| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 954,763 | G→A | 7.8% | intergenic (+417/+86) | gluD → / ← glpQ_1 | NAD‑specific glutamate dehydrogenase/Glycerophosphodiester phosphodiesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 954,763 | 0 | G | A | 7.8% | 789.8 / 37.8 | 245 | intergenic (+417/+86) | gluD/glpQ_1 | NAD‑specific glutamate dehydrogenase/Glycerophosphodiester phosphodiesterase |
| Reads supporting (aligned to +/- strand): ref base G (88/137); new base A (8/11); total (97/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.33e-01 | |||||||||||
Only 100 of 254 total aligned reads displayed.
AGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACT > USA300TCH1516_ALE/954673‑954853 | aGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAg > 2:866658/1‑91 (MQ=255)aGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGAAACAAAAAAAAAAAGACAGCAGTAg < 2:1792667/91‑1 (MQ=14) gCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAgg > 1:662337/1‑91 (MQ=255) cTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGa < 2:2421562/91‑1 (MQ=255) ttACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGAt < 1:3137506/91‑1 (MQ=255) aCAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATaa < 2:1925403/91‑1 (MQ=255) aCAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATaa < 1:20035/91‑1 (MQ=255) aTAGTGAGAAAGTTGGGGTGGGACGACGAAATAAATTGTGCGAAAATATCAGTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAAttt < 2:36924/91‑1 (MQ=18) tAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTATGATAATTTc > 2:1113/1‑91 (MQ=255) gtgtGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCaa < 2:3459714/91‑1 (MQ=255) gggtgCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCaa < 2:3459628/89‑1 (MQ=255) tgtgCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAAt > 2:2707123/1‑91 (MQ=255) tgtgCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAAt < 2:2651071/91‑1 (MQ=255) gtgCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAAtt > 1:852116/1‑91 (MQ=255) gtgCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAAtt < 2:3862029/91‑1 (MQ=255) gtgCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAAtt < 1:3093457/91‑1 (MQ=255) tgCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAAttt > 1:2340697/1‑91 (MQ=255) aGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGaa < 2:718058/91‑1 (MQ=255) aGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGaa > 2:2218529/1‑91 (MQ=255) aGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGaa > 1:3824862/1‑91 (MQ=255) aGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTACCAAAAAGACAGCAGTAGGATAATTTCAATTTGGaa < 2:1140862/91‑1 (MQ=255) tGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGCCAGCAGTAGGATAATTTCAATTTGGACata > 2:3562838/1‑91 (MQ=255) tGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAata < 1:3887254/91‑1 (MQ=255) ggggTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAatat < 1:803693/91‑1 (MQ=255) gggTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATc > 2:1345614/1‑91 (MQ=255) gggTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATc > 1:373744/1‑91 (MQ=255) ggTGGGAGGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAAGATATTTCCAAATTGAAATTATcc < 2:3509852/91‑2 (MQ=17) ggTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACCGCAGTAGGATAATTTCAATTAGGAAatatgt > 1:2216962/1‑89 (MQ=255) ggTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCt < 1:2608751/91‑1 (MQ=255) ggTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCt < 2:302685/91‑1 (MQ=255) ggTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAAGATATTTCCAAATTGAAATTATcc < 1:929512/91‑2 (MQ=17) gTGGGACGACGAAATAAATTTTGCGAAGATTTCATTTCTGTCCCACTCAAGAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCtt < 2:3666978/91‑1 (MQ=21) gTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGCCCCACTCCCAAAAAGACAGCAGTAGGCTAATTTCAATTTGGAAATATccc > 2:652858/1‑89 (MQ=255) tGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTa > 1:129749/1‑91 (MQ=255) ggACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTAct > 1:2566455/1‑91 (MQ=255) ggACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTAct < 1:2262156/91‑1 (MQ=255) gacgacGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTaatg < 1:1875280/91‑4 (MQ=255) gacgacGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTActg > 2:2268212/1‑91 (MQ=255) gacgacGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTActg < 2:632348/91‑1 (MQ=255) acgacgAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTActgc < 2:3212824/91‑1 (MQ=255) acgacgAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTActgc < 1:3155631/91‑1 (MQ=255) acgacgAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAAACAGCAGTAAGATATTTCCAAATTGAAATTATCCTActgc < 2:3354671/91‑1 (MQ=14) gacgaAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAAGATATTTCCAAATTGAAATTATCCTActgctg < 1:3374806/91‑1 (MQ=17) gacgaAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAAACAGCAGTAAGATATTTCCAAATTGAAATTATCCTActgctg < 1:1851459/91‑1 (MQ=14) acgaAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAAGATATTTCCAAATTGAAATTATCCTACTGCTGt < 1:3217311/91‑1 (MQ=17) aaataaatTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGtttt < 2:3368161/91‑1 (MQ=255) aaataaatTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGtttt > 2:1639915/1‑91 (MQ=255) ataaatTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTAGCGCTGtttttt > 2:3017930/1‑91 (MQ=255) ataaatTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGtttttt > 2:2770935/1‑91 (MQ=255) ataaatTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGtttttt > 1:13601/1‑91 (MQ=255) taaatTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTta > 2:412666/1‑91 (MQ=255) atTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAg < 2:2957272/91‑1 (MQ=255) ttttGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGt > 1:3725168/1‑91 (MQ=255) gCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATa < 1:2743018/91‑1 (MQ=255) cGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAg < 1:2936568/91‑1 (MQ=255) atatCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCtata < 2:333117/91‑1 (MQ=255) atCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATAtt > 2:36045/1‑91 (MQ=255) tCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATAttt > 2:1844426/1‑91 (MQ=255) aTTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATAttttt > 2:1672047/1‑91 (MQ=255) aTTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATAttttt > 2:46237/1‑91 (MQ=255) tttCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTg < 1:430937/91‑1 (MQ=255) tCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTa < 1:1528672/91‑1 (MQ=255) tCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTa < 2:1797118/91‑1 (MQ=255) tCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTa > 2:2852494/1‑91 (MQ=255) tCTGCCCCACTCCCAAAAAGACATAGGCAGGGTTATATCTGTTTGTAAATATCTTACTGCTGTGTTTTATAGGTATAGTTATATTTTTTTa < 2:2884583/91‑1 (MQ=255) cTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTAt < 1:1638215/91‑1 (MQ=255) cTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTAt < 2:1717916/91‑1 (MQ=255) cTGTCCCACTCCC‑AAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTAtt < 2:3250474/91‑1 (MQ=255) tGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTAtt > 2:910085/1‑91 (MQ=255) tGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTAtt < 1:2032085/91‑1 (MQ=255) tCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTa < 1:1319529/91‑1 (MQ=255) tCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTa < 1:1071995/91‑1 (MQ=255) cccACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTAt < 2:1540299/91‑1 (MQ=255) cccACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTAt < 1:3447669/91‑1 (MQ=255) cccACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTAt < 1:3539409/91‑1 (MQ=255) cccACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTAt < 2:764551/91‑1 (MQ=255) ccACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATg < 1:2739039/91‑1 (MQ=255) cACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGt > 1:2696223/1‑91 (MQ=255) cACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGt < 1:1406453/91‑1 (MQ=255) cACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGt < 2:2521274/91‑1 (MQ=255) acacAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGtttt < 2:3583014/88‑1 (MQ=255) cAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTa < 2:3126395/91‑1 (MQ=255) cAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTa < 2:1437726/91‑1 (MQ=255) taaaaaaCAGCAGTAAGATATTTCCAAATTGAAATTATCCTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAg > 2:3386727/2‑91 (MQ=14) taaaaaaCAGCAGTAAGATATTTCCAAATTGAAATTATCCTACTGCTGTCTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAg > 1:2748415/2‑91 (MQ=0) aaaaGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGt > 1:628432/1‑91 (MQ=255) aaaaGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGt < 1:2402992/91‑1 (MQ=255) aaaaGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGt < 1:70232/91‑1 (MQ=255) aaGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGttt > 1:1731241/1‑91 (MQ=255) aCAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAAc > 1:737700/1‑91 (MQ=255) cagcagTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACa > 2:556376/1‑91 (MQ=255) cagcagTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACa > 2:560304/1‑91 (MQ=255) agcagTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACAt > 1:2371154/1‑91 (MQ=255) cagTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATta < 1:1125318/91‑1 (MQ=255) gggaGGATAATTTCGATGTGGAGATATCTTACTGCTGTTTTTTATAGTAGTAGCTATATTGTTGTAGTTATGTGTTCTAGTTTAACATtac < 2:98773/88‑1 (MQ=255) agTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATtac < 1:3803159/91‑1 (MQ=255) tAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATtacta < 2:3117957/91‑1 (MQ=255) tAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATtacta > 1:3397434/1‑91 (MQ=255) tAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATtacta > 1:1588291/1‑91 (MQ=255) ggATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTactact < 2:2065995/91‑1 (MQ=255) | AGCTTACAATAGTGTGCAAGTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACT > USA300TCH1516_ALE/954673‑954853 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |