| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 954,782 | A→T | 7.9% | intergenic (+436/+67) | gluD → / ← glpQ_1 | NAD‑specific glutamate dehydrogenase/Glycerophosphodiester phosphodiesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 954,782 | 0 | A | T | 7.9% | 808.7 / 41.4 | 241 | intergenic (+436/+67) | gluD/glpQ_1 | NAD‑specific glutamate dehydrogenase/Glycerophosphodiester phosphodiesterase |
| Reads supporting (aligned to +/- strand): ref base A (96/126); new base T (8/11); total (104/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01 | |||||||||||
Only 100 of 255 total aligned reads displayed.
GTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTTATATTT > USA300TCH1516_ALE/954692‑954872 | tGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAata < 1:3887254/91‑1 (MQ=255) tGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAata > 2:3563016/1‑91 (MQ=255) ggggTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAatat < 1:803693/91‑1 (MQ=255) gggTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATc < 1:1826235/91‑1 (MQ=255) gggTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATc > 1:3543587/1‑91 (MQ=255) gggTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATc > 1:2421566/1‑91 (MQ=255) gggTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTAAAAATAAAAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATc < 2:3450174/91‑1 (MQ=21) ggTGGGAGGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAAGATATTTCCAAATTGAAATTATcc < 2:3509852/91‑2 (MQ=17) ggTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCt < 2:302685/91‑1 (MQ=255) ggTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAAGATATTTCCAAATTGAAATTATcc < 1:929512/91‑2 (MQ=17) gTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCtt < 1:1685248/91‑1 (MQ=255) gTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCtt < 1:3447530/91‑1 (MQ=255) tGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTa > 1:129965/1‑91 (MQ=255) gggACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTAc < 2:2895199/91‑1 (MQ=255) gacgacGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTaatg < 1:1875280/91‑4 (MQ=255) gacgacGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTActg < 1:759807/91‑1 (MQ=255) gacgacGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTActg > 2:2268212/1‑91 (MQ=255) acgacgAAATAAATTTTGCGAAAATATCATTTTTGTCCCACTCCCAAAAAGACAGCAGTAAGATATTTCCAAATTTAAATTATCCTActgc < 1:3368200/91‑1 (MQ=12) acgacgAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTActgc < 2:3212824/91‑1 (MQ=255) cgacgaAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTActgct < 1:728301/91‑1 (MQ=255) gacgaAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAAACAGCAGTAAGATATTTCCAAATTGAAATGATCCTActgctg < 1:3029723/91‑1 (MQ=9) cgaAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGtt > 1:3486307/1‑91 (MQ=255) cgaAATAAATGTTGCGAAAATATCATTTCTGTCCCACTCCAAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGtt < 2:2852727/91‑1 (MQ=255) aaataaatTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGtttt > 2:1639915/1‑91 (MQ=255) aaataaatTTTGCGAAAATATCATTTCTGTACAAATAAAAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGtttt < 2:3367894/91‑1 (MQ=37) aataaatTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGttttt < 1:2148865/91‑1 (MQ=255) ataaatTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGtttttt > 2:2770935/1‑91 (MQ=255) ataaatTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGtttttt > 1:13601/1‑91 (MQ=255) ataaatTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTAGAAATATCTTAGTGCTGtttttt > 2:3018014/1‑91 (MQ=255) taaatTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTta > 2:412323/1‑91 (MQ=255) aaatTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTtat < 1:2231995/91‑1 (MQ=255) ttGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTaa > 1:3731351/1‑91 (MQ=255) gCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATa > 2:1922343/1‑91 (MQ=255) gAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGc > 2:2503723/1‑91 (MQ=255) gAAAATATCATTTCTGTCACACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGc < 2:2082659/91‑1 (MQ=255) atatCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCtata < 2:334720/91‑1 (MQ=255) tCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATAttt > 2:1844426/1‑91 (MQ=255) cATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATAtttt > 2:138187/1‑91 (MQ=255) cATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATAtttt < 2:3302073/91‑1 (MQ=255) aTTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATAttttt > 2:1672047/1‑91 (MQ=255) aTTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATAttttt > 2:46237/1‑91 (MQ=255) aTTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATAttttt > 2:656114/1‑91 (MQ=255) tttCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTg < 1:430937/91‑1 (MQ=255) tCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTa < 2:1796419/91‑1 (MQ=255) cTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTAt < 2:1717916/91‑1 (MQ=255) cTGTCCCACTCCC‑AAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTAtt < 2:3250474/91‑1 (MQ=255) tGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTAtt > 2:910085/1‑91 (MQ=255) tCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTa < 1:1071995/91‑1 (MQ=255) tCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTa < 1:2672271/91‑1 (MQ=255) cccACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTAt < 2:1540299/91‑1 (MQ=255) cccACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTAt < 2:764551/91‑1 (MQ=255) cccACGTCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTAt < 2:3638043/91‑1 (MQ=255) ccACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATg > 2:3717954/1‑91 (MQ=255) ccACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATg < 1:2739316/91‑1 (MQ=255) ccACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATg < 1:2739039/91‑1 (MQ=255) cACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGt > 1:2696223/1‑91 (MQ=255) cACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGt < 1:1406453/91‑1 (MQ=255) cAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTa < 2:3126252/91‑1 (MQ=255) cAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTa > 2:650340/1‑91 (MQ=255) taaaaaaCAGCAGTAAGATATTTCCAAATTGAAATTATCCTACTGCTGTCTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAg > 1:2748415/2‑91 (MQ=0) aaaaGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGt > 1:692766/1‑91 (MQ=255) aCAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAAc < 2:3584281/91‑1 (MQ=255) cagcagTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACa > 2:1286982/1‑91 (MQ=255) cagcagTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACa > 2:556376/1‑91 (MQ=255) cagcagTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACa > 2:560304/1‑91 (MQ=255) cagcagTAGGATAATTTCAATTTGGAAATATCTCACTACTGTTTTTCATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACa > 1:3153435/1‑91 (MQ=255) cagcagTAAGATATTTCCAAATTGAAATTATCCTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACa > 2:2414620/1‑91 (MQ=17) agcagTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACAt > 1:2371154/1‑91 (MQ=255) gcagTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACAtt < 1:1249491/91‑1 (MQ=255) gcagTAAGATATTTCCAAATTGAAATTATCCTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACAtt > 1:19252/1‑91 (MQ=18) cagTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATta < 1:3783890/91‑1 (MQ=255) cagTAAGATATTTCCAAATTGAAATTATCCTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATta > 2:1462288/1‑91 (MQ=18) agTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATtac < 1:3803159/91‑1 (MQ=255) gcaGGATAATTTCAATTTGGAAATATCTTACTGCTGTCTTTTCTAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATtact > 2:966704/3‑91 (MQ=255) gTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATtact < 1:2605759/91‑1 (MQ=255) tAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATtacta < 2:3117957/91‑1 (MQ=255) tAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATtacta > 1:1588334/1‑91 (MQ=255) tAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATtacta > 1:3397173/1‑91 (MQ=255) gATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACtt < 1:3057867/91‑1 (MQ=255) tAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTaa < 1:1585617/91‑1 (MQ=255) tttCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGa < 1:1043163/91‑1 (MQ=255) tttCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGa < 2:3842461/91‑1 (MQ=255) tttCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGa > 2:1410984/1‑91 (MQ=255) ttCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGAc < 2:2803126/91‑1 (MQ=255) tCAATTTGGAAATATCTTACTGCTGTTTTTTTTTTTTTTTGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGAct > 2:2446578/1‑91 (MQ=255) cAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGActt > 1:3221584/1‑91 (MQ=255) aaTTTGGAAATATCTTACTGCTGTTTTTTGTAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGActtc < 1:3172843/91‑1 (MQ=255) aaTTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGActtc > 1:1751990/1‑91 (MQ=255) aaTTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGActtc < 2:2969945/91‑1 (MQ=255) aTTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGActtct > 1:913339/1‑91 (MQ=255) aTTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGActtct > 1:2358193/1‑91 (MQ=255) tGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTta < 2:3662900/91‑1 (MQ=255) tGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTta < 2:3181860/91‑1 (MQ=255) ggAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATCTTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTtat > 2:224206/1‑91 (MQ=255) ggAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTTTTTTTTTTTTTTCTAGTTTAACATTACTACTTAATGACTTCTTtat > 2:3376647/1‑91 (MQ=255) ggAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTtat > 1:2552718/1‑91 (MQ=255) ggAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTtat > 1:44962/1‑91 (MQ=255) ggAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTtat > 2:254757/1‑91 (MQ=255) gAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTTTATTTATTTTTTCTAGTTTAACATTACTACTTAATGACTTCTTtatt > 2:475000/1‑90 (MQ=255) gAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTtata < 1:2895137/91‑1 (MQ=255) | GTTGGGGTGGGACGACGAAATAAATTTTGCGAAAATATCATTTCTGTCCCACTCCCAAAAAGACAGCAGTAGGATAATTTCAATTTGGAAATATCTTACTGCTGTTTTTTATAGTAATAGCTATATTTTTGTATTTATGTTTTCTAGTTTAACATTACTACTTAATGACTTCTTTATATTT > USA300TCH1516_ALE/954692‑954872 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |