New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000731 2287 =432 (1.110)4 (0.000) 3/282 36.5 0.42% intergenic (+67/+101) USA300HOU_pUSA300HOUMR0003/USA300HOU_pUSA300HOUMR0004 hypothetical protein/hypothetical protein
?NC_012417 2027 = 1485 (1.100)intergenic (+260/+66) USA300HOU_RS14895/USA300HOU_RS14900 hypothetical protein/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 436 total aligned reads displayed.

TGATATTCATGTATTAGAAATTCAAATACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCATCCAGCTGCAAATGCAGTTCCGCAAACTGCTT  >  CP000731/2142‑2434
                                                                                                                                                 |                                                                                                                                                   
   tatTCATGTATTAGAAATTCAAATAAACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTACTGATCTTTAGAAGAACCCTTAACTAAACTTGCAGACGAATg                                                                                                                                                <  1:605587/148‑1 (MQ=255)
        aTGTATTAGAAATTCAAATACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGAGGAATGTCGGc                                                                                                                                           >  1:250673/1‑148 (MQ=255)
        aTGTATTAGAAATTCAAATACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGc                                                                                                                                           >  1:110098/1‑148 (MQ=255)
        aTGTATTAGAAATTCAAATACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGc                                                                                                                                           >  1:796035/1‑148 (MQ=255)
             ttAGAAATTCAAATACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGCTGCGAGTAACCCTGTACTAAACTTGCAGACGAATGACGGCATAGc                                                                                                                                      >  1:650671/1‑148 (MQ=37)
                 aaaTTCAAATACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAGCTTGCAGACGAATGTCGGCATAGCGTGa                                                                                                                                  >  1:148522/1‑148 (MQ=255)
                 aaaTTCAAATACACAGTAATTGGTTAGATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTgg                                                                                                                                  >  1:665043/1‑147 (MQ=255)
                  aaTTCAAATACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAg                                                                                                                                 >  1:1024051/1‑148 (MQ=255)
                  aaTTCAAATACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAg                                                                                                                                 >  1:192650/1‑148 (MQ=255)
                  aaTTCAAATACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAg                                                                                                                                 >  1:781613/1‑148 (MQ=255)
                  aaTTCAAATACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAg                                                                                                                                 <  1:1122786/148‑1 (MQ=255)
                  aaTTCAAATACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAAGAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAg                                                                                                                                 >  1:242215/1‑148 (MQ=255)
                   aTTCAAATACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGc                                                                                                                                <  1:1000512/148‑1 (MQ=255)
                   aTTCAAATACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGc                                                                                                                                >  1:708194/1‑148 (MQ=255)
                   aTTCAAATACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGc                                                                                                                                >  1:952639/1‑148 (MQ=255)
                     tCAAATACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGCATGTCGGCATAGCGTGAGCTa                                                                                                                              <  1:820763/148‑1 (MQ=255)
                      cAAATACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTAt                                                                                                                             >  1:684292/1‑148 (MQ=255)
                          tACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAg                                                                                                                         >  1:205605/1‑148 (MQ=255)
                            cacaGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGcc                                                                                                                       <  1:1039097/148‑1 (MQ=255)
                                        ttATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCAGACCATTCGACa                                                                                                           >  1:260888/1‑148 (MQ=255)
                                          atatatTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAg                                                                                                         >  1:1154378/1‑148 (MQ=255)
                                          atatatTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAg                                                                                                         >  1:185345/1‑148 (MQ=255)
                                            atatTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCAGTCGACAAGtt                                                                                                       >  1:470209/1‑148 (MQ=255)
                                             tatTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTACCTGCGCGCGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGttt                                                                                                      >  1:595370/1‑148 (MQ=18)
                                                ttCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTgg                                                                                                   >  1:892689/1‑148 (MQ=255)
                                                   aGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGGTTTGGGAt                                                                                                >  1:424591/1‑148 (MQ=255)
                                                    gCTATCTTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGAtt                                                                                               <  1:490770/148‑1 (MQ=255)
                                                     cTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTg                                                                                              <  1:415707/148‑1 (MQ=255)
                                                       aTTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGtt                                                                                            <  1:377340/148‑1 (MQ=255)
                                                           ttttttATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTGTGGGATTGTTAAgg                                                                                        >  1:973047/1‑148 (MQ=255)
                                                             ttttATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCTGACTAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATGGTTAAGGGt                                                                                      >  1:291445/1‑148 (MQ=255)
                                                                tATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGGTcc                                                                                   >  1:1069463/1‑148 (MQ=255)
                                                                  tGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGa                                                                                 <  1:827915/148‑1 (MQ=255)
                                                                  tGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGa                                                                                 >  1:1109029/1‑148 (MQ=255)
                                                                   gAGGATAGATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAg                                                                                >  1:860566/1‑148 (MQ=255)
                                                                   gAGGATAAATAAGGAACATCGTATTTAGGCCGAAAAAATTTATTGATGTTGCGAAGAAACCTAAAGTAACCTCGCCGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCTTTAGACAAGTTTTGGGATAGTTAAGGGTTCCGAg                                                                                >  1:760940/1‑148 (MQ=14)
                                                                    aGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTCTTAAGCCAACCATTCGACAAGTTTTCGTGTTGGTAAGGGTTCCGAgg                                                                               >  1:343515/1‑148 (MQ=14)
                                                                     ggATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGc                                                                              >  1:1246031/1‑148 (MQ=255)
                                                                      gATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGGTTGTTAAGGGTTCCGAGGCt                                                                             >  1:403074/1‑148 (MQ=255)
                                                                      gATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCt                                                                             >  1:735633/1‑148 (MQ=255)
                                                                      gATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCt                                                                             >  1:1008458/1‑148 (MQ=255)
                                                                      gATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCt                                                                             >  1:366348/1‑148 (MQ=255)
                                                                      gATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCt                                                                             >  1:1065398/1‑148 (MQ=255)
                                                                      gATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCt                                                                             >  1:22962/1‑148 (MQ=255)
                                                                       ataaataaGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGTGATTGTTAAGGGTTCCGAGGCTc                                                                            <  1:626159/148‑1 (MQ=255)
                                                                        taaataaGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCa                                                                           >  1:479077/1‑148 (MQ=255)
                                                                        taaataaGGAACATCGTATTTATGCCGAAAAAATTTATTCATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCa                                                                           >  1:556999/1‑148 (MQ=255)
                                                                        taaataaGGAAAATGGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCa                                                                           <  1:99061/148‑1 (MQ=255)
                                                                           ataaGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACg                                                                        <  1:1220581/148‑1 (MQ=40)
                                                                           ataaGGAAAATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACg                                                                        <  1:532491/148‑1 (MQ=38)
                                                                             aaGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGACGCCCATTCGAGAAGTTTTGGGGTTGTTAAGGGTTCCGAGGCTCGACGTc                                                                      >  1:387182/1‑148 (MQ=14)
                                                                                gAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAAt                                                                   >  1:33051/1‑148 (MQ=37)
                                                                                 aaCATCGTATTTATGCCGAAAAAATTTATTGATGTTGATAAGAACCCTTAACTAAAATTACAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATa                                                                  >  1:353479/1‑148 (MQ=255)
                                                                                 aaCATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGCGCTATTAAGCCGACCATTCGCCAAGTTTTGGGATTGTTAAGAGTTCCGAGGCTCAACGTCAATa                                                                  >  1:69799/1‑148 (MQ=255)
                                                                                 aaCATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATa                                                                  >  1:879162/1‑148 (MQ=35)
                                                                                 aaCATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATa                                                                  >  1:1136733/1‑148 (MQ=35)
                                                                                  aCATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGTTTCCGAGGCTCAACGTCAATaa                                                                 <  1:630260/148‑1 (MQ=25)
                                                                                  aCATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATaa                                                                 <  1:455282/148‑1 (MQ=35)
                                                                                  aCATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATaa                                                                 >  1:180151/1‑148 (MQ=35)
                                                                                  aCATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATaa                                                                 <  1:1084055/148‑1 (MQ=35)
                                                                                  aCATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATaa                                                                 <  1:641897/148‑1 (MQ=35)
                                                                                  aCATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGAAGATGTATGTCGGAATACTGTGAGGTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCTATaa                                                                 >  1:918587/1‑148 (MQ=11)
                                                                                      cGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACa                                                             >  1:809069/1‑148 (MQ=34)
                                                                                        tATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGACTGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAAt                                                           <  1:722444/148‑1 (MQ=18)
                                                                                        tATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAAt                                                           <  1:56506/148‑1 (MQ=33)
                                                                                          tttATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTg                                                         >  1:101543/1‑148 (MQ=32)
                                                                                          tttATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTg                                                         >  1:749862/1‑148 (MQ=32)
                                                                                          tttATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTg                                                         <  1:83468/148‑1 (MQ=32)
                                                                                           ttATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTgg                                                        <  1:219893/148‑1 (MQ=32)
                                                                                              tGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAAt                                                     >  1:575911/1‑148 (MQ=32)
                                                                                              tGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGAACATTCGACAAGTTTTGGGATTATGAAGGGTTTCGAGGCTCAACGTCAATAAAACAATTGGGAt                                                     >  1:849632/1‑148 (MQ=11)
                                                                                               gCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATa                                                    <  1:1163555/148‑1 (MQ=32)
                                                                                                 cGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATaaa                                                  >  1:1257696/1‑148 (MQ=32)
                                                                                                  gAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATaaaa                                                 >  1:1213136/1‑148 (MQ=32)
                                                                                                     aaaaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCa                                              <  1:695197/148‑1 (MQ=35)
                                                                                                     aaaaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCa                                              <  1:513159/148‑1 (MQ=35)
                                                                                                     aaaaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCa                                              <  1:141127/148‑1 (MQ=35)
                                                                                                      aaaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCaa                                             >  1:1176506/1‑148 (MQ=37)
                                                                                                              tGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACaga                                     <  1:447614/148‑1 (MQ=255)
                                                                                                                 tGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCa                                  >  1:1193947/1‑148 (MQ=255)
                                                                                                                 tGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCa                                  >  1:274007/1‑148 (MQ=255)
                                                                                                                 tGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCa                                  >  1:871309/1‑148 (MQ=255)
                                                                                                                    tGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCACCCTACAGAGCATcc                               >  1:1222162/1‑148 (MQ=255)
                                                                                                                     gagaAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATGGGAATAAAATCAACCTACAGAGCATCCa                              >  1:1117635/1‑148 (MQ=255)
                                                                                                                       gaagaaCCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCATCCAGc                            >  1:1051720/1‑148 (MQ=255)
                                                                                                                         agaaCCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGCCTCAACGTCAATAAAACAATTGGAATAAAATCGACCTCCAGAGCATCCAGCTg                          >  1:960718/1‑148 (MQ=255)
                                                                                                                            aCCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCATCCAGCTGCaa                       >  1:278294/1‑148 (MQ=255)
                                                                                                                             cacTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCATCCAGCTGCaaa                      <  1:680928/146‑1 (MQ=255)
                                                                                                                                ttAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACACGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCATCCAGCTGCAAATGc                   >  1:431911/1‑148 (MQ=255)
                                                                                                                                 tAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCATCCAGCTGCAAATGCa                  >  1:313984/1‑148 (MQ=255)
                                                                                                                                    cTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCATCCAGCTGCAAATGCAGtt               >  1:163759/1‑148 (MQ=255)
                                                                                                                                    cTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCATCCAGCTGCAAATGCAGtt               >  1:939869/1‑148 (MQ=255)
                                                                                                                                    cTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCATCCAGCTGCAAATGCAGtt               >  1:1206875/1‑148 (MQ=255)
                                                                                                                                    cTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTCGGGATTGTTAAGGGCTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAATCAACCTCCAGAGCATCCAGCTGCAAATGCAGtt               >  1:617505/1‑148 (MQ=255)
                                                                                                                                     tAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCATCCAGCTGCAAATGCAGTTc              <  1:1089551/148‑1 (MQ=255)
                                                                                                                                       aaCTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCATCCAGCTGCAAATGCAGTTCCg            <  1:129058/148‑1 (MQ=255)
                                                                                                                                            gCAGACGAATGACGGCATAGCGTGAGCTATTGAGCCGGCCATTCGACAAGTTTTGGGCTACCTAACGTTTCCGCGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCATCCAGCTGCAAATGCAGTTCCGCAAAc       >  1:856296/1‑148 (MQ=21)
                                                                                                                                               gACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTTTGTAAGCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCATCCAGCTGCAAATGCAGTTCCGCAAACTGc    <  1:1237474/148‑1 (MQ=21)
                                                                                                                                                 cGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCATCCAGCTGCAAATGCAGTTCCGCAAACTGCtt  <  1:905382/148‑1 (MQ=255)
                                                                                                                                                 cGAATGTCGGCATAGCCTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCATCCAGCTGCAAATGCAGTTCCGCAAACTGCtt  <  1:738995/148‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
TGATATTCATGTATTAGAAATTCAAATACACAGTAATTGGTTATATATTTCAGCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAACAATTGGAATAAAATCAACCTACAGAGCATCCAGCTGCAAATGCAGTTCCGCAAACTGCTT  >  CP000731/2142‑2434

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.