| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 1,104,520 | T→A | 11.8% | L309* (TTA→TAA) | pdhB → | Pyruvate dehydrogenase E1 component subunit beta |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 1,104,520 | 0 | T | A | 11.8% | 401.3 / 37.5 | 127 | L309* (TTA→TAA) | pdhB | Pyruvate dehydrogenase E1 component subunit beta |
| Reads supporting (aligned to +/- strand): ref base T (68/44); new base A (7/8); total (75/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 130 total aligned reads displayed.
AACGTGCAATCCTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCGTATTTTAGTC > USA300TCH1516_ALE/1104430‑1104610 | aaCGTGCAATCCTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGtt > 1:2851927/1‑91 (MQ=255) cGTGCAATCCTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTAc > 1:1006574/1‑91 (MQ=255) gTGCAATCCTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTAAcc < 1:1656981/91‑1 (MQ=255) tGCAATCCTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACca < 1:3787459/91‑1 (MQ=255) tGCAATCCTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACca < 1:3786286/91‑1 (MQ=255) tGCAATCCTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTAACca < 1:1928630/91‑1 (MQ=255) gCAATCCTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACcaa > 1:1916966/1‑91 (MQ=255) gCAATCCTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTAACcaa < 1:3999939/91‑1 (MQ=255) gCAATCCTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTAACcaa < 1:3600933/91‑1 (MQ=255) gCAATCCCTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTAACcaa < 1:2078323/91‑1 (MQ=255) cAATCCTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACcaaa < 1:1491104/91‑1 (MQ=255) cAATCCTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACcaaa < 1:1491210/91‑1 (MQ=255) cAATCCTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACcaaa < 1:1492383/91‑1 (MQ=255) cAATCCTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACcaaa < 1:2274211/91‑1 (MQ=255) aaTCCTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACcaaac < 1:40976/91‑1 (MQ=255) aaTCCTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTAACcaaac < 1:1428977/91‑1 (MQ=255) ccTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACcaaacaaa < 1:1959784/91‑1 (MQ=255) tttCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACaaaaa < 1:147859/91‑1 (MQ=255) ttCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAAt > 1:2203588/1‑91 (MQ=255) ttCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAAt > 1:2000912/1‑91 (MQ=255) ttCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAAt > 1:107501/1‑91 (MQ=255) tCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATg < 1:3824955/91‑1 (MQ=255) tCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATg > 1:489396/1‑91 (MQ=255) cATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGa < 1:766373/91‑1 (MQ=255) cATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGa < 1:3573690/91‑1 (MQ=255) aTTAGAAGCACCTATTGGAAGCGTTGCAGCAGCAGATACAATTTCTCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGAc > 1:2040296/1‑91 (MQ=255) aTTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGAc > 1:2040371/1‑91 (MQ=255) gAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGAcatca < 1:1973570/91‑1 (MQ=255) gAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGAcatca < 1:1974005/91‑1 (MQ=255) aaGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGAcatcat > 1:1379315/1‑91 (MQ=255) gCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCg < 1:615882/91‑1 (MQ=255) cACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGa > 1:3505153/1‑91 (MQ=255) cACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGa > 1:1760958/1‑91 (MQ=255) cACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGa < 1:3377479/91‑1 (MQ=255) aCCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGaa > 1:1900201/1‑91 (MQ=255) aTTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAg > 1:820398/1‑91 (MQ=255) ttGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGc < 1:405367/91‑1 (MQ=255) ttGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGc > 1:2098475/1‑91 (MQ=255) ggAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCaa > 1:3530043/1‑91 (MQ=255) ggAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCaa < 1:2395077/91‑1 (MQ=255) aaGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCaaaa > 1:2640654/1‑91 (MQ=255) agagTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAg < 1:757937/91‑1 (MQ=255) gagTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGa > 1:768372/1‑91 (MQ=255) gagTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGa > 1:195120/1‑91 (MQ=255) gagTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGa > 1:199212/1‑91 (MQ=255) agTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGaa > 1:3691515/1‑91 (MQ=255) gTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGaaa > 1:3922223/1‑91 (MQ=255) gcagcagcaGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACtt > 1:1004839/1‑91 (MQ=255) gcagcagcaGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACtt > 1:3701685/1‑91 (MQ=255) cagcagcagATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACttt > 1:1829612/1‑91 (MQ=255) cagcagcagATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACttt > 1:3063135/1‑91 (MQ=255) gcagcagATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAg < 1:2827943/91‑1 (MQ=255) cagcagATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGa > 1:180668/1‑91 (MQ=255) gcagATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAAt > 1:1235277/1‑91 (MQ=255) gcagATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAAt > 1:1852439/1‑91 (MQ=255) gcagATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAAt > 1:3661140/1‑91 (MQ=255) gATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAACCAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAAtttt > 1:3292837/1‑91 (MQ=255) gATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAAtttt > 1:3373155/1‑91 (MQ=255) aTACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTa < 1:3429318/91‑1 (MQ=255) tACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTaa > 1:3429668/1‑91 (MQ=255) tACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTaa > 1:750909/1‑91 (MQ=255) cAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATa < 1:2686345/91‑1 (MQ=255) cAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATa > 1:2019507/1‑91 (MQ=255) aaTTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATAc < 1:2337084/91‑1 (MQ=255) aaTTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATAc < 1:1657313/91‑1 (MQ=255) aaTTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATAc < 1:2337507/91‑1 (MQ=255) aaTTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATAc < 1:2337631/91‑1 (MQ=255) aTTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACa > 1:3418557/1‑91 (MQ=255) tCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTa < 1:1808155/91‑1 (MQ=255) ccATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTaa > 1:564804/1‑91 (MQ=255) cATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTaaa > 1:2025074/1‑91 (MQ=255) ttCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAg > 1:3524091/1‑91 (MQ=255) tCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAAc < 1:3795052/91‑1 (MQ=255) aaGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGa > 1:3166908/1‑91 (MQ=255) aGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGaa > 1:3201620/1‑91 (MQ=255) aGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGaa > 1:826075/1‑91 (MQ=255) aGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGaa > 1:3051077/1‑91 (MQ=255) aGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGaa > 1:3198374/1‑91 (MQ=255) gCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAg > 1:1996093/1‑91 (MQ=255) aaaaTGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAg < 1:2587373/91‑1 (MQ=255) aaaaTGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAg < 1:525716/91‑1 (MQ=255) aaaTGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGc > 1:38130/1‑91 (MQ=255) aaaTGTTTGGTTACCAAACAAAAACGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGc > 1:1774511/1‑91 (MQ=255) aaTGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCg < 1:896579/91‑1 (MQ=255) aTGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCGt > 1:2981147/1‑91 (MQ=255) tGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCGTa < 1:3041007/91‑1 (MQ=255) tGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCGTa < 1:1839341/91‑1 (MQ=255) gTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCGTAt > 1:2265071/1‑91 (MQ=255) gTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCGTAt > 1:2264837/1‑91 (MQ=255) tttGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCGTAtt > 1:2928840/1‑91 (MQ=255) tttGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCGTAtt < 1:1178697/91‑1 (MQ=255) ttGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCGTAttt > 1:1095627/1‑91 (MQ=255) tGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCGTAtttt < 1:1422404/91‑1 (MQ=255) tGGTAACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTCGAATTTTAATACATTTTAAAAGTTAACGACGTTAGCGTAtttt > 1:4142947/1‑91 (MQ=255) tGGTAACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCGTAtttt > 1:3467355/1‑91 (MQ=255) tGGTAACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCGTAtttt > 1:2945820/1‑91 (MQ=255) tGGTAACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCGTAtttt > 1:711704/1‑91 (MQ=255) tGGTAACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCGTAtttt > 1:761138/1‑91 (MQ=255) ggTAACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCGTATTTTa > 1:1263976/1‑91 (MQ=255) tACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCGTATTTTAGtc < 1:2810900/91‑1 (MQ=255) | AACGTGCAATCCTTTCATTAGAAGCACCTATTGGAAGAGTTGCAGCAGCAGATACAATTTATCCATTCACTCAAGCTGAAAATGTTTGGTTACCAAACAAAAATGACATCATCGAAAAAGCAAAAGAAACTTTAGAATTTTAATACATTTTAAAAGTTAACGAAGTTAGCGTATTTTAGTC > USA300TCH1516_ALE/1104430‑1104610 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |