| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | 3772 = | 213 (0.610) | 40 (0.130) | 14/140 | NT | 17.3% | intergenic (+388/‑96) | USA300HOU_pUSA300HOUMR0005/USA300HOU_pUSA300HOUMR0006 | hypothetical protein/hypothetical protein |
| ? | CP000731 | 3805 = | 195 (0.640) | intergenic (+421/‑63) | USA300HOU_pUSA300HOUMR0005/USA300HOU_pUSA300HOUMR0006 | hypothetical protein/hypothetical protein | |||||
Only 100 of 566 total aligned reads displayed.
GCATATATAAGTTTTAGATATAAAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAA > CP000731/3682‑3862 | aaaaagtgatgtagatttatagcccataacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaa > 1:3144264‑M1/91‑91 (MQ=255)aaaaagtgatgtagatttatagcccataacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaa < 1:1602377‑M1/1‑1 (MQ=255) cATATATAAGTTTTAGATATAAAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAA > 1:923972‑M1/1‑91 (MQ=255) cATATATAAGTTTTAGATATAAAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAA > 1:718252‑M1/1‑91 (MQ=255) aaaagtgatgtagatttatagcccataacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaaa > 1:2225492‑M1/90‑91 (MQ=255) atatatAAGTTTTAGATATAAAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAA < 1:1849930‑M1/91‑1 (MQ=255) atataAGTTTTAGATATAAAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAG < 1:2277600‑M1/91‑1 (MQ=255) atataAGTTTTAGATATAAAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAG > 1:1520626‑M1/1‑91 (MQ=255) tataAGTTTTAGATATAAAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGC > 1:1280359‑M1/1‑91 (MQ=255) tataAGTTTTAGATATAAAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGC > 1:3927002‑M1/1‑91 (MQ=255) gtgatgtagatttatagcccataacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGc > 1:954777‑M1/86‑91 (MQ=255) tgatgtagatttatagcccataacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCt > 1:1992495‑M1/85‑91 (MQ=255) ataAGTTTTAGATATAAAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCT < 1:1377394‑M1/91‑1 (MQ=255) atgtagatttatagcccataacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCTAc < 1:1938001‑M1/9‑1 (MQ=255) aaGTTTTAGATATAAAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTAC > 1:3824740‑M1/1‑91 (MQ=255) aGTTTTAGATATAAAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACC < 1:2111231‑M1/91‑1 (MQ=255) gTTTTAGATATAAAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTAccc < 1:777546/91‑1 (MQ=255) tttAGATATAAAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCa < 1:2660090/91‑1 (MQ=255) ttAGATATAAAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAg < 1:3571222/91‑1 (MQ=255) ataAAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCtcactttatc < 1:41106‑M1/91‑11 (MQ=255) ataAAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAg > 1:799704/1‑91 (MQ=255) taAAGCTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAGAGt > 1:3275529/1‑91 (MQ=255) aaaaCTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCtcactttatctg < 1:451570‑M1/91‑13 (MQ=255) aaaaCTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCtcactttatctg < 1:2035356‑M1/91‑13 (MQ=255) aaaCTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGa > 1:421182/1‑91 (MQ=255) ccataacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCTACCCCAGATAAAGTGAg > 1:806482‑M1/68‑91 (MQ=255) cataacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCTACCCCAGATAAAGTGAgg > 1:2936824‑M1/67‑91 (MQ=255) aCTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAgg < 1:2706163‑M2/91‑3 (MQ=255) cTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATACAAAATAAGGGCATAAAAAATAAAAGCTACCCCATATAAAGTGAggt > 1:3180868‑M2/1‑88 (MQ=255) ataacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCTACCCCAGATAAAGTGAGGt > 1:1018163‑M1/66‑91 (MQ=255) ataacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCTACCCCAGATAAAGTGAGGt > 1:57236‑M1/66‑91 (MQ=255) ataacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCTACCCCAGATAAAGTGAGGt > 1:1629696‑M1/66‑91 (MQ=255) tataTGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAggta < 1:3362640‑M2/91‑5 (MQ=255) taacttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCTACCCCAGATAAAGTGAGGTa > 1:3629367‑M1/65‑91 (MQ=255) tatGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCtcactttatctggggtagc < 1:555973‑M1/91‑20 (MQ=255) tatGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAggtagc > 1:1090926‑M2/1‑85 (MQ=255) acttttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCTACCCCAGATAAAGTGAGGTAGc > 1:1138021‑M1/63‑91 (MQ=255) atGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATATAGTGAggtagct > 1:3203977‑M2/1‑84 (MQ=255) atGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAggtagct < 1:180725‑M2/91‑8 (MQ=255) gactcacCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAggtagcttt > 1:2864594‑M2/4‑82 (MQ=255) gAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAggtagcttt < 1:1430469‑M2/91‑10 (MQ=255) ttttgaattacatcgacgatacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCTACCCCAGATAAAGTGAGGTAGCtttt > 1:3416021‑M1/59‑91 (MQ=255) aTCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCtcactttatctggggtagctttta < 1:1239294‑M1/91‑25 (MQ=255) tCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTtttc < 1:1654885/91‑1 (MQ=255) aCCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTtttctt < 1:2390771/91‑1 (MQ=255) cccTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTtttctttc < 1:501100/91‑1 (MQ=255) cTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCAt > 1:4073986/1‑91 (MQ=255) cTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCAt < 1:3463069/91‑1 (MQ=255) cTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCAt < 1:2592794/91‑1 (MQ=255) tAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATa < 1:3377664/91‑1 (MQ=255) tAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATa > 1:218143/1‑91 (MQ=255) aaTCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACg < 1:634959/91‑1 (MQ=255) cTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACACCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTc < 1:3507904/91‑1 (MQ=255) tttAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCt > 1:3207844/1‑91 (MQ=255) tAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCtat > 1:2827435/1‑91 (MQ=255) tAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCtat > 1:2432354/1‑91 (MQ=255) ttatgcccttattttgaattttaagagggcatAAAAAATAAAAGCTACCCCAGATAAAGTGCGGTAGCTTTTTCTTTCATACGGTCtattt > 1:4062225‑M2/33‑91 (MQ=255) tacggcgtcgaaagaaaaataaatagaccgtatgaaagaAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCtattt > 1:1560363‑M1/40‑91 (MQ=255) ATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCtatttat > 1:13517‑M1/1‑91 (MQ=255) TGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCtatttatt < 1:3843020‑M1/91‑1 (MQ=255) GCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTatttattt < 1:3089703‑M1/91‑1 (MQ=255) cccTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCtcactttatctggggtagcttttattttttatgcccttattttgaat < 1:3809508‑M1/91‑48 (MQ=255) CCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTAtttt > 1:3000744‑M1/1‑91 (MQ=255) CCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTAttttt < 1:2310286‑M1/91‑1 (MQ=255) CTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTc > 1:480017‑M1/1‑91 (MQ=255) CTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTGTTc < 1:85691‑M1/91‑1 (MQ=255) TCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCt > 1:1713910‑M1/1‑91 (MQ=255) TCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCt < 1:4049564‑M1/91‑1 (MQ=255) TCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCt < 1:2791785‑M1/91‑1 (MQ=255) TCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCt > 1:2627190‑M1/1‑91 (MQ=255) ctTGAAATTGAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTtttctt < 1:3727524/91‑1 (MQ=255) ctTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTtttctt > 1:2140933/1‑91 (MQ=255) aaaaTTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCg > 1:2676087/1‑91 (MQ=255) aTTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACg < 1:610230/91‑1 (MQ=255) ttCAAAATAGGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGc < 1:3971060/91‑1 (MQ=255) cAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCg > 1:760259/1‑91 (MQ=255) cAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCg > 1:665683/1‑91 (MQ=255) aaaaTAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACgatac < 1:1767827/91‑5 (MQ=255) aaaaTAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGt < 1:3900119/91‑1 (MQ=255) aaaTAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTa < 1:1912915/91‑1 (MQ=255) aaTAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTAt > 1:2089393/1‑91 (MQ=255) aaTAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTAt > 1:1690766/1‑91 (MQ=255) tAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTAtcg < 1:2728822/91‑1 (MQ=255) tAAGGGCATAAAAAATAAAAGCTACCCCAGACAAAGTGAGGTAGGTTTTTCTTCCATTCGGTCTATTTATTTTTCTTTCGACGCCGTAtcg < 1:3308055/91‑1 (MQ=255) agggcatAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTAtcgtc > 1:1412550‑M2/8‑91 (MQ=255) agggcatAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTAtcgtc > 1:35398‑M2/8‑91 (MQ=255) agggcatAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTAtcgtc > 1:306732‑M2/8‑91 (MQ=255) ggcatAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGa > 1:2522892‑M2/6‑91 (MQ=255) catAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATg > 1:3994809‑M2/4‑91 (MQ=255) atAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGt > 1:1006897‑M2/3‑91 (MQ=255) aaaaaaTAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTaa < 1:2340918/91‑1 (MQ=255) aaaaaTAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAAt < 1:890575/91‑1 (MQ=255) aaaaaTAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAAt < 1:1742245/91‑1 (MQ=255) aaaTAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTc > 1:4127700/1‑91 (MQ=255) aaTAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCa > 1:224579/1‑91 (MQ=255) aTAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCaa > 1:1172637/1‑91 (MQ=255) tAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCaaa < 1:2458965/91‑1 (MQ=255) tAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCaaa > 1:1866527/1‑91 (MQ=255) aaaaGCTACCtcactttatctggggtagcttttattttttatgcccttattttgaattttaagagggcattttaaagatttaggggtgatt < 1:1230214‑M1/91‑82 (MQ=255) aaaaGCTACCtcactttatctggggtagcttttattttttatgcccttattttgaattttaagagggcattttaaagatttaggggtgatt < 1:853755‑M1/91‑82 (MQ=255) | GCATATATAAGTTTTAGATATAAAACTATATGAATCACCCCTAAATCTTTAAAATGCCCTCTTAAAATTCAAAATAAGGGCATAAAAAATAAAAGCTACCCCAGATAAAGTGAGGTAGCTTTTTCTTTCATACGGTCTATTTATTTTTCTTTCGACGCCGTATCGTCGATGTAATTCAAAA > CP000731/3682‑3862 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |