Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000731	1646	1880	235	2 [1]	[1] 2	repA/USA300HOU_pUSA300HOUMR0003	replication protein A/hypothetical protein

TTTAAAGTATTTTATGCTAATTTTTAAATTTGCATGTAAATGGGCAGTATCTAAAAAATTAGTCACTGATTTTGCTGAAATTTTTGTTTGTGAAATTAGCATATATTTATTTGGCTCATATTTGCGTTTTAAGAGACTGTATAGATTTTTAAGTACAAAACCTATATGATTTGCCTCTAAGTCTTCAAAATGCCTCTTAAAATCCAAAATAAAAG  >  CP000731/1807‑2021                                                                           |                                                                                                                                             tttAAAGTATTTTATGCTAATTTTTAAATTTGCATGTAAATGGGCAGTATCTAAAAAATTAGTCACTGATTTTGCTGAAATTTTTGTTTGTGAAATTAGCATATATTTATTTGGCTCATATTTGCGTTTTAAGAGACTGta                                                                            <  1:269139/141‑1 (MQ=255)                                                                           cTGAAATTTTTGTTTGTGAAATTAGCATATATTTATTTGGCTCATATTTGCGTTTTAAGAGACTGTATAGATTTTTAAGTACAAAACCTATATGATTTGCCTCTAAGTCTTCAAAATGCCTCTTAAAATCCAAAATAAAAg  >  1:615717/1‑141 (MQ=255)                                                                           |                                                                                                                                             TTTAAAGTATTTTATGCTAATTTTTAAATTTGCATGTAAATGGGCAGTATCTAAAAAATTAGTCACTGATTTTGCTGAAATTTTTGTTTGTGAAATTAGCATATATTTATTTGGCTCATATTTGCGTTTTAAGAGACTGTATAGATTTTTAAGTACAAAACCTATATGATTTGCCTCTAAGTCTTCAAAATGCCTCTTAAAATCCAAAATAAAAG  >  CP000731/1807‑2021

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑