Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000731	1015	1141	127	2 [1]	[1] 2	repA	replication protein A

ATGCTATTGCAAGAATTCCCAGAACAACTAACTAATTATTTATTAAAATATGATTATAGAGATTTAGAAATCATAAAGGCTGTTATTCTTAAAGCAAAAAAATCATTTAATTCAAGGCATGAAGATATGCATTACATGTTAGAGGAC  >  CP000731/874‑1020                                                                                                                                             |       aTGCTATTGCAAGAATTCCCAGAACAACTAACTAATTATTTATTAAAATATGATTATAGAGATTTAGAAATCATAAAGGCTGTTATTCTTAAAGCAAAAAAATCATTTAATTCAAGGCATGAAGATATGCATTACATGTTa        <  2:240938/141‑1 (MQ=255)       ttGCAAGAATTCCCAGAACAACTAACTAATTATTTATTATAATATGATTATAGAGATTTAGAAATCATAAAGGCTGTTATTCTTAAAGCAAAAAAATCATTTAATTCAAGGCATGAAGATATGCATTACATGTTAGAGGAc  <  2:358070/141‑1 (MQ=255)                                                                                                                                             |       ATGCTATTGCAAGAATTCCCAGAACAACTAACTAATTATTTATTAAAATATGATTATAGAGATTTAGAAATCATAAAGGCTGTTATTCTTAAAGCAAAAAAATCATTTAATTCAAGGCATGAAGATATGCATTACATGTTAGAGGAC  >  CP000731/874‑1020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑