| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 950,088 | T→A | 16.1% | intergenic (+82/‑280) | yugI_2 → / → USA300HOU_RS04740 | General stress protein 13/putative oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 950,088 | 0 | T | A | 16.1% | 768.4 / 117.0 | 273 | intergenic (+82/‑280) | yugI_2/USA300HOU_RS04740 | General stress protein 13/putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (118/110); new base A (18/26); total (136/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 282 total aligned reads displayed.
AACGACTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAGGTGACATA > USA300TCH1516_ALE/949998‑950178 | gaCGACTAAAGGAACAGATAAATCGTACCGAAAATCCTACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTAt < 2:3920689/90‑1 (MQ=255)aaCGACTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTAt < 1:3628318/91‑1 (MQ=255) aCGACTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTAtt < 2:2362940/91‑1 (MQ=255) cGACTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTa < 2:291203/91‑1 (MQ=255) cGACTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTa > 1:2751727/1‑91 (MQ=255) aCTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTaaa > 1:2096158/1‑91 (MQ=255) tAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAAtt < 2:356549/91‑1 (MQ=255) aaaGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATCAAAGAGATTAGTCTCTATTAAAttt > 2:3538631/1‑91 (MQ=255) aGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTtta < 1:2272006/91‑1 (MQ=255) aCAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATTAAATTTTCTTAGACTATAAAAGAGATTAGTATCTAATAAAATTTAATAg < 2:1334939/91‑1 (MQ=37) aCAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAg < 1:2174147/91‑1 (MQ=255) aCAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTAATAAAATTTAATAg < 2:940310/91‑1 (MQ=38) aTAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATAc > 1:2286233/1‑91 (MQ=255) aTAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTAATAAAATTTAATAGATAc < 2:2096859/91‑1 (MQ=37) tAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTAATAAAATTTAATAGATACt < 1:3092630/91‑1 (MQ=37) tAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTAATAAAATTTAATAGATACt < 1:186193/91‑1 (MQ=37) aaaTCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTAATAAAATTTAATAGATACTa < 2:3650399/91‑1 (MQ=37) aaTCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTaa > 1:1832377/1‑91 (MQ=255) aaTCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTaa > 2:1843314/1‑91 (MQ=255) aaTCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTaa > 1:3269417/1‑91 (MQ=255) aaTCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTaa < 2:2297346/91‑1 (MQ=255) aaTCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTaa < 2:606262/91‑1 (MQ=255) aaTCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTaa < 1:1030183/91‑1 (MQ=255) aaTCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTaa < 1:1637191/91‑1 (MQ=255) aaTCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTAATAAAATTTAATAGATACTaa < 2:3604519/91‑1 (MQ=25) aTCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAAt < 2:3061701/91‑1 (MQ=255) aTCGTACCGAAAATCATACAAAGGGTCTGAAACGAAAGTTTCTTAGACTATCAACGAGATTAGTATCTATTACATTTTATTAGATACTAAt > 2:2855690/1‑91 (MQ=255) tCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAAtc < 1:1356330/91‑1 (MQ=255) acGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTAATAAAATTTAATAGATACTAAtc < 2:3706625/90‑1 (MQ=25) gTACCGAAAATCCTGCCAAGGTTCTGAATTGAAAGTTTCTTAGACTATAAAAGCGAGTAGTTTCTAATAAAATTTAATAGATACTAAtctc < 2:2176738/91‑1 (MQ=16) aCCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCtt > 2:686534/1‑91 (MQ=255) aCCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTAATAAAATTTAATAGATACTAATCTCtt < 2:2957245/91‑1 (MQ=25) ccGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCttt < 2:2067928/91‑1 (MQ=255) cGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCtttt < 1:2702623/91‑1 (MQ=255) cGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCtgtt < 2:2032164/91‑1 (MQ=255) gAAAATCATACAAAGGGTCTGTAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCttttt < 2:1666030/91‑1 (MQ=255) aaaaTCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTg > 2:1596935/1‑91 (MQ=255) aaaaTCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCGTTTTg > 2:3638572/1‑91 (MQ=255) aaTCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTc < 2:1192539/91‑1 (MQ=255) tCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTa < 2:1659339/91‑1 (MQ=255) tCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTACAAAAGAGACTAGTATCTATTATATTTTATTAGATACTAATCTCTTTTTGTCTa > 1:3152275/1‑91 (MQ=38) tCATACAAAGGGTCTGAAATGAAAGTTTCATAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTGTTTGTCTa > 2:3441607/1‑91 (MQ=255) aTACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACg < 1:1424401/91‑1 (MQ=255) aCAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGAt < 2:3041516/91‑1 (MQ=255) aCAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGAt > 1:1823298/1‑91 (MQ=255) aCAAAGGGTCTGAAATGAAAGTTTCTGAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGAt > 2:2251745/1‑91 (MQ=255) cAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATa < 2:265692/91‑1 (MQ=255) aaGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAAc < 1:249575/91‑1 (MQ=255) aGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACg > 1:1748127/1‑91 (MQ=255) gTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTaa > 1:2392177/1‑91 (MQ=255) gTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTaa > 1:3405755/1‑91 (MQ=255) tCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAat < 1:3240945/91‑1 (MQ=255) tCTGAAACGAAAGTTTCTTAGACTATAAAAGAGACTACCACCTATCAAACTTCACTACACACTAATCTCTTCCTGTCTACGATAACGTAat > 2:3944264/1‑91 (MQ=255) cTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAata < 1:3768654/91‑1 (MQ=255) cTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAata < 1:1171668/91‑1 (MQ=255) cTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAata < 2:1401984/91‑1 (MQ=255) tgaaatgaaaGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAatat > 1:318951/1‑91 (MQ=255) atgaaaGTTGCTTAGACTATAAAAGATATTAGTATCTATTGAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATAtgatt < 2:1714919/91‑1 (MQ=255) aaaGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTTTATTTTAATTTAATAtgattgat > 2:748015/1‑91 (MQ=25) aaaGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATAtgattgat < 1:763839/91‑1 (MQ=255) aGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTc > 1:153044/1‑91 (MQ=255) tttCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTa > 1:2250980/1‑91 (MQ=255) ttCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTAt > 1:2556781/1‑91 (MQ=255) tCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTAtt > 1:1666836/1‑91 (MQ=255) cTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTAttt < 1:1465616/91‑1 (MQ=255) cTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTAttt > 2:2565433/1‑91 (MQ=255) aGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTTTCTACGATAACGTAATATGATTGATTCTATTTaca > 2:2897658/1‑91 (MQ=255) aGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTaca < 1:3730438/91‑1 (MQ=255) gACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTacac < 2:3400522/91‑1 (MQ=255) gACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTacac < 1:3308768/91‑1 (MQ=255) aCTATAAAAGAGATTAGTATCTATTAAATTTTTTTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACg < 1:3376108/91‑1 (MQ=255) aCTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACg < 1:197140/91‑1 (MQ=255) cTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGt > 1:105146/1‑91 (MQ=255) cTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGt < 1:2721650/91‑1 (MQ=255) aaaaGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACaa > 1:2961785/1‑91 (MQ=255) aaaaGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACaa < 2:3130369/91‑1 (MQ=255) agagATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATg < 2:272436/91‑1 (MQ=255) agagATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATg < 2:1530098/91‑1 (MQ=255) agagATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATg > 1:1331168/1‑91 (MQ=255) agagATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATg < 2:2956574/91‑1 (MQ=255) agaTTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGt < 1:961390/91‑1 (MQ=255) gaTTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGtt > 1:1852739/1‑91 (MQ=255) aTTAGTATCTAATAAAATTTAATAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGttt > 1:559210/1‑91 (MQ=25) ttAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTa > 1:143816/1‑91 (MQ=255) ttAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTa > 1:550178/1‑91 (MQ=255) tAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTaa > 2:1744822/1‑91 (MQ=255) aGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAg > 1:1259301/1‑91 (MQ=255) aGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAg > 1:2513135/1‑91 (MQ=255) aGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAg > 2:3742257/1‑91 (MQ=255) aGTATCTAATAAAATTTAATAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAg > 1:2777147/1‑91 (MQ=37) aGTATCTAATAAAATTTAATAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAg > 1:848635/1‑91 (MQ=37) gTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAgg < 2:3260708/91‑1 (MQ=255) gTATCTAATAAAATTTAATAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAgg > 1:3593820/1‑91 (MQ=255) tATCTAATAAAATTTAATAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAGGt > 1:1369686/1‑91 (MQ=37) aTCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAGGTg > 2:35870/1‑91 (MQ=255) aTCTAGTAATTTTTAGTAGATACTGATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAGGTg < 1:2339595/91‑1 (MQ=255) tCTAATAAAATTTAATAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAGGTGa > 1:2998895/1‑91 (MQ=37) ccTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAGGTGa > 2:3128212/2‑91 (MQ=255) tATTAAATTTTATTAGATACTAATCTCTTTTTTTTTATTTTTACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAGGTGACa > 2:2404500/1‑91 (MQ=255) ttAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAGGTGACata < 1:3675858/91‑1 (MQ=255) | AACGACTAAAGGAACAGATAAATCGTACCGAAAATCATACAAAGGGTCTGAAATGAAAGTTTCTTAGACTATAAAAGAGATTAGTATCTATTAAATTTTATTAGATACTAATCTCTTTTTGTCTACGATAACGTAATATGATTGATTCTATTTACACGTACAAATGGTTTAAGGTGACATA > USA300TCH1516_ALE/949998‑950178 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |