Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000731	24155	24310	156	2 [1]	[0] 2	USA300HOU_pUSA300HOUMR0029/USA300HOU_pUSA300HOUMR0030	macrolide 2'‑phosphotransferase/Sin recombinase

TGATAGAGATGACCTTCAAATGAACGGTTCTGTTACAAAGAAAAAATCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAA  >  CP000731/24311‑24451 |                                                                                                                                             tGATAGAGATGACCTTCAAATGAACGGTTCTGTTACAAAGAAAAAATCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTaa  >  1:317925/1‑141 (MQ=255) tGATAGAGATGACCTTCAAATGAACGGTTCTGTTACAAAGAAAAAATCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTaa  >  1:861335/1‑141 (MQ=255) |                                                                                                                                             TGATAGAGATGACCTTCAAATGAACGGTTCTGTTACAAAGAAAAAATCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAA  >  CP000731/24311‑24451

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑