Predicted mutation
evidence seq id position mutation annotation gene description
RA CP000731 81 N→G intergenic (–/‑151) – / → repA –/replication protein A

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000731810NG98.2% 391.2 / NA 112intergenic (–/‑151)–/repA–/replication protein A
Reads supporting (aligned to +/- strand):  ref base N (0/0);  major base G (64/46);  minor base T (1/1);  total (65/47)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 112 total aligned reads displayed.

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTANAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAATATGGAAAGAGGTTTTT  >  CP000731/1‑227
                                                                                                                                                 |                                                                                                                                                  
gtttatgatatttatcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGaa                                                                                                                                                  >  1:631244‑M1/66‑148 (MQ=255)
 tttaggatatttatcaagggtttataaacccgtgataaagctatattttgtccattgtaagttgATTTAGAGTGCTATAATAAACTTAATATAACAAAACCCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGaaa                                                                                                                                                 >  1:145223‑M1/65‑148 (MQ=255)
   tatgatatttatcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACt                                                                                                                                               >  1:469186‑M1/63‑148 (MQ=255)
   tatgatatttatcaagggtttataaaaccttgataaagctacagtttcccttttataagtttATTTAAAGGGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACt                                                                                                                                               >  1:115881‑M1/63‑148 (MQ=255)
    atgatatttatcaagggtttataaacccttgataaagctatattttcccttttataagtctATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCTGGGTCTGGTAATAAAACGTTTAGAAACTg                                                                                                                                              >  1:325931‑M1/62‑148 (MQ=255)
      gatatttatcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGtt                                                                                                                                            <  1:442898‑M1/89‑1 (MQ=255)
      gatatttatcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGtt                                                                                                                                            >  1:631027‑M1/60‑148 (MQ=255)
           ttatcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGtttattt                                                                                                                                       >  1:541340‑M1/55‑148 (MQ=255)
           ttatcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGtttattt                                                                                                                                       >  1:524970‑M1/55‑148 (MQ=255)
            tatcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGtttattta                                                                                                                                      >  1:284848‑M1/54‑148 (MQ=255)
              tcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTATAAACTGTTTATTtata                                                                                                                                    <  1:58697‑M1/97‑1 (MQ=255)
              tcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTtata                                                                                                                                    >  1:245786‑M1/52‑148 (MQ=255)
                 agggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATaa                                                                                                                                 <  1:369488‑M1/100‑1 (MQ=255)
                     tttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATATACTTAAGATAACAAAAACCCCAACTACTGGTAATAGTCGGAGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAAtttt                                                                                                                             <  1:303480‑M1/104‑1 (MQ=255)
                      ttataaacccttgataaagctatattttccctgttataagtttATGTAAAGTGCAATAATATAGAAGATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAattttt                                                                                                                            <  1:304533‑M1/105‑2 (MQ=255)
                         taaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATACAACGTTTAGAAACTGTTTATCTATATAATTTTCGAt                                                                                                                         >  1:401353‑M1/41‑148 (MQ=255)
                          aaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATa                                                                                                                        <  1:157205‑M1/109‑1 (MQ=255)
                          aaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATa                                                                                                                        <  1:249904‑M1/109‑1 (MQ=255)
                          aaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATa                                                                                                                        <  1:97001‑M1/109‑1 (MQ=255)
                           aacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATAc                                                                                                                       <  1:172489‑M1/110‑1 (MQ=255)
                           aacccttgataaagctatattttcccctttataagcttATGTAAAGGGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTATAAACTGTTTATTTATATAATTTTCGATAc                                                                                                                       >  1:327862‑M1/39‑148 (MQ=255)
                            acccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACt                                                                                                                      >  1:14648‑M1/38‑148 (MQ=255)
                              ccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTg                                                                                                                    <  1:19711‑M1/113‑1 (MQ=255)
                               cttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGt                                                                                                                   >  1:123904‑M1/35‑148 (MQ=255)
                                 tgataaagctatattttcccttttataattttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGtat                                                                                                                 >  1:184033‑M1/33‑148 (MQ=255)
                                 tgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATCGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGtat                                                                                                                 >  1:183933‑M1/33‑148 (MQ=255)
                                 tgataaagatatatgttcgcttttataagtttATTTAAAGTGCTACCAGAAACGGAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGtat                                                                                                                 >  1:557842‑M1/33‑148 (MQ=255)
                                      aagctatcttttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATAATTGTATtatat                                                                                                            <  1:242289‑M1/121‑1 (MQ=255)
                                       agctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATtatata                                                                                                           >  1:631235‑M1/27‑148 (MQ=255)
                                       agctatattttcccttttataagattATTTAAAGTGCTATAATAACCTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATtatata                                                                                                           >  1:629925‑M1/27‑148 (MQ=255)
                                           atattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGa                                                                                                       >  1:404647‑M1/23‑148 (MQ=255)
                                            tattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGaa                                                                                                      <  1:580564‑M1/127‑1 (MQ=255)
                                            tattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATAATTGTATTATTTAATGaa                                                                                                      <  1:556520‑M1/127‑1 (MQ=255)
                                             attttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGaat                                                                                                     >  1:379429‑M1/21‑148 (MQ=255)
                                               tttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTCTTTATATAATTTTCGATACTTGTATTATATAATGaataa                                                                                                   <  1:293468‑M1/130‑1 (MQ=255)
                                               tttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGaataa                                                                                                   <  1:100748‑M1/130‑1 (MQ=255)
                                                 tcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAataata                                                                                                 >  1:421578‑M1/17‑148 (MQ=255)
                                                  cccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAatat                                                                                                >  1:536494‑M1/16‑148 (MQ=255)
                                                   ccttttatacatttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATc                                                                                               >  1:3097‑M1/15‑148 (MQ=255)
                                                    cttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCt                                                                                              <  1:258526‑M1/135‑1 (MQ=255)
                                                     ttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATTTAATGAATAATATCtt                                                                                             <  1:577227‑M1/136‑1 (MQ=255)
                                                      tttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATAAATAATATCTTa                                                                                            <  1:242723‑M1/137‑1 (MQ=255)
                                                      tttaaaagtttATTTAAAGAGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTa                                                                                            >  1:6312‑M1/12‑148 (MQ=255)
                                                       ttataagtctAGTTAAATTTCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAg                                                                                           >  1:517448‑M1/11‑148 (MQ=255)
                                                         ataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGACTAATATCTTAGTg                                                                                         <  1:157607‑M1/140‑1 (MQ=255)
                                                         ataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTg                                                                                         >  1:514533‑M1/9‑148 (MQ=255)
                                                          taagtttATTTAGAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTAGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATTATTTTAGATACTTGTATTATATAATGAGTAATATCTTAGTGc                                                                                        <  1:446360‑M1/141‑1 (MQ=255)
                                                           aagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCAATACTTGTATTATATAATGAATAATATCTTAGTGCa                                                                                       <  1:520730‑M1/142‑1 (MQ=255)
                                                              tttaTTTAAAGTGCTATAATGAACTTAATATAACAAAAACCCCAACTACTGGTACTAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTGTCGATTCTTGTATTATATAATGAATAACATCTTAGTGCAAGc                                                                                    >  1:446562/4‑148 (MQ=255)
                                                              tttATTTAAAGTGCTATAATAAACTTAATATAACACAAACCCCAACTCCTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGACAATGTTTCTTTATATAATTTTAGATACTTGTGTTATCTAATGAATAATATCTTCGTGTAAGc                                                                                    <  1:604413‑M1/145‑1 (MQ=255)
                                                              tttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGc                                                                                    <  1:568038‑M1/145‑1 (MQ=255)
                                                                 aTTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACGGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATCTAATGAATAATAACTTAGTGCAAGCAcc                                                                                 <  1:397511/148‑1 (MQ=255)
                                                                      aaGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAAt                                                                            <  1:416331/148‑1 (MQ=255)
                                                                      aaGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGAAAACAACGAAAt                                                                            >  1:4795/1‑148 (MQ=255)
                                                                      aaGGGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAAt                                                                            <  1:474585/148‑1 (MQ=255)
                                                                        gTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCa                                                                          <  1:288123/148‑1 (MQ=255)
                                                                               aataaACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCTAGCACCTAAATCGTtacaaa                                                                   >  1:113565/1‑144 (MQ=255)
                                                                                ataaACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCAataaataa                                                                  >  1:185747/1‑148 (MQ=255)
                                                                                ataaACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATtaaataa                                                                  <  1:135485/148‑1 (MQ=255)
                                                                                 taaACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCATGCACCTAAATCATtaaataaa                                                                 >  1:294571/1‑148 (MQ=255)
                                                                                 taaACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATtaaataaa                                                                 <  1:474728/148‑1 (MQ=255)
                                                                                   aaCTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATg                                                               <  1:610303/148‑1 (MQ=255)
                                                                                      ttAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAGTCAAAAGTTTAGAAACTGTTTATTTATATAAGTTTCGATGCTAGCCTTCCAGATGGTAGAATAGTTTAGTGCAAGCACCTAGATCATGAAATAAATGTaa                                                            >  1:119665/1‑148 (MQ=255)
                                                                                       tAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTaaa                                                           <  1:124282/148‑1 (MQ=255)
                                                                                            taACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGAACCTAAATCATTAAATAAATGTAAAGCtaa                                                      >  1:311679/1‑148 (MQ=255)
                                                                                             aaCAAAAACCCCAACTACTGGTAGTAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaa                                                     >  1:471986/1‑148 (MQ=255)
                                                                                             aaCAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaa                                                     >  1:525241/1‑148 (MQ=255)
                                                                                              aCAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaat                                                    >  1:388407/1‑148 (MQ=255)
                                                                                              aCAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaat                                                    >  1:435982/1‑148 (MQ=255)
                                                                                              aCAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaat                                                    >  1:50263/1‑148 (MQ=255)
                                                                                              aCAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaat                                                    >  1:357444/1‑148 (MQ=255)
                                                                                               cAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaata                                                   <  1:440889/148‑1 (MQ=255)
                                                                                               cAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaata                                                   >  1:264863/1‑148 (MQ=255)
                                                                                                aaaaaCCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGGTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAAGAAATGTAAAGCtaaataa                                                  >  1:289108/1‑148 (MQ=255)
                                                                                                  aaaCCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATaaaa                                                <  1:551272/148‑1 (MQ=255)
                                                                                                  aaaCCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATATAAATCTAAATaaaa                                                >  1:554285/1‑148 (MQ=255)
                                                                                                    aCCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAAc                                              <  1:451842/148‑1 (MQ=255)
                                                                                                       ccAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACAGTAGATGTATATAATATGCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACATAAATCATTCAATCAATGTAACGCTAAATAAAAATGtt                                           >  1:60217/1‑148 (MQ=255)
                                                                                                         aaCTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGtttt                                         <  1:236524/148‑1 (MQ=255)
                                                                                                         aaCCACTGGTAATAGGCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGtttt                                         <  1:60998/148‑1 (MQ=255)
                                                                                                           ctaatGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTttat                                       <  1:162857/148‑1 (MQ=255)
                                                                                                               tGGTAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAAGGGTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTAcc                                   >  1:435106/1‑148 (MQ=255)
                                                                                                                  tAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACctct                                >  1:529550/1‑148 (MQ=255)
                                                                                                                  tAATAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACctct                                >  1:261942/1‑148 (MQ=255)
                                                                                                                  tAATAGTCGGGGTTTGGTAATAAAACGGTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATATTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAACTAAAAACGTTTTATTACctct                                >  1:282454/1‑148 (MQ=255)
                                                                                                                    aTAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTa                              <  1:154733/148‑1 (MQ=255)
                                                                                                                     tAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTAc                             <  1:496804/148‑1 (MQ=255)
                                                                                                                     tAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTAc                             <  1:181670/148‑1 (MQ=255)
                                                                                                                     tAGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAAAGTTTTATTACCTCTTAc                             >  1:532462/1‑148 (MQ=255)
                                                                                                                      aGTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTAcc                            >  1:338679/1‑148 (MQ=255)
                                                                                                                       gTCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCa                           >  1:548743/1‑148 (MQ=255)
                                                                                                                        tCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGGAAAATGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATAACCTCTTACCaa                          >  1:333615/1‑148 (MQ=255)
                                                                                                                        tCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCaa                          >  1:414843/1‑148 (MQ=255)
                                                                                                                        tCGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCaa                          >  1:414990/1‑148 (MQ=255)
                                                                                                                         cGGGGTTTGGTAATAAAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATGAATGTAGAGCTAAATAAAAACGTTTTATTACCTCTTACCaac                         >  1:74077/1‑147 (MQ=255)
                                                                                                                            ggTTTGGTAATAATACGTTTAGAAACGATTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCGTTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTa                      <  1:359288/148‑1 (MQ=255)
                                                                                                                                    aataaAACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAATTACAAACGTTTTATTACCTCTTACCAAACTAAAATATgg              >  1:189158/1‑148 (MQ=255)
                                                                                                                                             tttAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAATATGGAAAGAGGtt     <  1:8127/148‑1 (MQ=255)
                                                                                                                                             tttAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAATATGGAAAGAGGtt     <  1:441927/148‑1 (MQ=255)
                                                                                                                                                aGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAATATGGAAAGAGGttttt  <  1:53840/148‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAAAACGTTTANAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAATATGGAAAGAGGTTTTT  >  CP000731/1‑227

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑