082‑M1/1‑1 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaa < 3:289082‑M1/130‑130 (MQ=255) cttctcaacatcaataaattttctcggcataaatgcgacgtctattttttattatcttcatgataatcatatttttcttccatctcgtcacaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagga > 3:215258‑M1/1‑1 (MQ=255) | TCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAGTTATAATACATTCAAAAATATTTTTGAATGAGGTGTATTATGATTCAAACGGTTGTTGCTGCTGCTGTTCTTTATATTG > CP000731/4261‑4539 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |