| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | = 4433 | 2 (0.610) | 13 (0.010) | 5/270 | 0.1 | 1.3% | intergenic (+398/‑67) | USA300HOU_pUSA300HOUMR0006/cadR | hypothetical protein/cadmium binding protein |
| ? | NC_012417 | = 1931 | 1958 (0.870) | intergenic (+164/+162) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAGTTATAATACATTCAAAAATATTTTTGAATGAGGTGTATTATGATTCAAACGGTTGTTGCTGCTGCTGTTCTTTATATTGCTACAGCAGTTGATTTATTAGTAATTTTATTAAT > CP000731/4293‑4573 | aTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAA < 1:446888‑M1/141‑1 (MQ=255)aTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAA > 1:278128‑M1/1‑141 (MQ=255)aTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAA > 1:350465‑M1/1‑141 (MQ=255)aTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAA < 1:264077‑M1/141‑1 (MQ=255)aTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATCTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAA < 1:166619‑M1/141‑1 (MQ=255) tttATTGCTGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAt > 1:781457‑M1/1‑140 (MQ=255) tttATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAt > 1:511000‑M1/1‑140 (MQ=255) tttATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAt > 1:602323‑M1/1‑140 (MQ=255) tttATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAt < 1:702162‑M1/141‑2 (MQ=255) tttATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAt > 1:287413‑M1/1‑140 (MQ=255) tttATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAt > 1:567349‑M1/1‑140 (MQ=255) tttATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAt > 1:863727‑M1/1‑140 (MQ=255) tttATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAt > 2:242297‑M1/1‑140 (MQ=255) tAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAtgcgtcgtctattttttattatcttcatg > 1:561397‑M1/1‑112 (MQ=255) tCGGCATAGCTTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACTTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAGTTATAATACATTCAAAAata < 2:314373/141‑1 (MQ=255) ccGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAGTTATAATACATTCAAAAATATTTTTGAATGAGGTGTATTATGATTCAAACGGTTGTTGCTGCTGCTGTTCTTTATATTg > 1:86306/1‑141 (MQ=255) ggCTCAACGTCAATAAAGCAATTGGAATAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaat < 1:195653‑M1/141‑111 (MQ=255) ggCTCAACGTCAATAAAGCAATTGGAATAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaat > 1:961776‑M1/1‑31 (MQ=255) aaGCAATTGGAATAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtga < 1:183752‑M1/141‑126 (MQ=255) aTTGGAATAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaaca > 1:47719‑M1/1‑11 (MQ=255) aTAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaactacaccaataggaataaaaaaacagtgtgaaaacaagaaga < 1:812672‑M1/141‑137 (MQ=255) aTAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagtaataaaaaaacagtgtgaaaacaagaaga < 1:861189‑M1/141‑137 (MQ=255) aTAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaaga > 1:544619‑M1/1‑5 (MQ=255) aTAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaaga < 1:879334‑M1/141‑137 (MQ=255) aTAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaaga < 1:530272‑M1/141‑137 (MQ=255) aTAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaaga < 2:214998‑M1/141‑137 (MQ=255) aTAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaaga < 2:84332‑M1/141‑137 (MQ=255) aTAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaaga < 1:11560‑M1/141‑137 (MQ=255) aTAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaaga > 1:135417‑M1/1‑5 (MQ=255) aTAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaaga < 1:37647‑M1/141‑137 (MQ=255) aTAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaaga < 1:187308‑M1/141‑137 (MQ=255) aTAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaaaaagaaga > 1:147007‑M1/1‑5 (MQ=255) aTAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaaacagtgtgaaaacaagaag > 1:72652‑M1/1‑5 (MQ=255) aTAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccaactcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaaaaacaccaataggaataaaaaaacagtgtgaaaacaagaaga < 1:912045‑M1/141‑137 (MQ=255) aTAAAtgagtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaaga < 1:162444‑M1/141‑137 (MQ=255) tAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaa > 2:93010‑M1/1‑4 (MQ=255) tAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaa > 2:52722‑M1/1‑4 (MQ=255) tAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaa < 2:421872‑M1/141‑138 (MQ=255) tAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaa > 1:128525‑M1/1‑4 (MQ=255) tAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaa < 1:871990‑M1/141‑138 (MQ=255) tAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaa > 1:817784‑M1/1‑4 (MQ=255) tAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaa < 1:600098‑M1/141‑138 (MQ=255) tAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaa < 1:570142‑M1/141‑138 (MQ=255) tAAAtgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgagaaaacaagaagaa > 1:512246‑M1/1‑4 (MQ=255) aaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaa > 1:788297‑M1/1‑3 (MQ=255) aaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaa < 1:530250‑M1/141‑139 (MQ=255) aaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaa > 2:189552‑M1/1‑3 (MQ=255) aaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaa < 1:93370‑M1/141‑139 (MQ=255) aaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaa > 1:933042‑M1/1‑3 (MQ=255) aatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaac < 1:628022‑M1/141‑140 (MQ=255) aatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaac < 2:90854‑M1/141‑140 (MQ=255) aatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaac < 2:422296‑M1/141‑140 (MQ=255) aatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaac > 2:307451‑M1/1‑2 (MQ=255) aatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaac > 2:221638‑M1/1‑2 (MQ=255) aatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaac < 1:336917‑M1/141‑140 (MQ=255) aatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaac < 1:979340‑M1/141‑140 (MQ=255) aatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaac < 1:97369‑M1/141‑140 (MQ=255) aatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaac < 1:308544‑M1/141‑140 (MQ=255) aatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaac > 1:263047‑M1/1‑2 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaagaagtacgcatcaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact > 1:462963‑M1/1‑1 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtcagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact < 1:497495‑M1/141‑141 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact > 1:251540‑M1/1‑1 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact > 1:470030‑M1/1‑1 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact < 2:82746‑M1/141‑141 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact > 2:75303‑M1/1‑1 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact < 1:296651‑M1/141‑141 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact > 1:740176‑M1/1‑1 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact > 2:282356‑M1/1‑1 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact < 1:79433‑M1/141‑141 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact > 1:32201‑M1/1‑1 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact > 1:582282‑M1/1‑1 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact > 2:185134‑M1/1‑1 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact < 2:112269‑M1/141‑141 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact > 1:987153‑M1/1‑1 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact > 1:209093‑M1/1‑1 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact > 1:577199‑M1/1‑1 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact > 1:153948‑M1/1‑1 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact < 1:320733‑M1/141‑141 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagaaataaaaaaacagtgtgaaaacaaaaagaaact > 1:10959‑M1/1‑1 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagaaccaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact < 1:224516‑M1/141‑141 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcataatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact > 2:101908‑M1/1‑1 (MQ=255) atgcgtcgtctattttttattatcttcatgataatcatatttttctcccatctcgtcaaaagaatcatctttatagcaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtgaaaacaagaagaaact < 1:93451‑M1/141‑141 (MQ=255) | ATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAGTTATAATACATTCAAAAATATTTTTGAATGAGGTGTATTATGATTCAAACGGTTGTTGCTGCTGCTGTTCTTTATATTGCTACAGCAGTTGATTTATTAGTAATTTTATTAAT > CP000731/4293‑4573 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |