| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 109,949:1 | +G | 5.2% | intergenic (+28/‑193) | plc → / → USA300HOU_RS00515 | 1‑phosphatidylinositol phosphodiesterase/putative lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 109,949 | 1 | . | G | 5.2% | 695.7 / 28.6 | 155 | intergenic (+28/‑193) | plc/USA300HOU_RS00515 | 1‑phosphatidylinositol phosphodiesterase/putative lipoprotein |
| Reads supporting (aligned to +/- strand): ref base . (101/46); new base G (3/5); total (104/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 163 total aligned reads displayed.
GCAGGATATACGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTG > USA300TCH1516_ALE/109859‑110039 | gCAGGATATACGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTa > 1:2467759/1‑91 (MQ=255)gCAGGATATACGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTa < 1:372212/91‑1 (MQ=255) cAGGATATACGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑t > 1:196719/1‑91 (MQ=255) ggATATACGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGa > 1:2960060/1‑91 (MQ=255) ggATATACGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGa > 1:2960397/1‑91 (MQ=255) tataCGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGaaaa > 1:2673902/1‑91 (MQ=255) tataCGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGaaaa > 1:2728241/1‑91 (MQ=255) tataCGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGaaaa > 1:53539/1‑91 (MQ=255) ataCGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAAt < 1:2353993/91‑1 (MQ=255) taCGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATa < 1:2289914/91‑1 (MQ=255) cGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGt > 1:3080960/1‑91 (MQ=255) cGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGt > 1:4021603/1‑91 (MQ=255) cGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGt > 1:3882024/1‑91 (MQ=255) gTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGtt < 1:1814171/91‑1 (MQ=255) gTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGtt < 1:1813975/91‑1 (MQ=255) tGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTa > 1:1825370/1‑91 (MQ=255) ggCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGCGTA‑TGAAAATAGTTAg > 1:1484914/1‑91 (MQ=255) ggCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAg > 1:3377201/1‑91 (MQ=255) ggCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAg > 1:1977571/1‑91 (MQ=255) ccTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGAt > 1:466731/1‑91 (MQ=255) tGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTc > 1:419902/1‑91 (MQ=255) aatatGATGATATCGTAAGAGAAATTATAGATAGTAATAAAGAAGGATTCAATAATGATATTTAGACGAGTA‑TGAAAATAGTGAGATTCTa < 1:704669/90‑1 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa > 1:786243/1‑91 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa > 1:646007/1‑91 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa < 1:376933/91‑1 (MQ=255) tatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAat > 1:2382464/1‑91 (MQ=255) tatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAat > 1:2383496/1‑91 (MQ=255) tgatgaTATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAatta > 1:329016/1‑91 (MQ=255) tgatgaTATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAatta > 1:330357/1‑91 (MQ=255) atgatATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAattatt > 1:337989/1‑91 (MQ=255) atgatATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAattatt < 1:1658171/91‑1 (MQ=255) tgatATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTAttt > 1:1140706/1‑91 (MQ=255) atatCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTc > 1:1002141/1‑91 (MQ=255) tatCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTc < 1:3071598/91‑1 (MQ=25) tatCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTc < 1:1010776/91‑1 (MQ=25) tCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCact > 1:2732255/1‑91 (MQ=255) gTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCactac > 1:367500/1‑91 (MQ=255) tAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTCatact < 1:4082427/91‑5 (MQ=21) tAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTCatact < 1:3559161/91‑5 (MQ=21) aaGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTCAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTc > 1:3291041/1‑91 (MQ=255) aaGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTCA‑TACTc < 1:696217/91‑1 (MQ=21) aaGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTc < 1:3630619/91‑1 (MQ=255) aGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCg > 1:3835912/1‑91 (MQ=255) aGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCg > 1:3563735/1‑91 (MQ=255) gTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGt < 1:3955203/91‑1 (MQ=255) gTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGt < 1:3955932/91‑1 (MQ=255) tGAAATTATAGATAGTAATAAATAAGGATTCAGTAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTGTTTTCACTACTCGtt < 1:3538768/91‑1 (MQ=255) tGAAATTATAGATAGTAATAAATAAGGATTCAGTAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTGTTTTCACTACTCGtt < 1:3538023/91‑1 (MQ=255) tGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtt > 1:3073510/1‑91 (MQ=255) gAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGttt > 1:1230103/1‑91 (MQ=255) gAAATTATAGATAGGAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGttt < 1:840379/91‑1 (MQ=255) aaaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtttt < 1:2990780/91‑1 (MQ=255) aaaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtttt > 1:3752511/1‑91 (MQ=255) aaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGttttt > 1:870984/1‑91 (MQ=255) aTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTa > 1:3915478/1‑91 (MQ=255) atagatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAttt > 1:1415545/1‑91 (MQ=255) atagatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAttt > 1:2832641/1‑91 (MQ=255) atagatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAttt > 1:1415356/1‑91 (MQ=255) agatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTg > 1:4118879/1‑91 (MQ=255) agatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTg > 1:149341/1‑91 (MQ=255) gatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGa > 1:3485677/1‑91 (MQ=255) gatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGa > 1:63267/1‑91 (MQ=255) tagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGaaa > 1:287191/1‑91 (MQ=255) aataaataAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATaa < 1:1751836/91‑1 (MQ=255) aataaataAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATaa < 1:36723/91‑1 (MQ=255) aataaataAGGAGTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATaa > 1:3193895/1‑91 (MQ=255) taaataaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGt > 1:605947/1‑91 (MQ=255) taaataaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGt > 1:605821/1‑91 (MQ=255) aataaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGtaa > 1:2857133/1‑91 (MQ=255) taaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGtaata < 1:502889/91‑1 (MQ=255) gATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTc > 1:1646860/1‑91 (MQ=255) aTTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTca > 1:930397/1‑91 (MQ=255) cAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATACTTcaaca > 1:2073293/1‑91 (MQ=255) ataatGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAat > 1:1540504/1‑91 (MQ=255) taatGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAata > 1:730621/1‑91 (MQ=255) atGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTACTTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatt > 1:3509405/1‑91 (MQ=255) atGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatt > 1:1249339/1‑91 (MQ=255) tGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatta > 1:1897144/1‑91 (MQ=255) gATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtattat > 1:2492306/1‑91 (MQ=255) gATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtattat < 1:60882/91‑1 (MQ=255) tatTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATaa > 1:790959/1‑91 (MQ=255) atTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATaaa < 1:2627001/91‑1 (MQ=255) atTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATaaa > 1:2428699/1‑91 (MQ=255) atTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATaaa > 1:2136340/1‑91 (MQ=255) aaGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTg > 1:1588404/1‑91 (MQ=255) aGACGAGTA‑TGAAAATAGTTAGGTTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGa < 1:80979/91‑1 (MQ=255) gACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGaa > 1:2806287/1‑91 (MQ=255) gACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGaa > 1:2371560/1‑91 (MQ=255) gACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGaa < 1:3300696/91‑1 (MQ=255) gACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGaa > 1:1847722/1‑91 (MQ=255) aaCGAGTAGTGAAAATAATTAGAATCTAACTATTTTCA‑TACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGaa > 1:3818921/2‑91 (MQ=18) cGAGTAGTGAAAATAATTAGAATCTAACTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAAc > 1:1168100/1‑91 (MQ=25) cGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACa < 1:2332434/91‑1 (MQ=255) gAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAg < 1:2184619/91‑1 (MQ=255) gAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAg < 1:3621462/91‑1 (MQ=255) aGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGa > 1:2885651/1‑91 (MQ=255) gTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAt > 1:1653732/1‑91 (MQ=255) tA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAtt > 1:2881991/1‑91 (MQ=255) tA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAtt > 1:415776/1‑91 (MQ=255) a‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttg < 1:3681186/91‑1 (MQ=255) | GCAGGATATACGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTG > USA300TCH1516_ALE/109859‑110039 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |