Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000731	13710	13866	157	2 [1]	[1] 2	USA300HOU_pUSA300HOUMR0016/USA300HOU_pUSA300HOUMR0018	IS257 transposase/3',5' aminoglycoside phosphotransferase

GCAGGAATTATTTTTTTGATTGCAGCTGAATAAGAATAGAGGTTACTCTGTTAATCCTGTTCAAATTTTATTCCTCCTCTGTGACTTCCATAAAAAGTATATCCTATGCGTTCTTAAGCTAGCTGCTGTTAGTGCTTCTCATTGCACCCT  >  CP000731/13858‑14007          |                                                                                                                                             gCAGGAATTATTTTTTTGATTGCAGCTGAATAAGAATAGAGGTTACTCTGTTAATCCTGTTCAAATTTTATTCCTCCTCTGTGACTTCCATAAAAAGTATATCCTATGCGTTCTTAAGCTAGCTGCTGTTAGTGCTTCTCa           <  1:351764/141‑1 (MQ=255)          attTTTTTGATTGCAGCTGAATAAGAATAGAGGTTACTATGTTAATCCTGTTCAAATTTTATTCCTCCTCTGTGACTTCCATAAAAAGTATATCCTATGCGTTCTTAAGCTAGCTGCTGTTAGTGCTTCTCATCGCACCCt  >  2:336187/1‑141 (MQ=255)          |                                                                                                                                             GCAGGAATTATTTTTTTGATTGCAGCTGAATAAGAATAGAGGTTACTCTGTTAATCCTGTTCAAATTTTATTCCTCCTCTGTGACTTCCATAAAAAGTATATCCTATGCGTTCTTAAGCTAGCTGCTGTTAGTGCTTCTCATTGCACCCT  >  CP000731/13858‑14007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑