| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 1,962,395 | A→G | 5.0% | intergenic (‑284/+188) | USA300TCH1516_01825 ← / ← ydeN | tRNA‑Met/Putative hydrolase YdeN |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 1,962,395 | 0 | A | G | 5.0% | 399.1 / 7.7 | 119 | intergenic (‑284/+188) | USA300TCH1516_01825/ydeN | tRNA‑Met/Putative hydrolase YdeN |
| Reads supporting (aligned to +/- strand): ref base A (47/66); new base G (2/4); total (49/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.79e-01 | |||||||||||
Only 100 of 126 total aligned reads displayed.
GTAAAAAAACGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCAATATAAC > USA300TCH1516_ALE/1962305‑1962485 | gtAAAAAAACGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTta < 1:246977/91‑1 (MQ=255)gtAAAAAAACGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTta < 1:3279589/91‑1 (MQ=255)gtAAAAAAACGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTta < 1:435791/91‑1 (MQ=255) aaaaaaCGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATaa < 1:80624/91‑1 (MQ=255) aaaaaaCGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATaa < 1:80623/91‑1 (MQ=255) aaaaaCGCTTCTTATACCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGGTAAAGCATTTAAAAAGGTATAGGAGTTATaaa > 1:3534487/1‑91 (MQ=255) aaCGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGtt < 1:1424285/91‑1 (MQ=255) cGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTa > 1:2823917/1‑91 (MQ=255) cGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTa > 1:185229/1‑91 (MQ=255) gCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTAc < 1:1151291/91‑1 (MQ=255) gCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTAc > 1:3434386/1‑91 (MQ=255) ttcttATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACaa > 1:1154348/1‑91 (MQ=255) ttcttATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACaa > 1:369153/1‑91 (MQ=255) cttATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACg < 1:1688100/91‑1 (MQ=255) ttATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGc < 1:1074855/91‑1 (MQ=255) ttATTCCCTTTCATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGc < 1:3767829/91‑1 (MQ=255) tATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGcc < 1:2583388/91‑1 (MQ=255) tATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGcc < 1:2664634/91‑1 (MQ=255) ttCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGCGTTGTAAACTTTATAACTCCta < 1:1628882/91‑1 (MQ=25) ttCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGCGTTGTAAACTTTATAACTCCta < 1:1560014/91‑1 (MQ=25) cccTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCtata > 1:872016/1‑91 (MQ=255) cTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGCGTTGTAAACTTTATAACTCCTATAcc < 1:3739296/91‑1 (MQ=25) cTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTATAACGCCTATAcc < 1:3171641/91‑1 (MQ=255) ttttATCATATAAGTGTCTAATAGTTGTCATACATAGTGTTAAAGCATTT‑AAAAGGTATAGGCGTTGTAAACTTTATAACTCCTATACCtt < 1:3520259/91‑1 (MQ=18) ttttATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCt > 1:711105/1‑91 (MQ=255) ttttATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCt < 1:2693127/91‑1 (MQ=255) tttATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCtt > 1:542928/1‑91 (MQ=255) tATCATATAAGTGTCTAATATTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCt < 1:2794145/91‑1 (MQ=255) tATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCt > 1:1003849/1‑91 (MQ=255) tATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCt > 1:2656055/1‑91 (MQ=255) aTCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTg < 1:3381026/91‑1 (MQ=255) aTCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTg < 1:757802/91‑1 (MQ=255) aTCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTg < 1:168056/91‑1 (MQ=255) tCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGa > 1:3260990/1‑91 (MQ=255) tCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGa < 1:2842952/91‑1 (MQ=255) tCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGa < 1:972251/91‑1 (MQ=255) cATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGaa < 1:2146103/91‑1 (MQ=255) cATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGaa < 1:2145741/91‑1 (MQ=255) cATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTAGAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGaa < 1:3493251/91‑1 (MQ=255) cATATAAGTGTCGAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGaa > 1:3188866/1‑91 (MQ=255) taAGTTTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAg < 1:1790485/91‑1 (MQ=255) aGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGaa > 1:207447/1‑91 (MQ=255) tgtCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAAt < 1:3384156/91‑1 (MQ=255) gtCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAAtt < 1:2521927/91‑1 (MQ=255) tCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATta < 1:441413/91‑1 (MQ=255) cTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATtat < 1:3087405/91‑1 (MQ=255) aTAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATaaa < 1:3388571/91‑1 (MQ=255) aTAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATaaa > 1:2656872/1‑91 (MQ=255) aGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAg > 1:3611037/1‑91 (MQ=255) gTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGc < 1:3128402/91‑1 (MQ=255) gTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGc < 1:1659641/91‑1 (MQ=255) gTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTg < 1:601073/91‑1 (MQ=255) gTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTg > 1:322710/1‑91 (MQ=255) gTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTg > 1:3476008/1‑91 (MQ=255) tCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGt > 1:3372633/1‑91 (MQ=255) cATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGtt > 1:2608831/1‑91 (MQ=255) cATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGtt > 1:1771333/1‑91 (MQ=255) tAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTac < 1:2346456/91‑1 (MQ=255) tAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTac < 1:2346545/91‑1 (MQ=255) aaaTAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTaca < 1:856538/91‑1 (MQ=255) aaTAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTacac < 1:75846/91‑1 (MQ=255) aGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATAGCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGc < 1:3498600/91‑1 (MQ=255) aGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGc < 1:493775/91‑1 (MQ=255) aGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGc < 1:1945148/91‑1 (MQ=255) aGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGc < 1:1944857/91‑1 (MQ=255) aGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGc < 1:1944159/91‑1 (MQ=255) aGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGc < 1:1945840/91‑1 (MQ=255) aGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGc < 1:704721/91‑1 (MQ=255) aGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGc < 1:705055/91‑1 (MQ=255) aGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGc < 1:1435252/91‑1 (MQ=255) aGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGc < 1:2350393/91‑1 (MQ=255) tgtTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCat < 1:3295944/91‑1 (MQ=255) gtTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCata > 1:2112029/1‑91 (MQ=255) ttAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCatat < 1:3909262/91‑1 (MQ=255) tAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATAtt > 1:1203058/1‑91 (MQ=255) tAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATAtt > 1:1252707/1‑91 (MQ=255) aGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCtt < 1:3144069/91‑1 (MQ=255) cATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtc > 1:1378275/1‑91 (MQ=255) cATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtc < 1:2092671/91‑1 (MQ=255) aTTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtca < 1:2984131/91‑1 (MQ=255) tttAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATACAAGCTTGTTACACCGCATATTCTTtcag > 1:1785676/1‑91 (MQ=255) tttAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtcag > 1:3817668/1‑91 (MQ=255) tttAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtcag > 1:4087328/1‑91 (MQ=255) ttAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtcagt < 1:1292465/91‑1 (MQ=255) tAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtcagtc < 1:2345979/91‑1 (MQ=255) tAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtcagtc < 1:3133407/91‑1 (MQ=255) tAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTtcagtc < 1:3955429/91‑1 (MQ=255) aaaGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGc > 1:646872/1‑91 (MQ=255) aaGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCg > 1:4028449/1‑91 (MQ=255) aaGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCg < 1:2890896/91‑1 (MQ=255) aaGGTATAGGAGTTATAAAGTTTACAACGCCTAGACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCg < 1:3397563/91‑1 (MQ=255) aGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGa > 1:4138989/1‑91 (MQ=255) gTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACt > 1:2202125/1‑91 (MQ=255) ataGGCGTTGTAAACTTTATAACTCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTAc > 1:319758/1‑91 (MQ=25) taGGCGTTGTAAACTTTATAACTCCTATACCTTCTGATAAAGAAATTATAAGAGCTTGTTACACCACATATTCTTTCAGTCAGCGACTAcc > 1:3850221/1‑91 (MQ=21) gAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCAat > 1:132647/1‑91 (MQ=255) ttATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCAAtata > 1:437559/1‑91 (MQ=255) ttATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCAAtata > 1:2357620/1‑91 (MQ=255) ataAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCAATATAAc < 1:2795143/91‑1 (MQ=255) ataAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCAATATAAc < 1:2793964/91‑1 (MQ=255) | GTAAAAAAACGCTTCTTATTCCCTTTTATCATATAAGTGTCTAATAGTTGTCATAAATAGTGTTAAAGCATTTAAAAAGGTATAGGAGTTATAAAGTTTACAACGCCTATACCTTCTGAAAAAGAAATTATAAAAGCTTGTTACACCGCATATTCTTTCAGTCAGCGACTACCAATATAAC > USA300TCH1516_ALE/1962305‑1962485 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |