Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1894340	1894397	58	2 [1]	[1] 2	ytpA/putB	Phospholipase YtpA/Proline dehydrogenase 2

TTATAGCAAATTCACTATGTAGATTTCTATTTATAGTATTATTGTTGTCCATATTATTATATATAAATGAAATCAACATCAATAATAGTGTAATTATACATAATTATTTTTGATTGTTTTTGATGAAAACGCTTTCTCGAATATTTTTTTCATGCTAAACTTATTGTAAACACAAGGGTTTGGAG  >  USA300TCH1516_ALE/1894354‑1894538                                             |                                                                                                                                             ttATAGCAAATTCACTATGTAGATTTCTATTTATAGTATTATTGTTGTCCATATTATTATATATAAATGAAATCAACATCAATAATAGTGTAATTATACATAATTATTTTTGATTGTTTTTGATGAAAACGCTTTCTCGaa                                              <  1:19344/141‑1 (MQ=255)                                             ttgtCCATATTATTATATATAAATGAAATCAACATCAATAATAGTGTAATTATACATAATTATTTTTGATTGTTTTTGATGAAAACGCTTTCTCGAATATTTTTTTCATGCTAAACTTATTGTAAACACAAGGGTTTggag  <  2:113243/141‑1 (MQ=255)                                             |                                                                                                                                             TTATAGCAAATTCACTATGTAGATTTCTATTTATAGTATTATTGTTGTCCATATTATTATATATAAATGAAATCAACATCAATAATAGTGTAATTATACATAATTATTTTTGATTGTTTTTGATGAAAACGCTTTCTCGAATATTTTTTTCATGCTAAACTTATTGTAAACACAAGGGTTTGGAG  >  USA300TCH1516_ALE/1894354‑1894538

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑