| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 109,964 | T→A | 7.1% | intergenic (+43/‑178) | plc → / → USA300HOU_RS00515 | 1‑phosphatidylinositol phosphodiesterase/putative lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 109,964 | 0 | T | A | 7.1% | 533.2 / 22.5 | 154 | intergenic (+43/‑178) | plc/USA300HOU_RS00515 | 1‑phosphatidylinositol phosphodiesterase/putative lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (97/46); new base A (6/5); total (103/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 155 total aligned reads displayed.
CCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGAAATTTTT > USA300TCH1516_ALE/109874‑110053 | ccTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGAt > 1:466731/1‑91 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATCAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa > 1:3500670/1‑91 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa > 1:786243/1‑91 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa > 1:646007/1‑91 (MQ=255) atatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTaa < 1:376933/91‑1 (MQ=255) tatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAat > 1:2382464/1‑91 (MQ=255) tatGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAat > 1:2382577/1‑91 (MQ=255) atgatATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAattatt < 1:1658210/91‑1 (MQ=255) atgatATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAattatt > 1:337989/1‑91 (MQ=255) tgatATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTAttt > 1:1140706/1‑91 (MQ=255) atatCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTc > 1:1002141/1‑91 (MQ=255) tatCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTc < 1:1010776/91‑1 (MQ=25) atCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCac > 1:236142/1‑91 (MQ=255) tCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCact > 1:2732255/1‑91 (MQ=255) gTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCactac > 1:3672592/1‑91 (MQ=255) tAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTCatact < 1:3559161/91‑5 (MQ=21) tAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTCatact < 1:4082427/91‑5 (MQ=21) aaGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTCAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTc > 1:3291055/1‑91 (MQ=255) aaGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTCAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTc > 1:3290978/1‑91 (MQ=255) aaGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTAGTGAAAATAATTAGAATCTAACTATTTTCA‑TACTc < 1:696217/91‑1 (MQ=21) aaGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTc < 1:3630619/91‑1 (MQ=255) aGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCg > 1:3835912/1‑91 (MQ=255) aGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCg > 1:3563735/1‑91 (MQ=255) gTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGt < 1:1940488/91‑1 (MQ=255) gTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGt < 1:527979/91‑1 (MQ=255) gTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGt < 1:3958032/91‑1 (MQ=255) gTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGt < 1:3955394/91‑1 (MQ=255) gTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGt < 1:3955203/91‑1 (MQ=255) tGAAATTATAGATAGTAATAAATAAGGATTCAGTAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTGTTTTCACTACTCGtt < 1:3538768/91‑1 (MQ=255) tGAAATTATAGATAGTAATAAATAAGGATTCAGTAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTGTTTTCACTACTCGtt < 1:3538023/91‑1 (MQ=255) tGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtt > 1:3074368/1‑91 (MQ=255) tGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtt > 1:3073510/1‑91 (MQ=255) gAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGttt > 1:1230103/1‑91 (MQ=255) gAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGttt < 1:3137259/91‑1 (MQ=255) gAAATTATAGATAGGAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGttt < 1:840379/91‑1 (MQ=255) aaaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtttt > 1:3752511/1‑91 (MQ=255) aaaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtttt < 1:729417/91‑1 (MQ=255) aaaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtttt > 1:2769747/1‑91 (MQ=255) aaaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGtttt < 1:2990780/91‑1 (MQ=255) aaTTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGttttt > 1:870984/1‑91 (MQ=255) ttATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAt > 1:2118573/1‑91 (MQ=255) atagatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAttt > 1:1415356/1‑91 (MQ=255) atagatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAttt > 1:2832641/1‑91 (MQ=255) atagatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTAttt > 1:1415452/1‑91 (MQ=255) agatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTg > 1:149341/1‑91 (MQ=255) agatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTg > 1:4118879/1‑91 (MQ=255) agatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTg > 1:2933167/1‑91 (MQ=255) gatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGa > 1:63267/1‑91 (MQ=255) gatagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGa > 1:3485677/1‑91 (MQ=255) tagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGaaa > 1:287191/1‑91 (MQ=255) tagTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGaaa > 1:286666/1‑91 (MQ=255) gTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAAt > 1:2564082/1‑91 (MQ=255) aataaataAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATaa < 1:36723/91‑1 (MQ=255) aataaataAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATaa < 1:1751836/91‑1 (MQ=255) aataaataAGGAGTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATaa > 1:3193895/1‑91 (MQ=255) taaataaGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGt > 1:605821/1‑91 (MQ=255) aGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTaataat > 1:3349501/1‑91 (MQ=255) ggATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAAtt > 1:3709169/1‑91 (MQ=255) gATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTc > 1:1646860/1‑91 (MQ=255) gATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTc > 1:1647580/1‑91 (MQ=255) aTTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTca > 1:930397/1‑91 (MQ=255) cAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTcaaca < 1:4113551/91‑1 (MQ=255) cAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTcaaca > 1:1862521/1‑91 (MQ=255) ataatGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAat < 1:2470475/91‑1 (MQ=255) ataatGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAat > 1:1540504/1‑91 (MQ=255) taatGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAata > 1:730621/1‑91 (MQ=255) atGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtatt > 1:1249323/1‑91 (MQ=255) gATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtattat > 1:2492306/1‑91 (MQ=255) gATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtattat < 1:60882/91‑1 (MQ=255) gATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAAtattat < 1:60688/91‑1 (MQ=255) atTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATaaa > 1:2428315/1‑91 (MQ=255) atTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATaaa < 1:2627001/91‑1 (MQ=255) atTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATaaa > 1:2136340/1‑91 (MQ=255) ttAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAAt > 1:1598575/1‑91 (MQ=255) aGACGAGTA‑TGAAAATAGTTAGGTTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGa < 1:80979/91‑1 (MQ=255) aGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGa < 1:3038504/91‑1 (MQ=255) aGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGa < 1:80964/91‑1 (MQ=255) gACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGaa < 1:3300696/91‑1 (MQ=255) gACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGaa > 1:1847722/1‑91 (MQ=255) gACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGaa > 1:2806287/1‑91 (MQ=255) gACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGaa < 1:3895057/91‑1 (MQ=255) cGAGTAGTGAAAATAATTAGAATCTAACTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAAc > 1:1168100/1‑91 (MQ=25) gAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAg < 1:3621462/91‑1 (MQ=255) gAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAg < 1:2295839/91‑1 (MQ=255) aGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGa > 1:2885651/1‑91 (MQ=255) gTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAt > 1:1653732/1‑91 (MQ=255) tA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAtt > 1:415776/1‑91 (MQ=255) a‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttg < 1:3681186/91‑1 (MQ=255) gtGAAAATAATTAGAATCTAACTATTTTCA‑TACTCGTCTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttgt > 1:1447344/2‑91 (MQ=21) aaaaTAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttgttt > 1:2738669/1‑91 (MQ=255) aataatTAGAATCTAACTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGAttgtttgt > 1:1990459/1‑91 (MQ=38) ataattAGAATCTAACTATTTTCACTACTCGCTTGTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAAAAGATTGCTtgtg > 1:3879712/5‑91 (MQ=37) aTAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTtgtg < 1:774969/91‑1 (MQ=255) tAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGa > 1:426919/1‑91 (MQ=255) aGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGaa > 1:3521721/1‑91 (MQ=255) aGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGaa > 1:2247784/1‑91 (MQ=255) tAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGAAAtt > 1:2337738/1‑91 (MQ=255) gATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGAAAtttt > 1:1854422/1‑91 (MQ=255) aTTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGAAAttttt < 1:584714/91‑1 (MQ=255) aTTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGAAAttttt > 1:536/1‑91 (MQ=255) | CCTGGATATGATGATATCGTAAGTGAAATTATAGATAGTAATAAATAAGGATTCAATAATGATATTAAGACGAGTA‑TGAAAATAGTTAGATTCTAATTATTTTCACTACTCGTTTTTATTTTGAAAATAAGTAATAATTCAACAATATTATAAATTGAACAGATTGTTTGTGAAATTTTT > USA300TCH1516_ALE/109874‑110053 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |