| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 2,754,728 | A→G | 5.4% | intergenic (‑135/+129) | gloB ← / ← opuD_3 | Hydroxyacylglutathione hydrolase/Glycine betaine transporter OpuD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 2,754,728 | 0 | A | G | 5.4% | 364.0 / 8.1 | 110 | intergenic (‑135/+129) | gloB/opuD_3 | Hydroxyacylglutathione hydrolase/Glycine betaine transporter OpuD |
| Reads supporting (aligned to +/- strand): ref base A (56/48); new base G (3/3); total (59/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 | |||||||||||
Only 100 of 113 total aligned reads displayed.
TTTATTTAATTTAATAATCAATGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTT > USA300TCH1516_ALE/2754640‑2754818 | tttatttaATTTAATAATCAATGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAAt > 1:2913941/1‑91 (MQ=255)tttatttaATTTAATAATCAATGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAAt > 1:3120762/1‑91 (MQ=255) tatttaATTTAATAATCAATGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTa > 1:3675186/1‑91 (MQ=255) tatttaATTTAATAATCAATGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTa > 1:1593937/1‑91 (MQ=255) atttaatttaATAATCAATGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTaa < 1:793697/91‑1 (MQ=255) tttaatttaaTAATCAATGAGAGTCTTTCAAACTTCGATTTAGATTATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTaaa < 1:3299633/91‑1 (MQ=255) tttaatttaaTAATCAATGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTaaa < 1:3300559/91‑1 (MQ=255) taatttaatAATCAATGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATc > 1:2645267/1‑91 (MQ=255) aatttaatAATCAATGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAGATTTAAttt < 1:25187/91‑3 (MQ=255) taataaTCAATGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAGATTTAATTTTTTa < 1:3104913/91‑1 (MQ=255) taatCAATGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACGATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTactg > 1:1300312/1‑88 (MQ=255) taatCAATGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTa < 1:967139/91‑1 (MQ=255) aatCAGTGAGAGTCTTTCAAACTTCTATTTAGAATATGCGTCATACAATAAATCAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTac < 1:3856990/91‑1 (MQ=255) tCAATGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTacaa > 1:2129839/1‑91 (MQ=255) cAATGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTacaac > 1:3614663/1‑91 (MQ=255) aaTGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTacaaca > 1:4007548/1‑91 (MQ=255) aaTGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTacaaca < 1:748322/91‑1 (MQ=255) aaTGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTacaaca < 1:864167/91‑1 (MQ=255) aaTGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACNTGGAGCACTAAAAAATTAAATCTTTTAGTacaaca < 1:2471125/91‑1 (MQ=255) aTGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACAt < 1:1852943/91‑1 (MQ=255) aTGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACAt > 1:2379007/1‑91 (MQ=255) tGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACAtt < 1:2304861/91‑1 (MQ=255) agagTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTaa < 1:3762475/91‑1 (MQ=255) gagTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAAt > 1:1261861/1‑91 (MQ=255) agTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATg > 1:159573/1‑91 (MQ=255) gTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGa > 1:2029741/1‑91 (MQ=255) tCTTTCAAACTTCGATTTAGAATATGCTTTATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGaa < 1:3326023/91‑1 (MQ=255) cTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGaaa > 1:2584288/1‑91 (MQ=255) cTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGaaa > 1:2803161/1‑91 (MQ=255) tttCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGaaaa < 1:878823/91‑1 (MQ=255) tCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAAcc < 1:512679/91‑1 (MQ=255) tCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAAcc < 1:2251241/91‑1 (MQ=255) tCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAAcc < 1:1816078/91‑1 (MQ=255) aaCTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTaa < 1:3002206/91‑1 (MQ=255) tCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGt > 1:787468/1‑91 (MQ=255) ttAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATc < 1:1647985/91‑1 (MQ=255) ttAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATc > 1:2734664/1‑91 (MQ=255) tAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATcc > 1:3058179/1‑91 (MQ=255) tAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATcc > 1:3058259/1‑91 (MQ=255) gAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTa > 1:3475764/1‑91 (MQ=255) gAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTa > 1:1658349/1‑91 (MQ=255) aaTATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTAc < 1:1656639/91‑1 (MQ=255) atatGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACa < 1:1014545/91‑1 (MQ=255) atatGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACa < 1:479695/91‑1 (MQ=255) tatGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACaa > 1:264374/1‑91 (MQ=255) atGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAAt > 1:3268709/1‑91 (MQ=255) tGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATg > 1:2350931/1‑91 (MQ=255) tGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATg > 1:446579/1‑91 (MQ=255) gCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGc > 1:3472324/1‑91 (MQ=255) gCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGc > 1:2032624/1‑91 (MQ=255) gCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGc > 1:2035241/1‑91 (MQ=255) gCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGc > 1:3473458/1‑91 (MQ=255) tCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGctac < 1:3919973/91‑1 (MQ=255) tCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGctac < 1:3893240/91‑1 (MQ=255) tCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGctac < 1:2883436/91‑1 (MQ=255) tCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGctac < 1:90501/91‑1 (MQ=255) tCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGctac < 1:2799094/91‑1 (MQ=255) cATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGctact < 1:1443683/91‑1 (MQ=255) cATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGctact < 1:1442422/91‑1 (MQ=255) cATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGctact < 1:862236/91‑1 (MQ=255) cATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGctact > 1:2464404/1‑91 (MQ=255) aTACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGctacta > 1:2602812/1‑91 (MQ=255) aCAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCTTACAATGCTACTaaa > 1:477691/1‑91 (MQ=255) aataaataAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTaaaaa < 1:2106150/91‑1 (MQ=255) aagaaataaGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTaaaaa < 1:2106480/88‑1 (MQ=255) ataaataaGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTaaaaaa > 1:2934524/1‑91 (MQ=255) ataaataaGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTaaaaaa > 1:4093372/1‑91 (MQ=255) aaataaGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAg < 1:2228011/91‑1 (MQ=255) aataaGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAgg > 1:1854232/1‑91 (MQ=255) aataaGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAgg < 1:63201/91‑1 (MQ=255) taaGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAgggg < 1:3177222/91‑1 (MQ=255) taaGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAgggg < 1:1420686/91‑1 (MQ=255) aaGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGa > 1:2220156/1‑91 (MQ=255) aaGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGa < 1:4110872/91‑1 (MQ=255) aGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGaa < 1:956017/91‑1 (MQ=255) aGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGaa > 1:3371042/1‑91 (MQ=255) aGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGaa > 1:1686132/1‑91 (MQ=255) aGTACTTGCAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAACAGTTCATCCTACAATGCTACTAAAAAAAGGGGaa > 1:1239757/1‑91 (MQ=255) gTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAAt < 1:2797510/91‑1 (MQ=255) gTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAAt > 1:2840920/1‑91 (MQ=255) gTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAAt > 1:2841470/1‑91 (MQ=255) aCTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATgg > 1:3382318/1‑91 (MQ=255) aCTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATgg > 1:3382268/1‑91 (MQ=255) cTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGa > 1:1325754/1‑91 (MQ=255) tGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAAc > 1:1628524/1‑91 (MQ=255) gAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAg > 1:174111/1‑91 (MQ=255) gtaCTAAAAGATTTAATTTTTTAATGCAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGaa > 1:3287946/3‑91 (MQ=38) gCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGaa > 1:232746/1‑91 (MQ=255) gCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGaa > 1:2390094/1‑91 (MQ=255) taCTAAAAGATTTAATTTTTTAGTGCAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGaaa > 1:4030201/2‑91 (MQ=38) taCTAAAAGATTTAATTTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGaaa > 1:1254927/2‑91 (MQ=39) cACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGaaa < 1:4038991/91‑1 (MQ=255) cACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGaaa < 1:2335227/91‑1 (MQ=255) attAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAAt < 1:831229/89‑1 (MQ=255) aCTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAAt < 1:3915553/91‑1 (MQ=255) cTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATg > 1:1651854/1‑91 (MQ=255) cTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATg < 1:2654696/91‑1 (MQ=255) aaaaTTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGatat < 1:1360714/91‑1 (MQ=255) aaaTTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATAtt > 1:1333062/1‑91 (MQ=255) aaTTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATAttt < 1:1523401/91‑1 (MQ=255) | TTTATTTAATTTAATAATCAATGAGAGTCTTTCAAACTTCGATTTAGAATATGCTTCATACAATAAATAAGTACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTT > USA300TCH1516_ALE/2754640‑2754818 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |