| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 1,221,653 | G→A | 8.8% | intergenic (+68/‑148) | rpoZ → / → coaBC | DNA‑directed RNA polymerase subunit omega/Coenzyme A biosynthesis bifunctional protein CoaBC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 1,221,653 | 0 | G | A | 8.8% | 312.6 / 16.2 | 102 | intergenic (+68/‑148) | rpoZ/coaBC | DNA‑directed RNA polymerase subunit omega/Coenzyme A biosynthesis bifunctional protein CoaBC |
| Reads supporting (aligned to +/- strand): ref base G (42/51); new base A (2/7); total (44/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.95e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
TGATTATTATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCATTTG > USA300TCH1516_ALE/1221564‑1221743 | tGATTATTATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGc < 1:2770545/91‑1 (MQ=255)tGATTATTATGGTAAAGAATAGTTTCGACCATTAAAAATATATGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGc > 1:3594078/1‑91 (MQ=255)tGAGTATTATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGc < 1:3262929/91‑1 (MQ=255) gATTATTATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATTCAAATCAAACGCa < 1:2930139/91‑1 (MQ=255) gATTATTATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCa < 1:3697460/91‑1 (MQ=255) ttattaTGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCAcc > 1:3977870/1‑91 (MQ=255) ttattaTGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCAcc < 1:1253693/91‑1 (MQ=255) ttattaTGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCAcc < 1:3919151/91‑1 (MQ=255) ttatGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTAt > 1:2187968/1‑91 (MQ=255) tatGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATg < 1:1626077/91‑1 (MQ=255) atGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGt > 1:203578/1‑91 (MQ=255) atGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTacat < 1:2039841/91‑4 (MQ=255) atGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTacat < 1:1623094/91‑4 (MQ=255) atGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTacat < 1:1623080/91‑4 (MQ=255) atGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTacat < 1:2367638/91‑4 (MQ=255) tGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTacata < 1:796549/91‑5 (MQ=255) tGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTacata < 1:796764/91‑5 (MQ=255) tGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTacata < 1:217092/91‑5 (MQ=255) ggTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAg > 1:2379117/1‑91 (MQ=255) aaaGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGgtg < 1:1000163/91‑1 (MQ=255) aaaGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGgtg > 1:3118735/1‑91 (MQ=255) aaaGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGgtg < 1:3052916/91‑1 (MQ=255) aaGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGgtgt < 1:3975252/91‑1 (MQ=255) aaGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGgtgt < 1:1534934/91‑1 (MQ=255) aaGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTACATAGgtgc < 1:990285/91‑2 (MQ=255) aaGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACACACCTACATAGgtgc < 1:990338/91‑2 (MQ=255) aggaTAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGgtgtg < 1:1543973/88‑1 (MQ=255) aGAATAGTTACGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGgtgtg > 1:2089606/1‑91 (MQ=255) gAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGgtgtgt > 1:743965/1‑91 (MQ=255) gAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGgtgtgt > 1:1449870/1‑91 (MQ=255) tAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGtttt > 1:2863089/1‑91 (MQ=255) gTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGtttttt < 1:3745926/91‑1 (MQ=255) gTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGtttttt < 1:1808364/91‑1 (MQ=255) gTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGtttttt < 1:2509473/91‑1 (MQ=255) tttCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGttttttt < 1:1398993/91‑1 (MQ=255) tCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAg < 1:2867988/91‑1 (MQ=255) tCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAg > 1:1941274/1‑91 (MQ=255) tCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAg > 1:2417460/1‑91 (MQ=255) tCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAg > 1:2417443/1‑91 (MQ=255) gACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGtt > 1:1638035/1‑91 (MQ=255) gACCATTAAAAATATATGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTTGGTGTGTTTTTTTAGtt > 1:3545560/1‑91 (MQ=255) aCCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGttt < 1:3027009/91‑1 (MQ=255) ccATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTa > 1:1210667/1‑91 (MQ=255) cATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTAt < 1:1964758/91‑1 (MQ=255) cATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCCATGTAGGTGTGTTTTTTTAGTTTAt > 1:3865515/1‑91 (MQ=255) cATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCAATGTAGGTGTGTTTTTTTAGTTTAt > 1:3865450/1‑91 (MQ=255) ttAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATcc < 1:487913/91‑1 (MQ=255) ttAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGGGTTTTTTTAGTTTATcc > 1:907339/1‑91 (MQ=255) aaaaTATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAt > 1:84848/1‑91 (MQ=255) aaaTATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAtg > 1:3079044/1‑91 (MQ=255) atatGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAtgat < 1:1015044/91‑1 (MQ=255) atGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAtgattg < 1:828913/91‑1 (MQ=255) tgtgAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAtgattga > 1:1956360/1‑91 (MQ=255) tgtgAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAAtgattga > 1:2563906/1‑91 (MQ=255) aaGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGtt > 1:388020/1‑91 (MQ=255) aGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTataat < 1:1819679/91‑1 (MQ=255) aGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTataat < 1:1964911/91‑1 (MQ=255) gACGTACATCAAATACGTCAAGGCATATCCAAATCAAATGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTataata > 1:1181898/1‑91 (MQ=255) aCGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTataataa < 1:2592337/91‑1 (MQ=255) cGTACATCAAATACGTCAAGGCATATCCCAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTataataat < 1:1693473/91‑1 (MQ=255) tACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATAc < 1:2771612/91‑1 (MQ=255) cATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTa > 1:3237322/1‑91 (MQ=255) cATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTa > 1:2405881/1‑91 (MQ=255) cAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAAt > 1:2706175/1‑91 (MQ=255) aaaTACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAAtt < 1:2889067/91‑1 (MQ=255) aTACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTg < 1:3349611/91‑1 (MQ=255) aTACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTg < 1:3350479/91‑1 (MQ=255) aTACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTg < 1:2177534/91‑1 (MQ=255) aCGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTa < 1:1636647/91‑1 (MQ=255) cGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGTTGTTATAATAATACTAAATTTGTAt > 1:3873144/1‑91 (MQ=255) gTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATc < 1:3156644/91‑1 (MQ=255) gTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATc < 1:1945834/91‑1 (MQ=255) gTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATc < 1:1219788/91‑1 (MQ=255) gTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATc > 1:429553/1‑91 (MQ=255) gTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATc < 1:3256679/91‑1 (MQ=255) cAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCta > 1:2327594/1‑91 (MQ=255) cAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCta > 1:548410/1‑91 (MQ=255) aaGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCtat > 1:416243/1‑91 (MQ=255) ggCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaa < 1:3667338/91‑1 (MQ=255) atatCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaaaaa < 1:3631273/91‑1 (MQ=255) atatCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaaaaa < 1:361408/91‑1 (MQ=255) atatCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaaaaa < 1:260980/91‑1 (MQ=255) atatCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaaaaa < 1:261124/91‑1 (MQ=255) tatCCAAATCAAACGCACCTATGTAGGTGTGCTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATaaaaaa > 1:489454/1‑91 (MQ=255) atCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAg < 1:42254/91‑1 (MQ=255) aaaTCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAAt > 1:3803768/1‑91 (MQ=255) aaaTCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAAt > 1:3803842/1‑91 (MQ=255) aaTCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATg > 1:2267318/1‑91 (MQ=255) aaaaaaCACACCTACATAGGTGCGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGa > 1:1133369/4‑91 (MQ=37) aTCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGa < 1:1686231/91‑1 (MQ=255) aTCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGa > 1:60784/1‑91 (MQ=255) tCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAg < 1:2479603/91‑1 (MQ=255) tCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAg < 1:2494598/91‑1 (MQ=255) aaaaaCACACCTACATAGGCGCGTTTTTTTAGTTTATACAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAg > 1:3495513/3‑91 (MQ=255) aaaCGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCa < 1:314065/91‑1 (MQ=255) aaaCGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCa < 1:308177/91‑1 (MQ=255) aCGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCAtt < 1:158964/91‑1 (MQ=255) cGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCAttt > 1:1541431/1‑91 (MQ=255) cGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCAttt > 1:1541396/1‑91 (MQ=255) gCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCATTtg > 1:639840/1‑91 (MQ=255) | TGATTATTATGGTAAAGAATAGTTTCGACCATTAAAAATATGTGAAGCTAGACGTACATCAAATACGTCAAGGCATATCCAAATCAAACGCACCTATGTAGGTGTGTTTTTTTAGTTTATCCAATGATTGATGTTATAATAATACTAAATTTGTATCTATAAAAAAGTAATGAGCATTTG > USA300TCH1516_ALE/1221564‑1221743 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |