Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | USA300TCH1516_ALE | 2,656,546 | A→T | 5.2% | intergenic (‑41/+37) | mhqA_3 ← / ← mhqR | Putative ring‑cleaving dioxygenase MhqA/HTH‑type transcriptional regulator MhqR |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | USA300TCH1516_ALE | 2,656,546 | 0 | A | T | 5.2% | 325.9 / 6.3 | 96 | intergenic (‑41/+37) | mhqA_3/mhqR | Putative ring‑cleaving dioxygenase MhqA/HTH‑type transcriptional regulator MhqR |
Reads supporting (aligned to +/- strand): ref base A (48/42); new base T (3/2); total (52/44) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 |
Only 100 of 101 total aligned reads displayed.
TCATTGCAGTAACATGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCTTGTTGTAAGATT > USA300TCH1516_ALE/2656457‑2656634 | tCATTGCAGTAACATGGTGAATACCTAGTAATTCATGCTTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGaaa > 1:1775058/1‑91 (MQ=255) tCATTGCAGTAACATGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGaaa > 1:2775483/1‑91 (MQ=255) tCATTGCAGTAACATGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGaaa > 1:2775567/1‑91 (MQ=255) tCATTGCAGTAACATGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGaaa > 1:2775169/1‑91 (MQ=255) tCATTGCAGTAACATGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGaaa > 1:3154490/1‑91 (MQ=255) ttGCAGTAACATGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCg < 1:782065/91‑1 (MQ=255) tGCAGTAACATGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAGATCgg > 1:1650214/1‑90 (MQ=255) tGCAGTAACATGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCga > 1:984783/1‑91 (MQ=255) tGCAGTAACATGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCga > 1:225511/1‑91 (MQ=255) tGCAGTAACATGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCga < 1:577045/91‑1 (MQ=255) tGCAGTAACATGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCga < 1:271103/91‑1 (MQ=255) cAGTAACATGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGATTTCgaga < 1:1553185/91‑1 (MQ=255) tAACATGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGATTTCGAGATaa < 1:1861496/91‑2 (MQ=255) tAACATAGTGAATACCTAATAGTTCATGATTATTTGCCATTTTATATACCCTCTTTGT‑CTTTTAGTGTATTTATCTCGAAATCgagaaatt > 1:3221074/1‑87 (MQ=255) aCATGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACtt > 1:3747511/1‑91 (MQ=255) aCATGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACtt > 1:1977427/1‑91 (MQ=255) cATGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACttt < 1:4119705/91‑1 (MQ=255) tGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTaa < 1:1173848/91‑1 (MQ=255) ggTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAAt < 1:2215818/91‑1 (MQ=255) ggTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAAt < 1:632796/91‑1 (MQ=255) gTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATg < 1:3040788/91‑1 (MQ=255) gTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATg < 1:3039759/91‑1 (MQ=255) tGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGt < 1:3249174/91‑1 (MQ=255) gAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTa < 1:252394/91‑1 (MQ=255) gAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTa > 1:1033101/1‑91 (MQ=255) aaTACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTaa < 1:3945516/91‑1 (MQ=255) aaTACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTaa < 1:3945488/91‑1 (MQ=255) aTACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTaaa > 1:2542726/1‑91 (MQ=255) tACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAAt > 1:3695504/1‑91 (MQ=255) tAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAAtcttt > 1:3213753/1‑91 (MQ=255) aGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTa > 1:3960957/1‑91 (MQ=255) gTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAg < 1:1514808/91‑1 (MQ=255) ttCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCa > 1:2652046/1‑91 (MQ=255) cATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACg > 1:1473217/1‑91 (MQ=255) cATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACg > 1:1473216/1‑91 (MQ=255) cATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACg > 1:1310509/1‑91 (MQ=255) cATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACg > 1:1270992/1‑91 (MQ=255) tGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGcc > 1:3257328/1‑91 (MQ=255) tGATTATTTATCATTTTATATACCCTCTTTATATTTTCAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGcc > 1:3498490/1‑91 (MQ=255) gATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCt > 1:2017094/1‑91 (MQ=255) attattTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCtt < 1:4083330/91‑1 (MQ=255) ttatttatCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTa < 1:2524/91‑1 (MQ=255) tatttatCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTac > 1:3778425/1‑91 (MQ=255) tatttatCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTac > 1:1454812/1‑91 (MQ=255) tatttatCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTac < 1:3552949/91‑1 (MQ=255) atttatCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTaca > 1:2639257/1‑91 (MQ=255) ttatCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACt > 1:3218079/1‑91 (MQ=255) tCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCt > 1:2866679/1‑91 (MQ=255) tCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCt > 1:1408630/1‑91 (MQ=255) tCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCt > 1:803849/1‑91 (MQ=255) tCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCt < 1:1606519/91‑1 (MQ=255) tCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCt > 1:711650/1‑91 (MQ=255) tCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCt > 1:1970831/1‑91 (MQ=255) tCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCt > 1:4056513/1‑91 (MQ=255) tCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCt > 1:4017040/1‑91 (MQ=255) cATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTg < 1:1748936/91‑1 (MQ=255) ttttATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTa > 1:3532757/1‑91 (MQ=255) ttttATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTa > 1:3532786/1‑91 (MQ=255) ttATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGa < 1:2751927/91‑1 (MQ=255) atataCCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGAtt > 1:1088656/1‑91 (MQ=255) ataCCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATtgt < 1:4003227/91‑1 (MQ=255) ataCCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATtgt > 1:2765050/1‑91 (MQ=255) ataCCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATtgt < 1:4003395/91‑1 (MQ=255) aCCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGc < 1:3515541/91‑1 (MQ=255) aCCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGc < 1:3795414/91‑1 (MQ=255) aCCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGc < 1:3795377/91‑1 (MQ=255) aCCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGc < 1:3756629/91‑1 (MQ=255) cccTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCa > 1:2287663/1‑91 (MQ=255) tttATATTTTTAGTGCAGTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACTCTACTGTAGATTGTGCACTTAg < 1:1249921/91‑1 (MQ=255) ttATATTTTTAGTGCATTTATCTCGAAATCGTGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGt < 1:3697521/91‑1 (MQ=255) ttATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGt < 1:3697759/91‑1 (MQ=255) atatTTTTAGTGCATTTATCTCGAAATCGAGATACTTTCATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGttt > 1:2359500/1‑91 (MQ=255) atatTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGttt > 1:2703824/1‑91 (MQ=255) atatTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGttt > 1:2360594/1‑91 (MQ=255) tatTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTc > 1:2098772/1‑91 (MQ=255) atTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCt < 1:1907487/91‑1 (MQ=255) atTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCt > 1:2785728/1‑91 (MQ=255) tttttAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCtt > 1:789496/1‑91 (MQ=255) tttttAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCtt > 1:889079/1‑91 (MQ=255) tttttAGTGCATATATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCtt > 1:3205594/1‑91 (MQ=255) ttttAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTa > 1:797115/1‑91 (MQ=255) tttAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTaa < 1:3549168/91‑1 (MQ=255) ttAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTaaa > 1:367294/1‑91 (MQ=255) gTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGc < 1:2431988/91‑1 (MQ=255) tGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCt < 1:2548979/91‑1 (MQ=255) cATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCttg < 1:492993/91‑1 (MQ=255) aaagtATCTCGATTTCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCttg > 1:3963992/5‑91 (MQ=255) aTTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCttgt < 1:2017662/91‑1 (MQ=255) aTTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCttgt < 1:1702482/91‑1 (MQ=255) aTTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCttgt < 1:1632796/91‑1 (MQ=255) aTTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCttgt < 1:155969/91‑1 (MQ=255) agtATCTCGATTTCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCttgtt > 1:2226721/3‑91 (MQ=255) tATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCTtgttgt < 1:1931109/91‑1 (MQ=255) tATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCTtgttgt < 1:3617043/91‑1 (MQ=255) aTCTCGATTTCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCTTGTTGTa > 1:434849/1‑91 (MQ=255) tctcGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCTTGTTGTaa > 1:3298631/1‑91 (MQ=255) ctcGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCTTGTTGTAAg > 1:2464432/1‑91 (MQ=255) ctcGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCTTGTTGTAAg > 1:2932610/1‑91 (MQ=255) cGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCTTGTTGTAAGAt > 1:4006984/1‑91 (MQ=255) gAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCTTGTTGTAAGAtt < 1:440046/91‑1 (MQ=255) | TCATTGCAGTAACATGGTGAATACCTAGTAATTCATGATTATTTATCATTTTATATACCCTCTTTATATTTTTAGTGCATTTATCTCGAAATCGAGATACTTTAATGTAAATTTTTAGTGCACGCCTTACACTTCTGTAGATTGTGCACTTAGTTTCTTAAACGCTTGTTGTAAGATT > USA300TCH1516_ALE/2656457‑2656634 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |