| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 770,860 | G→A | 8.6% | intergenic (+46/‑204) | ybaK → / → glcR | Cys‑tRNA(Pro)/Cys‑tRNA(Cys) deacylase YbaK/HTH‑type transcriptional repressor GlcR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 770,860 | 0 | G | A | 8.6% | 376.5 / 17.9 | 116 | intergenic (+46/‑204) | ybaK/glcR | Cys‑tRNA(Pro)/Cys‑tRNA(Cys) deacylase YbaK/HTH‑type transcriptional repressor GlcR |
| Reads supporting (aligned to +/- strand): ref base G (58/48); new base A (3/7); total (61/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 122 total aligned reads displayed.
ATTACAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATT > USA300TCH1516_ALE/770770‑770950 | aTTACAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGTAGTGTGACagag < 1:3181258/91‑1 (MQ=255) ttACAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAgaga < 1:3791931/91‑1 (MQ=255) tACAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGAt < 1:1800984/91‑1 (MQ=255) tACAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGAt < 1:174729/91‑1 (MQ=255) aCAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATg > 1:3952550/1‑91 (MQ=255) aCAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATg > 1:82282/1‑91 (MQ=255) cAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGa > 1:798652/1‑91 (MQ=255) aaTAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGaa > 1:2382181/1‑91 (MQ=255) aTAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGaaa > 1:3881393/1‑91 (MQ=255) aaCTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAAtt < 1:3092150/91‑1 (MQ=255) cTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAAtttt > 1:1678237/1‑91 (MQ=255) tAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAAttttt > 1:1043052/1‑91 (MQ=255) aaaGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTta > 1:1053117/1‑91 (MQ=255) aaGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTtat > 1:2768853/1‑91 (MQ=255) ggCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATaa < 1:1068958/91‑1 (MQ=255) cAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATaaaa < 1:2715617/91‑1 (MQ=255) aaaaTTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGGGTGTGACAGAGATGAAATTTTTATAAAAt > 1:2346438/1‑91 (MQ=255) aaaaTTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAAt > 1:2722207/1‑91 (MQ=255) aaaaTTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAAt < 1:2874325/91‑1 (MQ=255) aaaaTTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAAt < 1:2874804/91‑1 (MQ=255) aaaTTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAAtt > 1:3750028/1‑91 (MQ=255) aaaTTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAAATGAATTTTATA‑AAAAttt < 1:579528/91‑2 (MQ=37) aaTTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTc < 1:3084588/91‑1 (MQ=255) aaTTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTc < 1:1010887/91‑1 (MQ=255) aaTTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTc > 1:550457/1‑91 (MQ=255) aTTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCa < 1:1926359/91‑1 (MQ=255) aTTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCa < 1:3431038/91‑1 (MQ=255) ttGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCAt < 1:485071/91‑1 (MQ=255) tGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCAtt > 1:746115/1‑91 (MQ=255) gAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTc > 1:930279/1‑91 (MQ=255) gAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTc > 1:121657/1‑91 (MQ=255) gCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTg > 1:1993397/1‑91 (MQ=255) cAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGc > 1:2112570/1‑91 (MQ=255) gTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGGCAGAAATGAATTTTATAAAAATTTCATCTCTgtca < 1:3099896/91‑4 (MQ=17) gTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCca < 1:934096/91‑1 (MQ=255) ttATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCcac < 1:378467/91‑1 (MQ=255) tATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGGCAGAAATGAATTTTATAAAAATTTCATCTCTGTcaca < 1:1753057/91‑1 (MQ=14) aTCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCacac > 1:2232223/1‑91 (MQ=255) aTCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCacac > 1:1133654/1‑91 (MQ=255) ccATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTc < 1:3239499/91‑1 (MQ=255) cATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGGCAGAAATGAATTTTATAAAAATTTCATCTCTGTCACACTcc < 1:497038/91‑1 (MQ=14) cATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTcc < 1:4104396/91‑1 (MQ=255) tgaatgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCtt < 1:2934184/91‑1 (MQ=255) gaatgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCttt < 1:2326469/91‑1 (MQ=255) gaatgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCttt < 1:4027861/91‑1 (MQ=255) aatgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGGCAGAAATGAATTTTATAAAAATTTCATCTCTGTCACACTCCtaat < 1:2582593/91‑4 (MQ=2) aatgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCtttt < 1:3189800/91‑1 (MQ=255) aatgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCtttt > 1:243119/1‑91 (MQ=255) aatgaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCtttt > 1:1852017/1‑91 (MQ=255) gaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTttga < 1:1640639/91‑1 (MQ=255) gaTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTttga > 1:3818351/1‑91 (MQ=255) aTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTttgat < 1:1399048/91‑1 (MQ=255) aTTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTttgat > 1:3571537/1‑91 (MQ=255) aataaCAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTttgattga > 1:1018175/1‑91 (MQ=255) ataaCAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGaa > 1:1972601/1‑91 (MQ=255) ataaCAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGaa > 1:3935935/1‑91 (MQ=255) ataaCAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGaa > 1:1970447/1‑91 (MQ=255) taaCAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAAt < 1:3411534/91‑1 (MQ=255) aacaacAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAAtt < 1:3112305/91‑1 (MQ=255) aacaacAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAAtt < 1:337186/91‑1 (MQ=255) aacaacAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAAtt < 1:336878/91‑1 (MQ=255) acaacaAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTa > 1:496747/1‑91 (MQ=255) caaAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCAt > 1:969945/1‑91 (MQ=255) caaAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCAt > 1:1737287/1‑91 (MQ=255) aaaaaGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCAtt < 1:4020534/91‑1 (MQ=255) aGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTAc < 1:2246148/91‑1 (MQ=255) aGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTAc < 1:2245523/91‑1 (MQ=255) aGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTAc < 1:3160809/91‑1 (MQ=255) aTGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGAt > 1:2104325/1‑91 (MQ=255) tGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATc > 1:1571222/1‑91 (MQ=255) ggggCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCa > 1:2593080/1‑91 (MQ=255) ggggCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCa > 1:510064/1‑91 (MQ=255) ggggCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCa > 1:510250/1‑91 (MQ=255) ggggCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCa > 1:2336528/1‑91 (MQ=255) gggCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCAt < 1:2166830/91‑1 (MQ=255) gggCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCAt < 1:2166780/91‑1 (MQ=255) ggCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATa > 1:513040/1‑91 (MQ=255) ttACGAGTGCGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTc < 1:3727446/91‑1 (MQ=255) aGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCAt < 1:1999169/91‑1 (MQ=255) aGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCAt < 1:3772122/91‑1 (MQ=255) aGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCAt > 1:2663868/1‑91 (MQ=255) ggAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCAtt > 1:1139591/1‑91 (MQ=255) ggAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCAtt < 1:911528/91‑1 (MQ=255) gAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATta > 1:322715/1‑91 (MQ=255) gAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATta < 1:1178726/91‑1 (MQ=255) aGTGTGGCAGAAATGAATTTTATAAAAATTTCATCTCTGTCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATtat > 1:1802078/1‑91 (MQ=14) aGTGTGGCAGAAATGAATTTTATAAAAATTTCATCTCTGTCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATtat > 1:83481/1‑91 (MQ=14) gtgACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAAt < 1:4020385/91‑1 (MQ=255) gtgACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAAt < 1:4020387/91‑1 (MQ=255) tgACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAAtt < 1:3200977/91‑1 (MQ=255) tgACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAAtt < 1:3198840/91‑1 (MQ=255) gACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTg < 1:2960081/91‑1 (MQ=255) gACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTg < 1:1381512/91‑1 (MQ=255) gACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTg < 1:1381638/91‑1 (MQ=255) aCAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGa < 1:4112789/91‑1 (MQ=255) cAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAg > 1:10473/1‑91 (MQ=255) cAGAAATGAATTTTATAAAAATTTCATCTCTGTCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAg > 1:3009693/1‑91 (MQ=18) gaTGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTAtt > 1:140868/1‑91 (MQ=255) gaTGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTAtt > 1:2607177/1‑91 (MQ=255) gaTGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTAtt > 1:2184089/1‑91 (MQ=255) | ATTACAATAACTAAAGGCAAAATTGGAGCAGTTATCCATGAATGATTAATAACAACAAAAAGTATGGGGCAAGATTAGGAGTGTGACAGAGATGAAATTTTTATAAAATTCATTTCTGCCACACTCCTTTTTGATTGAATTAGCATTTTACGATCATAAACAGTCATTATAATTGAGTATT > USA300TCH1516_ALE/770770‑770950 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |