| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | = 4419 | 2 (0.610) | 30 (0.030) | 11/264 | 0.1 | 2.9% | intergenic (+384/‑81) | USA300HOU_pUSA300HOUMR0006/cadR | hypothetical protein/cadmium binding protein |
| ? | NC_012417 | = 1946 | 1982 (0.900) | intergenic (+179/+147) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 252 total aligned reads displayed.
TTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAGTTATAATACATTCAAAAATATTTTTGAATGAGGTGTATTATGATTCAAACGGTTGTTGCTGCTGCTGTTCTTTATATTGCTACAGCAGTTGATTTATTA > CP000731/4279‑4559 | tttATGCCGATAAAATTTATTGATGTTGAGAACAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAA < 1:254764‑M1/141‑1 (MQ=255) tccaattgcTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAAtt > 1:40831‑M1/10‑141 (MQ=255) ccaattgcTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTg > 1:927890‑M1/9‑141 (MQ=255) aaaaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCATCGTCAATAAAGCAATTGGAAT < 2:96171‑M1/141‑1 (MQ=255) aaaaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACTTCAATAAAGCAATTGGAAT < 2:53415‑M1/141‑1 (MQ=255) aaaaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAAT < 1:573212‑M1/141‑1 (MQ=255) aaaaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAAT < 1:955681‑M1/141‑1 (MQ=255) aaaaTTTATTGAGTGTGATAAGAGCCCTTAACTAAACTGGCATACGAAGGTCGGCAGAGCGTTAGCGATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAAT < 1:785236‑M1/141‑1 (MQ=255) aaaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATA < 1:898505‑M1/141‑1 (MQ=255) aaaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATA < 1:972254‑M1/141‑1 (MQ=255) aaaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATA < 1:412743‑M1/141‑1 (MQ=255) aaaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATA > 1:65795‑M1/1‑141 (MQ=255) aaaTTTATTGATGTTGAGAAAAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGACCACCATTCGACAATTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATA < 2:242116‑M1/141‑1 (MQ=255) aaaTTTATCGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATA < 2:247736‑M1/141‑1 (MQ=255) aaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGATAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAA < 1:759986‑M1/141‑1 (MQ=255) aaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAA > 1:302487‑M1/1‑141 (MQ=255) aaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAA < 1:819075‑M1/141‑1 (MQ=255) aaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAA < 2:79341‑M1/141‑1 (MQ=255) aaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAA < 1:910304‑M1/141‑1 (MQ=255) aTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAA > 1:350465‑M1/1‑141 (MQ=255) aTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAA > 1:278128‑M1/1‑141 (MQ=255) aTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAA < 1:446888‑M1/141‑1 (MQ=255) aTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATCTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAA < 1:166619‑M1/141‑1 (MQ=255) tttATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAt > 1:511000‑M1/1‑140 (MQ=255) gagaAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAttttctcggcataaatgcgtcgtctat > 1:316256‑M1/1‑114 (MQ=255) aagaaCCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAttttctcgacataaatgcgtcgtctatttt > 1:871129‑M1/1‑111 (MQ=255) tAACTAAACTTGCAGACGAATGTAGGCATAGCGTGAGCTATTAAGCAGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAAttttctcggcataaatgagtagtcagttttttattatcttca > 1:503726‑M1/1‑99 (MQ=255) aCTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatg > 2:195833‑M1/1‑97 (MQ=255) cTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatga > 2:117802‑M1/1‑96 (MQ=255) cTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAATTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatga > 2:164191‑M1/1‑96 (MQ=255) tAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAtgcgtcgtctattttttattatcttcatg > 1:561397‑M1/1‑112 (MQ=255) aaaCTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgata > 1:198159‑M1/1‑94 (MQ=255) cTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAgcaattggaataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagc < 1:72833‑M1/141‑77 (MQ=255) ccGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAGTTATAATACATTCAAAAATATTTTTGAATGAGGTGTATTATGATTCAAACGGTTGTTGCTGCTGCTGTTCTTTATATTg > 1:86306/1‑141 (MQ=255) tCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaac > 1:237625‑M1/1‑8 (MQ=255) tCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaac > 2:395391‑M1/1‑8 (MQ=255) tCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaac > 2:222750‑M1/1‑8 (MQ=255) tCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaac > 1:532897‑M1/1‑8 (MQ=255) tCAATAAAttttctcggcataaatgcgtcgtctattttttattatcgtcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaac > 2:344270‑M1/1‑8 (MQ=255) cAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaaca > 2:2636‑M1/1‑7 (MQ=255) aaTAAAttttctcggcgtaaatgcgtcgtctattgtttattatctacatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag < 2:184481‑M1/141‑136 (MQ=255) aaTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag > 1:859129‑M1/1‑6 (MQ=255) aaTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag > 2:214060‑M1/1‑6 (MQ=255) aaTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag > 1:842595‑M1/1‑6 (MQ=255) aaTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag > 1:156448‑M1/1‑6 (MQ=255) aaTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag > 1:118825‑M1/1‑6 (MQ=255) aaTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag > 2:114606‑M1/1‑6 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagt > 1:541904‑M1/1‑5 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagt > 1:773512‑M1/1‑5 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagt > 1:231381‑M1/1‑5 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagt > 2:25800‑M1/1‑5 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagt > 2:43325‑M1/1‑5 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagt > 1:95995‑M1/1‑5 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctagtaaaacgcatcatctttataaaaaaacaaaaaataagcaacaacaccaataggaataaaaaaacagt > 2:271454‑M1/1‑5 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatggttcatccatcgcgtcaaaaacaacatcatgatagaaaaacaaaaagtaagcaacaacaccaatagaaataaaaaaacagt > 2:315276‑M1/1‑5 (MQ=255) tAAAttttctcggtataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg < 1:980863‑M1/141‑138 (MQ=255) tAAAttttctcggcataaattcttcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg < 1:749897‑M1/141‑138 (MQ=255) tAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg > 1:782328‑M1/1‑4 (MQ=255) tAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg > 1:222820‑M1/1‑4 (MQ=255) tAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg < 1:188060‑M1/141‑138 (MQ=255) tAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg < 1:370933‑M1/141‑138 (MQ=255) tAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg > 1:422955‑M1/1‑4 (MQ=255) tAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg < 1:627154‑M1/141‑138 (MQ=255) tAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg > 1:613120‑M1/1‑4 (MQ=255) tAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg < 2:33330‑M1/141‑138 (MQ=255) tAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg < 1:463575‑M1/141‑138 (MQ=255) tAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg < 2:151566‑M1/141‑138 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattttcttcaggatagtcatagttttcttttatctttttaatagcatcatctgtatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgt > 1:442570‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgt < 1:308998‑M1/141‑139 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgt > 2:240575‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgt > 2:322670‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgt > 1:838050‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgt > 1:485876‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgt < 1:603917‑M1/141‑139 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgt > 1:937864‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgt > 1:675437‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgt < 1:917241‑M1/141‑139 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgt > 2:37537‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgg > 1:537604‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtga > 2:27991‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaa > 1:345775‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgccaaaagcatcatctttatagaaaaacaaaaagtaaccaacaacacccataggaataaaaaaacggggt > 1:356780‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttcaatatcgtcaaaagcataatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgt > 2:121042‑M1/1‑3 (MQ=255) aaattttatcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgt > 1:780004‑M1/1‑3 (MQ=255) aattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtg > 2:65849‑M1/1‑2 (MQ=255) aattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtg < 2:420784‑M1/141‑140 (MQ=255) aattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtg < 1:801070‑M1/141‑140 (MQ=255) aattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtg < 1:887362‑M1/141‑140 (MQ=255) aattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtg < 1:882063‑M1/141‑140 (MQ=255) aattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtg > 1:79578‑M1/1‑2 (MQ=255) aattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtg < 1:665779‑M1/141‑140 (MQ=255) aattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtg > 1:319877‑M1/1‑2 (MQ=255) aattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtg > 1:21615‑M1/1‑2 (MQ=255) aattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttcaatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataaaaataaaaaaacagtgtg < 2:306382‑M1/141‑140 (MQ=255) attttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaacacagtctta > 1:583169‑M1/1‑1 (MQ=255) attttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtga < 2:177509‑M1/141‑141 (MQ=255) attttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtga < 1:968267‑M1/141‑141 (MQ=255) attttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtga < 2:38417‑M1/141‑141 (MQ=255) attttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtga > 1:704984‑M1/1‑1 (MQ=255) attttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtga < 1:126589‑M1/141‑141 (MQ=255) | TTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAGTTATAATACATTCAAAAATATTTTTGAATGAGGTGTATTATGATTCAAACGGTTGTTGCTGCTGCTGTTCTTTATATTGCTACAGCAGTTGATTTATTA > CP000731/4279‑4559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |