| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 1,984,316 | A→T | 5.4% | I214F (ATC→TTC) | rluD_3 → | Ribosomal large subunit pseudouridine synthase D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 1,984,316 | 0 | A | T | 5.4% | 324.0 / 7.0 | 93 | I214F (ATC→TTC) | rluD_3 | Ribosomal large subunit pseudouridine synthase D |
| Reads supporting (aligned to +/- strand): ref base A (43/45); new base T (3/2); total (46/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
AATAAACGACGTGTGTCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCTTTATATGGTGATT > USA300TCH1516_ALE/1984226‑1984406 | aaTAAACGACGTGTGTCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGaaa < 1:1408181/91‑1 (MQ=255) tAAACGACGTGTGTCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATc > 1:4025408/1‑91 (MQ=255) aaCGACGTGTGTCTCCTACTGGACAGCGTGCAATTACACACATTTTAACGTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCaa < 1:3593544/91‑1 (MQ=255) cgacgTGTGTCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGt < 1:2539942/91‑1 (MQ=255) cgacgTGTGTCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGt > 1:3895340/1‑91 (MQ=255) cgacgTGTGTCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGt < 1:3992815/91‑1 (MQ=255) acgTGTGTCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTg > 1:650914/1‑91 (MQ=255) cgTGTGTCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGATTTCAAGTTgg < 1:191695/91‑1 (MQ=255) cgTGTGTCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGATTTCAAGTTgg < 1:191572/91‑1 (MQ=255) cgTGTGTCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTgg > 1:688709/1‑91 (MQ=255) cgTGTGTCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTgg > 1:1504237/1‑91 (MQ=255) cgTGTGTCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTgg > 1:688721/1‑91 (MQ=255) gtgtgtCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGa < 1:668982/91‑1 (MQ=255) gtgtgtCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGCTGGa > 1:3456703/1‑91 (MQ=255) tgtgtCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGAt < 1:2906251/91‑1 (MQ=255) gtgtCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATa < 1:551684/91‑1 (MQ=255) gtgtCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATa > 1:1863573/1‑91 (MQ=255) gtCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACt > 1:242679/1‑91 (MQ=255) gtCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACt > 1:371172/1‑91 (MQ=255) ctcCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTgg > 1:1152316/1‑91 (MQ=255) tcCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGa < 1:151520/91‑1 (MQ=255) tcCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGa < 1:151519/91‑1 (MQ=255) ccTACTGGACAGCGTGCAATTACACACATTTTCACTTCAAAAATGATAAAAGAAGCTGTGTGACAACTTGAAATCAAGTTGGATACTGGAc > 1:1974803/1‑91 (MQ=255) ccTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGAc > 1:3274461/1‑91 (MQ=255) cTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACg < 1:1638449/91‑1 (MQ=255) aCTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTa < 1:1277087/91‑1 (MQ=255) ggACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACtc < 1:438125/91‑1 (MQ=255) ggACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACtc > 1:3879491/1‑91 (MQ=255) ggACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACtc < 1:3806360/91‑1 (MQ=255) gACAGCGTGCAATTACACACATTTTAACTTCACAAATGACAAAAGAAGCTGTGTGCCAACTTGAAATCAAGCTGGATACTGGACGTACtcc > 1:2616726/1‑90 (MQ=255) gACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACtca > 1:2616773/1‑91 (MQ=255) aCAGCGTGCAGTTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACtcat < 1:1998934/91‑1 (MQ=255) aCAGCGTGCAATTACGCACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACtcat < 1:879915/91‑1 (MQ=255) aCAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACtcat < 1:1998571/91‑1 (MQ=255) aGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACtcatca < 1:519216/91‑1 (MQ=255) cAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCg > 1:3928181/1‑91 (MQ=255) aTTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCgtg < 1:572751/91‑1 (MQ=255) aTTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCgtg < 1:776101/91‑1 (MQ=255) aTTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCgtg < 1:776223/91‑1 (MQ=255) tACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGtgtg < 1:2829445/91‑1 (MQ=255) tACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGtgtg < 1:2829665/91‑1 (MQ=255) cacaTTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCAtt > 1:155966/1‑91 (MQ=255) cacaTTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCAtt < 1:2662253/91‑1 (MQ=255) acaTTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCAttt < 1:3773321/91‑1 (MQ=255) acaTTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCAttt < 1:792786/91‑1 (MQ=255) acaTTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCAttt < 1:3750916/91‑1 (MQ=255) aTTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAg < 1:840130/91‑1 (MQ=255) ttttAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGc < 1:2238856/91‑1 (MQ=255) tttAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCt < 1:3234426/91‑1 (MQ=255) ttAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTg < 1:3035232/91‑1 (MQ=255) cTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAAt > 1:3629015/1‑91 (MQ=255) cTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAAt > 1:2429317/1‑91 (MQ=255) tCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTg < 1:233207/91‑1 (MQ=255) aaaaTGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTc > 1:1776536/1‑91 (MQ=255) aaaTGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCa < 1:3576303/91‑1 (MQ=255) agtGATAAAAGAAGCTGTGGGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCAc < 1:4089290/89‑1 (MQ=255) aaTGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCAc < 1:3580048/91‑1 (MQ=255) tGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCAccc < 1:519898/91‑1 (MQ=255) gATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCt > 1:2464999/1‑91 (MQ=255) aaaaGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGtt > 1:1380579/1‑91 (MQ=255) aaaaGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGtt > 1:1380103/1‑91 (MQ=255) aaaGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTa > 1:2636292/1‑91 (MQ=255) aaaGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTa > 1:2636266/1‑91 (MQ=255) agaagCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATc < 1:787957/91‑1 (MQ=255) gaagCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCg < 1:985984/91‑1 (MQ=255) aagCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTAttgg < 1:2418951/91‑4 (MQ=255) aagCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCgg < 1:2833234/91‑1 (MQ=255) agCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGt > 1:3566017/1‑91 (MQ=255) agCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGt > 1:3564679/1‑91 (MQ=255) agCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGt < 1:792933/91‑1 (MQ=255) tgtgtgCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGTAATTGGTCACCCTGTTATCGGTGAt > 1:3866652/1‑91 (MQ=255) tgtgtgCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGAt > 1:3795191/1‑91 (MQ=255) gtgtgCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATc > 1:608955/1‑91 (MQ=255) gtgtgCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATc > 1:4066241/1‑91 (MQ=255) gtgtgCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATc > 1:4066344/1‑91 (MQ=255) tgtgCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATcc < 1:3242394/91‑1 (MQ=255) gtgCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCt < 1:3468479/91‑1 (MQ=255) tgCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCtt > 1:3665766/1‑91 (MQ=255) tgCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCtt < 1:3590219/91‑1 (MQ=255) tgCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCtt < 1:3590218/91‑1 (MQ=255) gCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCttt > 1:46082/1‑91 (MQ=255) gCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCttt > 1:46281/1‑91 (MQ=255) ccAACTTGATTTCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCTTta > 1:1168523/1‑91 (MQ=255) aaCTTGATTTCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCTTtata > 1:4101500/1‑91 (MQ=255) aaCTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGATATTGGTCACCCTGTTATCGGTGATCCTTtata > 1:3545539/1‑91 (MQ=255) aCTTGATTTCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCTTTatat > 1:435666/1‑91 (MQ=255) aCTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCTTTatat > 1:2193267/1‑91 (MQ=255) aCTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCTTTatat > 1:2859298/1‑91 (MQ=255) cTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCTTTATATg < 1:4126059/91‑1 (MQ=255) cTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCTTTATATg > 1:1341313/1‑91 (MQ=255) ttGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCTTTATATgg < 1:1225959/91‑1 (MQ=255) gAAATCAAGTTGGATACTGGACGTACTCATCAAATTCTTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCTTTATATGGTg > 1:3503989/1‑91 (MQ=255) gAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCTTTATATGGTg > 1:1174405/1‑91 (MQ=255) gAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTAAGCTGAAATTGGTCACCCTGTTATCGGTGATCCTTTATATGGTg > 1:3288805/1‑91 (MQ=255) aaTCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCTTTATATGGTGAt < 1:3154191/91‑1 (MQ=255) aaTCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCTTTATATGGTGAt < 1:2001761/91‑1 (MQ=255) aTCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTGGCTGAAATAGGTAACCCTGTTATCGGTGATCCTTTATATGGTGAtt < 1:3308444/91‑1 (MQ=255) aTCAAGGTGGAGACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGGCACCCTGTTATCGGTGAGCCTTTATATGGTGAtt < 1:1868861/91‑1 (MQ=255) | AATAAACGACGTGTGTCTCCTACTGGACAGCGTGCAATTACACACATTTTAACTTCAAAAATGATAAAAGAAGCTGTGTGCCAACTTGAAATCAAGTTGGATACTGGACGTACTCATCAAATTCGTGTGCATTTAGCTGAAATTGGTCACCCTGTTATCGGTGATCCTTTATATGGTGATT > USA300TCH1516_ALE/1984226‑1984406 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |