| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 109,958 | G→A | 5.8% | intergenic (+37/‑184) | plc → / → USA300HOU_RS00515 | 1‑phosphatidylinositol phosphodiesterase/putative lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 109,958 | 0 | G | A | 5.8% | 535.7 / 14.4 | 156 | intergenic (+37/‑184) | plc/USA300HOU_RS00515 | 1‑phosphatidylinositol phosphodiesterase/putative lipoprotein |
| Reads supporting (aligned to +/- strand): ref base G (99/48); new base A (4/5); total (103/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.25e-01 | |||||||||||
Only 100 of 158 total aligned reads displayed.
CGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGAAA > USA300TCH1516_ALE/109869‑110048 | cGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGt > 1:4021603/1‑91 (MQ=255) gTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGtt < 1:1813975/91‑1 (MQ=255) gTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGtt < 1:1813957/91‑1 (MQ=255) ggCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAg > 1:3377201/1‑91 (MQ=255) ggCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAg > 1:1977571/1‑91 (MQ=255) aatatGATGATATCGTAAGAGAAATTATAGATAGTAATAAAGAAGGATTCAATAATGATATTTAGACGAGTA‑TGAAAATAGTGAGATTCTa < 1:704669/90‑1 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATCAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa > 1:3500670/1‑91 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa > 1:786243/1‑91 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa > 1:646007/1‑91 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa < 1:376933/91‑1 (MQ=255) tatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAat > 1:2383496/1‑91 (MQ=255) tatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAat > 1:2382577/1‑91 (MQ=255) tgatgaTATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAatta > 1:329016/1‑91 (MQ=255) gatgatATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAattat < 1:1824146/91‑1 (MQ=255) atgatATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAattatt < 1:1658171/91‑1 (MQ=255) atgatATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAattatt < 1:1658210/91‑1 (MQ=255) tgatATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTAttt > 1:1140706/1‑91 (MQ=255) atatCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTc > 1:1002141/1‑91 (MQ=255) tatCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTc < 1:1010776/91‑1 (MQ=25) atCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCac > 1:236142/1‑91 (MQ=255) gTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCactac > 1:1533650/1‑91 (MQ=255) gTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCactac > 1:3672592/1‑91 (MQ=255) gTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCactac > 1:367500/1‑91 (MQ=255) tAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTCatact < 1:3559161/91‑5 (MQ=21) aaGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTCAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTc > 1:3290978/1‑91 (MQ=255) aaGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTCAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTc > 1:3291055/1‑91 (MQ=255) aaGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTCA‑TACTc < 1:696217/91‑1 (MQ=21) aaGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTc < 1:3630619/91‑1 (MQ=255) aGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCg > 1:3835912/1‑91 (MQ=255) gTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGt < 1:527979/91‑1 (MQ=255) gTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGt < 1:3955394/91‑1 (MQ=255) gTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGt < 1:3958032/91‑1 (MQ=255) gTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGt < 1:1940488/91‑1 (MQ=255) tGAAATTATAGATAGTAATAAATAAGGATTCATTAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTGTTTTCACTACTCGtt < 1:3538135/91‑1 (MQ=255) tGAAATTATAGATAGTAATAAATAAGGATTCAGTAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTGTTTTCACTACTCGtt < 1:3538023/91‑1 (MQ=255) tGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtt > 1:3074368/1‑91 (MQ=255) tGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtt > 1:3073510/1‑91 (MQ=255) gAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGttt > 1:1230103/1‑91 (MQ=255) gAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGttt < 1:3137259/91‑1 (MQ=255) gAAATTATAGATAGGAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGttt < 1:840379/91‑1 (MQ=255) aaaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtttt > 1:2769747/1‑91 (MQ=255) aaaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtttt > 1:3752511/1‑91 (MQ=255) aaaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtttt < 1:2990780/91‑1 (MQ=255) aaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGttttt > 1:870984/1‑91 (MQ=255) aTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTa > 1:3915478/1‑91 (MQ=255) ttATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAt > 1:2118573/1‑91 (MQ=255) atagatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAttt > 1:1415545/1‑91 (MQ=255) atagatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAttt > 1:2832641/1‑91 (MQ=255) atagatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAttt > 1:1415356/1‑91 (MQ=255) agatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTg > 1:2933167/1‑91 (MQ=255) agatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTg > 1:149341/1‑91 (MQ=255) gatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGa > 1:63267/1‑91 (MQ=255) tagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGaaa > 1:287191/1‑91 (MQ=255) taaataaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGt > 1:605947/1‑91 (MQ=255) taaataaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGt > 1:605821/1‑91 (MQ=255) aataaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGtaa > 1:2857133/1‑91 (MQ=255) taaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGtaata < 1:502889/91‑1 (MQ=255) taaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAGTTTGAAAATAAGtaata > 1:3549887/1‑91 (MQ=255) aGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTaataat > 1:3349501/1‑91 (MQ=255) ggATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTACTTATTTTCACTACTCGTTTTTATTTTGAACATAAGTAATAAtt > 1:4147620/1‑91 (MQ=255) ggATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAAtt > 1:3709169/1‑91 (MQ=255) gATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTc > 1:1647580/1‑91 (MQ=255) aTTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTca > 1:930397/1‑91 (MQ=255) cAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATACTTcaaca > 1:2073293/1‑91 (MQ=255) cAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTcaaca < 1:4113551/91‑1 (MQ=255) cAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTcaaca > 1:1862521/1‑91 (MQ=255) ataatGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAat > 1:3660392/1‑91 (MQ=255) ataatGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAat > 1:3456600/1‑91 (MQ=255) taatGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAata > 1:730621/1‑91 (MQ=255) atGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTACTTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatt > 1:3509405/1‑91 (MQ=255) atGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatt > 1:1249323/1‑91 (MQ=255) gATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtattat < 1:60882/91‑1 (MQ=255) gATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtattat > 1:2492306/1‑91 (MQ=255) atTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATaaa < 1:2627001/91‑1 (MQ=255) atTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATaaa > 1:2428699/1‑91 (MQ=255) ttAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAAt > 1:747022/1‑91 (MQ=255) ttAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAAt > 1:1598575/1‑91 (MQ=255) aaGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTg > 1:1588404/1‑91 (MQ=255) aGACGAGTA‑TGAAAATAGTTAGGTTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGa < 1:80979/91‑1 (MQ=255) aGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGa < 1:80964/91‑1 (MQ=255) aGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGa < 1:3038504/91‑1 (MQ=255) gACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGaa > 1:2371560/1‑91 (MQ=255) gACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGaa > 1:1847722/1‑91 (MQ=255) gACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGaa < 1:3300696/91‑1 (MQ=255) gACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGaa > 1:2806287/1‑91 (MQ=255) gACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGaa < 1:3895057/91‑1 (MQ=255) cGAGTAGTGAAAATAATTAGAATCTAACTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAAc > 1:1168100/1‑91 (MQ=25) gAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAg < 1:2184619/91‑1 (MQ=255) gAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAg < 1:3621439/91‑1 (MQ=255) gAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAg < 1:2295839/91‑1 (MQ=255) tA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAtt > 1:2881991/1‑91 (MQ=255) tA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAtt > 1:415776/1‑91 (MQ=255) a‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttg > 1:2702155/1‑91 (MQ=255) gtGAAAATAATTAGAATCTAACTATTTTCA‑TACTCGTCTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttgt > 1:1447344/2‑91 (MQ=21) aaaaTAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttgttt > 1:2738669/1‑91 (MQ=255) aaTAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttgtttgt < 1:4097309/91‑1 (MQ=255) tAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGa > 1:426919/1‑91 (MQ=255) aGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGaa > 1:2247784/1‑91 (MQ=255) aGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGaa > 1:2512298/1‑91 (MQ=255) gTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGaaa > 1:3838784/1‑91 (MQ=255) | CGTGGCCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGAAA > USA300TCH1516_ALE/109869‑110048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |